Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn020s41494 Nelumbo nucifera HOM05D003165 ORTHO05D003589 4.2e-27 124.0 65 100.0
PSO548G0059 Papaver somniferum HOM05D003165 ORTHO05D003589 4.3e-24 114.0 62 95.2
CSS0048851 Camellia sinensis var. sinensis HOM05D003165 ORTHO05D003589 6.2e-23 110.2 65 89.2
Hma1.2p1_4210F.1_g338473 Hydrangea macrophylla HOM05D003165 ORTHO05D003589 3.1e-22 107.8 65 87.7
Lalb_Chr07g0192871 Lupinus albus HOM05D003165 ORTHO05D003589 9.0e-22 106.3 65 81.5
DCAR_032467 Daucus carota HOM05D003165 ORTHO05D003589 2.0e-21 105.1 62 87.1
Potri.013G138100 Populus trichocarpa HOM05D003165 ORTHO05D003589 4.5e-21 104.0 65 83.1
Medtr4g050880 Medicago truncatula HOM05D003165 ORTHO05D003589 1.3e-20 102.4 62 83.9
RcHm_v2.0_CPg0502501 Rosa chinensis HOM05D003165 ORTHO05D003589 1.7e-20 102.1 65 84.6
Gohir.1Z049480 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.8e-20 100.9 62 85.5
Gohir.A04G039135 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.8e-20 100.9 62 85.5
Gohir.A01G139684 Gossypium hirsutum HOM05D003165 ORTHO05D003589 4.9e-20 100.5 62 83.9
Zm00001eb435330 Zea mays HOM05D003165 ORTHO05D003589 4.9e-20 100.5 65 83.1
Zm00001eb435800 Zea mays HOM05D003165 ORTHO05D003589 4.9e-20 100.5 65 83.1
Zm00001eb436880 Zea mays HOM05D003165 ORTHO05D003589 4.9e-20 100.5 65 83.1
Zm00001eb437300 Zea mays HOM05D003165 ORTHO05D003589 4.9e-20 100.5 65 83.1
Zm00001eb437760 Zea mays HOM05D003165 ORTHO05D003589 4.9e-20 100.5 65 83.1
Zm00001eb438270 Zea mays HOM05D003165 ORTHO05D003589 4.9e-20 100.5 65 83.1
Zm00001eb435610 Zea mays HOM05D003165 ORTHO05D003589 1.4e-19 99.0 65 81.5
Os11g0592350 Oryza sativa ssp. japonica HOM05D003165 ORTHO05D003589 3.2e-19 97.8 62 82.3
Gorai.009G320900 Gossypium raimondii HOM05D003165 ORTHO05D003589 4.2e-19 97.4 62 80.6
HanXRQChr01g0011841 Helianthus annuus HOM05D003165 ORTHO05D003589 5.5e-19 97.1 65 83.1
CAN.G210.10 Capsicum annuum HOM05D003165 ORTHO05D003589 9.3e-19 96.3 62 80.6
CAN.G612.7 Capsicum annuum HOM05D003165 ORTHO05D003589 9.3e-19 96.3 62 80.6
CAN.G741.20 Capsicum annuum HOM05D003165 ORTHO05D003589 9.3e-19 96.3 62 80.6
CARHR281860 Cardamine hirsuta HOM05D003165 ORTHO05D003589 1.6e-18 95.5 62 80.6
arahy.Tifrunner.gnm1.ann1.IBW0TW Arachis hypogaea HOM05D003165 ORTHO05D003589 2.1e-18 95.1 61 80.3
Migut.D01333 Erythranthe guttata HOM05D003165 ORTHO05D003589 2.7e-18 94.7 65 81.5
Migut.G00430 Erythranthe guttata HOM05D003165 ORTHO05D003589 2.7e-18 94.7 65 81.5
HanXRQChr00c0126g0571841 Helianthus annuus HOM05D003165 ORTHO05D003589 2.7e-18 94.7 65 81.5
HanXRQCPg0579761 Helianthus annuus HOM05D003165 ORTHO05D003589 2.7e-18 94.7 65 81.5
CAN.G43.5 Capsicum annuum HOM05D003165 ORTHO05D003589 3.5e-18 94.4 63 76.2
arahy.Tifrunner.gnm1.ann1.CR1XRQ Arachis hypogaea HOM05D003165 ORTHO05D009557 4.6e-18 94.0 60 80.0
BolC2t10577H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BolC7t41029H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BolSC37t60775H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BolSC45t60883H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BolSC45t60931H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BolSC46t60980H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BolSC49t61204H Brassica oleracea HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BraA07t28392Z Brassica rapa HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BraSC151t45688Z Brassica rapa HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
BraSC59t46517Z Brassica rapa HOM05D003165 ORTHO05D003589 4.6e-18 94.0 62 79.0
SalBow1G5840 Salvia bowleyana HOM05D003165 ORTHO05D003589 1.0e-17 92.8 62 82.3
Sed0022707 Sechium edule HOM05D003165 ORTHO05D003589 1.0e-17 92.8 62 80.6
SalBow3G1661 Salvia bowleyana HOM05D003165 ORTHO05D003589 1.3e-17 92.4 62 82.3
SalBow3G1899 Salvia bowleyana HOM05D003165 ORTHO05D003589 1.3e-17 92.4 62 82.3
CAN.G612.9 Capsicum annuum HOM05D003165 ORTHO05D003589 1.8e-17 92.0 62 77.4
GSVIVG01037458001 Vitis vinifera HOM05D003165 ORTHO05D003589 1.8e-17 92.0 62 77.4
BolSC29t60523H Brassica oleracea HOM05D003165 ORTHO05D003589 3.0e-17 91.3 60 78.3
CAN.G68.4 Capsicum annuum HOM05D003165 ORTHO05D003589 5.1e-17 90.5 62 72.6
Solyc00g500049.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.1e-17 90.5 59 78.0
Solyc00g500132.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.1e-17 90.5 59 78.0
Solyc00g500202.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.1e-17 90.5 59 78.0
Solyc00g500331.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 5.1e-17 90.5 59 78.0
HanXRQChr17g0546761 Helianthus annuus HOM05D003165 ORTHO05D003589 6.7e-17 90.1 61 80.3
PGR111G0090 Punica granatum HOM05D003165 ORTHO05D003589 6.7e-17 90.1 62 80.6
Gohir.D03G053280 Gossypium hirsutum HOM05D003165 ORTHO05D003589 8.7e-17 89.7 57 82.5
Solyc00g500293.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 1.9e-16 88.6 57 78.9
