Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0028853g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 1.6e-163 579.3 291 100.0
Nitab4.5_0017516g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 9.2e-159 563.5 291 96.9
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 1.4e-154 549.7 292 94.5
Sopen02g017470 Solanum pennellii HOM05D000141 ORTHO05D004489 1.4e-154 549.7 291 94.5
Solyc02g068340.3 Solanum lycopersicum HOM05D000141 ORTHO05D004489 2.4e-154 548.9 291 94.5
PGSC0003DMG400009428 Solanum tuberosum HOM05D000141 ORTHO05D004489 1.2e-153 546.6 291 94.2
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 2.2e-152 542.3 291 93.1
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 2.4e-135 485.7 291 82.8
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 8.7e-133 477.2 292 79.8
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 4.3e-132 474.9 290 80.0
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 1.6e-131 473.0 291 80.4
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 5.8e-129 464.5 283 79.5
Oeu004295.1 Olea europaea HOM05D000141 ORTHO05D004489 7.6e-129 464.2 291 78.4
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 1.7e-128 463.0 292 80.1
Lsat_1_v5_gn_2_72800 Lactuca sativa HOM05D000141 ORTHO05D004489 1.4e-127 459.9 294 78.6
CSS0021249 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 4.2e-127 458.4 290 77.6
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 7.1e-127 457.6 294 77.2
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 7.1e-127 457.6 294 78.6
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 2.1e-126 456.1 282 80.5
ECA238G3829 Erigeron canadensis HOM05D000141 ORTHO05D004489 3.5e-126 455.3 294 79.3
SGA_v2.0_scaffold45G17090 Striga asiatica HOM05D000141 ORTHO05D004489 4.6e-126 454.9 291 77.3
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 4.6e-126 454.9 294 78.2
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 2.3e-125 452.6 294 77.2
Potri.011G146700 Populus trichocarpa HOM05D000141 ORTHO05D004489 2.5e-124 449.1 284 78.9
Lj4C246T10 Lonicera japonica HOM05D000141 ORTHO05D004489 3.3e-124 448.7 283 78.4
Rhsim10G0188900 Rhododendron simsii HOM05D000141 ORTHO05D004489 3.3e-124 448.7 294 76.9
Potri.001G455300 Populus trichocarpa HOM05D000141 ORTHO05D004489 4.8e-123 444.9 284 78.2
MBI04_g23902_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 8.2e-123 444.1 294 74.8
RcHm_v2.0_Chr2g0096601 Rosa chinensis HOM05D000141 ORTHO05D004489 1.4e-122 443.4 295 76.3
Prupe.7G188900 Prunus persica HOM05D000141 ORTHO05D004489 1.8e-122 443.0 295 75.3
Eucgr.I02176 Eucalyptus grandis HOM05D000141 ORTHO05D004489 2.4e-122 442.6 294 76.9
vmacro20418 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 9.0e-122 440.7 294 74.8
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 1.2e-121 440.3 292 75.7
FAN28G1293 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.2e-121 440.3 295 75.9
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 1.5e-121 439.9 281 77.9
Manes.01G158800 Manihot esculenta HOM05D000141 ORTHO05D004489 2.6e-121 439.1 278 78.8
Haze_03652 Corylus avellana HOM05D000141 ORTHO05D004489 3.4e-121 438.7 295 74.9
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 4.5e-121 438.3 292 75.3
Glyma.11G089400 Glycine max HOM05D000141 ORTHO05D004489 4.5e-121 438.3 295 73.9
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 4.5e-121 438.3 295 73.9
Ca_25026_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 5.8e-121 438.0 291 75.3
