Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.0e-103 379.0 180 100.0
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.5e-98 362.1 171 100.0
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 6.7e-91 337.4 171 90.1
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.1e-90 336.7 171 91.2
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.5e-90 336.3 170 89.4
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 2.5e-90 335.5 171 91.2
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 4.3e-90 334.7 171 90.6
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 5.6e-90 334.3 171 90.6
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 7.4e-90 334.0 171 90.6
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.6e-89 332.8 171 89.5
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.1e-89 332.4 171 89.5
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 2.8e-89 332.0 171 90.1
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.6e-89 331.6 171 90.6
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 3.6e-89 331.6 171 89.5
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 4.8e-89 331.3 171 87.1
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 6.2e-89 330.9 171 89.5
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 8.1e-89 330.5 171 89.5
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.1e-88 330.1 171 88.9
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.1e-88 330.1 171 88.9
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.4e-88 329.7 171 88.3
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.4e-88 329.7 171 88.3
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.8e-88 329.3 171 87.1
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 4.0e-88 328.2 171 88.3
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 4.0e-88 328.2 177 87.6
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 5.3e-88 327.8 171 88.9
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 5.3e-88 327.8 171 89.5
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 6.9e-88 327.4 171 87.1
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 6.9e-88 327.4 171 88.9
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 6.9e-88 327.4 171 88.9
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 6.9e-88 327.4 171 86.5
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 9.0e-88 327.0 173 88.4
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.2e-87 326.6 171 88.9
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.5e-87 326.2 171 88.3
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 1.5e-87 326.2 171 86.5
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 2.0e-87 325.9 171 86.5
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 2.0e-87 325.9 171 86.5
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 2.0e-87 325.9 177 86.4
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 4.5e-87 324.7 171 87.1
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 4.5e-87 324.7 170 89.4
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 5.8e-87 324.3 171 86.5
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 7.6e-87 323.9 171 86.0
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 7.6e-87 323.9 171 85.4
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 9.9e-87 323.6 171 87.1
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 1.3e-86 323.2 171 86.5
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.3e-86 323.2 171 85.4
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.3e-86 323.2 171 85.4
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.3e-86 323.2 171 88.3
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 1.7e-86 322.8 171 86.0
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 2.2e-86 322.4 171 85.4
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 3.8e-86 321.6 171 86.5
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 3.8e-86 321.6 171 84.8
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 6.4e-86 320.9 171 87.7
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 8.4e-86 320.5 171 85.4
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 8.4e-86 320.5 171 87.7
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.1e-85 320.1 171 85.4
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.1e-85 320.1 171 84.2
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.1e-85 320.1 171 86.5
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.4e-85 319.7 171 83.0
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 3.2e-85 318.5 171 85.4
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.2e-85 318.5 171 86.5
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 3.2e-85 318.5 171 85.4
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 4.2e-85 318.2 171 84.8
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 5.5e-85 317.8 171 85.4
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 9.3e-85 317.0 171 82.5
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 9.3e-85 317.0 171 82.5
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 9.3e-85 317.0 171 84.2
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 9.3e-85 317.0 171 87.1
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 9.3e-85 317.0 171 84.8
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.2e-84 316.6 171 86.0
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 1.2e-84 316.6 171 86.5
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.6e-84 316.2 171 82.5
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.6e-84 316.2 171 83.6
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 2.1e-84 315.8 171 82.5
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 2.7e-84 315.5 171 83.0
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 4.6e-84 314.7 171 81.9
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 4.6e-84 314.7 158 90.5
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 4.6e-84 314.7 171 81.3
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 6.0e-84 314.3 171 84.2
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.0e-83 313.5 171 83.0
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 1.0e-83 313.5 197 76.6
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.0e-83 313.5 171 83.6
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 1.3e-83 313.2 171 83.0
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.3e-83 312.4 191 77.5
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.9e-83 311.6 146 100.0
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 6.7e-83 310.8 179 83.8
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 6.7e-83 310.8 172 82.0
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 8.7e-83 310.5 173 82.7
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.5e-82 309.7 172 83.1
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.5e-82 308.9 171 81.9
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 5.6e-82 307.8 171 81.9
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 5.6e-82 307.8 171 81.9
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 5.6e-82 307.8 158 88.6
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 1.3e-81 306.6 171 81.9
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.3e-81 306.6 171 81.9
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 2.8e-81 305.4 171 80.7
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 2.8e-81 305.4 171 80.7
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.8e-81 305.4 171 84.2
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.8e-81 305.4 171 84.2
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 3.7e-81 305.1 171 80.7
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 4.8e-81 304.7 200 72.5
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.4e-80 302.4 157 88.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.1e-80 302.0 171 79.5
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 3.1e-80 302.0 171 79.5
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 3.1e-80 302.0 171 80.1
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 9.0e-80 300.4 171 78.9
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.6e-79 298.9 202 70.8
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 4.9e-78 294.7 194 72.2
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.4e-77 293.1 174 78.7
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 7.4e-74 280.8 171 76.0
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 2.1e-73 279.3 171 76.0
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 2.8e-73 278.9 173 76.3
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.2e-71 273.5 171 76.6
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.2e-71 273.5 171 76.6
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.5e-71 271.6 171 76.0
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.5e-71 271.6 171 76.6
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 4.5e-71 271.6 171 74.3
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 1.1e-69 266.9 171 77.2
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 5.5e-69 264.6 171 72.5
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 6.7e-67 257.7 175 69.7
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.9e-66 256.1 175 69.1
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 4.1e-56 221.9 176 63.1
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 3.4e-55 218.8 116 87.1
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 3.9e-51 205.3 154 66.2
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 9.7e-50 200.7 171 57.9
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 8.8e-43 177.6 95 84.2
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 3.7e-33 145.6 76 82.9
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 6.5e-30 134.8 135 54.8
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 4.0e-27 125.6 171 42.7
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 7.0e-24 114.8 61 82.0
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 5.2e-19 98.6 84 58.3
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 1.2e-15 87.4 49 73.5
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 1.1e-11 74.3 71 52.1


User provided reference genes

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