Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn010s41441 Nelumbo nucifera HOM05D006976 ORTHO05D008761 3.2e-26 120.9 58 100.0
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 3.2e-26 120.9 58 100.0
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 9.2e-26 119.4 58 96.6
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 9.2e-26 119.4 58 96.6
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 2.7e-25 117.9 58 94.8
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 3.5e-25 117.5 58 96.6
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 4.6e-25 117.1 58 94.8
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 4.6e-25 117.1 58 94.8
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 4.6e-25 117.1 58 93.1
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 5.9e-25 116.7 58 93.1
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.3e-24 115.5 58 93.1
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.0e-24 114.4 58 93.1
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 3.9e-24 114.0 58 91.4
arahy.Tifrunner.gnm1.ann1.L37WZG Arachis hypogaea HOM05D006976 ORTHO05D008761 5.0e-24 113.6 58 93.1
Nn265s45957 Nelumbo nucifera HOM05D006976 ORTHO05D008761 5.0e-24 113.6 54 100.0
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 6.6e-24 113.2 58 91.4
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 1.1e-23 112.5 58 94.8
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.5e-23 112.1 58 91.4
QL93p0999_0001 Quercus lobata HOM05D006976 ORTHO05D008761 1.9e-23 111.7 57 93.0
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 3.3e-23 110.9 58 91.4
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 4.3e-23 110.5 58 91.4
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 1.2e-22 109.0 58 91.4
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 2.8e-22 107.8 57 89.5
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 6.2e-22 106.7 58 84.5
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 8.0e-22 106.3 58 84.5
MD08G1223200 Malus domestica HOM05D006976 ORTHO05D008761 1.0e-21 105.9 58 84.5
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 1.0e-21 105.9 58 86.2
Migut.D01165 Erythranthe guttata HOM05D006976 ORTHO05D008761 1.8e-21 105.1 58 82.8
Glyma.07G028150 Glycine max HOM05D006976 ORTHO05D008761 2.3e-21 104.8 58 86.2
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 3.1e-21 104.4 58 84.5
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 1.2e-20 102.4 58 79.3
GSVIVG01037398001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.2e-20 102.4 56 85.7
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 3.4e-20 100.9 50 94.0
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.3e-19 99.0 49 91.8
HanXRQChr09g0247681 Helianthus annuus HOM05D006976 ORTHO05D008761 1.3e-19 99.0 52 86.5
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 4.9e-19 97.1 50 90.0
Eucgr.I00197 Eucalyptus grandis HOM05D006976 ORTHO05D008761 6.4e-19 96.7 52 84.6
SEGI_11203 Sequoiadendron giganteum HOM05D006976 ORTHO05D008761 8.3e-19 96.3 58 77.6
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 1.1e-18 95.9 49 91.8
Gorai.012G112700 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.1e-18 95.9 50 88.0
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.4e-18 94.7 49 93.9
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.1e-18 94.0 50 90.0
Gohir.D04G084920 Gossypium hirsutum HOM05D000806 ORTHO05D002324 7.0e-18 93.2 50 90.0
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 9.2e-18 92.8 44 97.7
Glyma.14G104700 Glycine max HOM05D006976 ORTHO05D008761 1.2e-17 92.4 58 79.3
Gorai.012G094700 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.6e-17 92.0 50 88.0
Nitab4.5_0002181g0030 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.1e-15 85.9 42 92.9
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 9.5e-15 82.8 42 90.5
Nitab4.5_0007680g0040 Nicotiana tabacum HOM05D006976 ORTHO05D008761 3.7e-11 70.9 35 91.4
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 9.2e-10 66.2 35 85.7
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 1.7e-08 62.0 32 87.5
BraSC25t45849Z Brassica rapa HOM05D006976 ORTHO05D008761 2.3e-08 61.6 33 87.9
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 9.5e-07 56.2 38 68.4


User provided reference genes

Program Settings