ATCG00070 Arabidopsis thaliana HOM05D003165 ORTHO05D003589 2.5e-16 88.2 62 75.8
Hund07985 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund08203 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund08798 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund11180 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund12720 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund12847 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund19323 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund22544 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund22777 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund26849 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27475 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27650 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27674 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27695 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27740 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27809 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27837 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27879 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27888 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27933 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund27948 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28041 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28062 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28127 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28256 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28320 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28326 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28533 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28601 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28648 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28774 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28899 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28908 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28967 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28986 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28990 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28995 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund28999 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29003 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29045 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29066 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29158 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29224 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29236 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29258 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29295 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29298 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29301 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29304 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29322 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29329 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29346 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29658 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund29688 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund30268 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund30351 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund30506 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund31022 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
Hund31232 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.4e-14 81.6 60 76.7
LjContig00318g0024148 Lotus japonicus HOM05D003165 ORTHO05D003589 5.3e-14 80.5 58 70.7
CAN.G485.2 Capsicum annuum HOM05D003165 ORTHO05D003589 4.5e-13 77.4 60 70.0
Hund27862 Selenicereus undatus HOM05D003165 ORTHO05D003589 1.3e-12 75.9 48 79.2
Hund01831 Selenicereus undatus HOM05D003165 ORTHO05D003589 1.7e-12 75.5 59 72.9
Lsat_1_v5_gn_5_110781 Lactuca sativa HOM05D000743 ORTHO05D003589 2.9e-12 74.7 58 72.4
Peaxi162Scf00219g00034 Petunia axillaris HOM05D003165 ORTHO05D003589 5.0e-12 73.9 57 70.2
CAN.G364.3 Capsicum annuum HOM05D003165 ORTHO05D003589 1.1e-11 72.8 62 64.5
Nn8g39535 Nelumbo nucifera HOM05D003165 ORTHO05D003589 2.5e-11 71.6 51 76.5
Gohir.1Z050692 Gossypium hirsutum HOM05D003165 ORTHO05D003589 9.3e-11 69.7 40 87.5
arahy.Tifrunner.gnm1.ann1.5MH7M9 Arachis hypogaea HOM05D003165 ORTHO05D003589 2.1e-10 68.6 46 73.9
MD03G1146700 Malus domestica HOM05D003165 ORTHO05D003589 1.8e-09 65.5 39 84.6
Hund29292 Selenicereus undatus HOM05D003165 ORTHO05D003589 1.3e-07 59.3 37 78.4
Glyma.12G095600 Glycine max HOM05D003165 ORTHO05D003589 1.1e-06 56.2 65 52.3
Gohir.A08G117233 Gossypium hirsutum HOM05D003165 ORTHO05D003589 4.1e-06 54.3 59 52.5
TPR.G13282 Trifolium pratense HOM05D003165 ORTHO05D003589 5.3e-06 53.9 37 67.6


User provided reference genes

Program Settings