FvH4_1g09831 Fragaria vesca HOM05D000141 ORTHO05D004489 7.6e-121 437.6 295 75.3
Nn6g31557 Nelumbo nucifera HOM05D000141 ORTHO05D004489 7.6e-121 437.6 294 73.1
FAN23G0353 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.0e-120 437.2 295 75.3
TWI31G1431 Tripterygium wilfordii HOM05D000141 ORTHO05D004489 1.0e-120 437.2 283 76.7
Atru.chr3.3 Acer truncatum HOM05D000141 ORTHO05D004489 1.7e-120 436.4 284 76.8
Lj2g0025271 Lotus japonicus HOM05D000141 ORTHO05D004489 1.7e-120 436.4 294 74.1
FAN23G1938 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.2e-120 436.0 295 74.9
FAN26G1899 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.2e-120 436.0 295 74.9
Sabra16G0308000 Salix brachista HOM05D000141 ORTHO05D004489 2.2e-120 436.0 284 77.1
FAN19G2837 Fragaria x ananassa HOM05D000141 ORTHO05D004489 3.8e-120 435.3 295 74.9
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 4.9e-120 434.9 295 74.6
MD02G1106300 Malus domestica HOM05D000141 ORTHO05D004489 4.9e-120 434.9 299 74.2
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 1.1e-119 433.7 295 73.6
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 1.4e-119 433.3 295 73.2
MD15G1226100 Malus domestica HOM05D000141 ORTHO05D004489 3.2e-119 432.2 295 74.6
Lalb_Chr16g0391741 Lupinus albus HOM05D000141 ORTHO05D004489 4.2e-119 431.8 296 73.6
VMungo0251G0509 Vigna mungo HOM05D000141 ORTHO05D004489 2.7e-118 429.1 295 73.2
Cpa.g.sc17.14 Carica papaya HOM05D000141 ORTHO05D004489 3.5e-118 428.7 284 75.7
Glyma.09G194900 Glycine max HOM05D000141 ORTHO05D004489 3.5e-118 428.7 295 73.2
ATR0605G264 Amborella trichopoda HOM05D000141 ORTHO05D004489 6.0e-118 427.9 294 72.1
Phvul.003G279200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 6.0e-118 427.9 295 72.9
SGA_v2.0_scaffold229G43289 Striga asiatica HOM05D000141 ORTHO05D004489 6.0e-118 427.9 318 68.6
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 1.8e-117 426.4 284 75.4
Medtr5g025100 Medicago truncatula HOM05D000141 ORTHO05D004489 3.0e-117 425.6 295 73.2
Lalb_Chr09g0324901 Lupinus albus HOM05D000141 ORTHO05D004489 3.9e-117 425.2 296 71.6
CsaV3_3G000070 Cucumis sativus L. HOM05D000141 ORTHO05D004489 6.7e-117 424.5 292 73.6
PGR119G2404 Punica granatum HOM05D000141 ORTHO05D004489 8.7e-117 424.1 286 76.9
Lj4g0000360 Lotus japonicus HOM05D000141 ORTHO05D004489 1.5e-116 423.3 297 71.7
MELO3C013702.2 Cucumis melo HOM05D000141 ORTHO05D004489 1.9e-116 422.9 292 73.6
Duzib147G0825 Durio zibethinus HOM05D000141 ORTHO05D004489 3.3e-116 422.2 296 73.0
Aqoxy6G03061 Aquilegia oxysepala HOM05D000141 ORTHO05D004489 5.7e-116 421.4 267 77.2
AUR62003324 Chenopodium quinoa HOM05D000141 ORTHO05D004489 7.4e-116 421.0 292 73.6
AUR62016257 Chenopodium quinoa HOM05D000141 ORTHO05D004489 1.6e-115 419.9 292 73.6
Glyma.16G111200 Glycine max HOM05D000141 ORTHO05D004489 2.2e-115 419.5 295 71.9
Sc03g0004200 Simmondsia chinensis HOM05D000141 ORTHO05D004489 2.2e-115 419.5 292 74.0
Ah.03g149230 Amaranthus hybridus HOM05D000141 ORTHO05D004489 1.4e-114 416.8 292 73.3
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 3.1e-114 415.6 284 72.2
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 4.1e-114 415.2 284 72.5
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 6.9e-114 414.5 284 72.5
ClCG10G000070 Citrullus lanatus HOM05D000141 ORTHO05D004489 2.9e-112 409.1 283 72.8
EL10Ac6g14723 Beta vulgaris HOM05D000141 ORTHO05D004489 3.8e-112 408.7 292 72.3
Sed0006453 Sechium edule HOM05D000141 ORTHO05D004489 3.8e-112 408.7 284 72.5
Psat2g146880 Pisum sativum HOM05D000141 ORTHO05D004489 1.9e-111 406.4 295 70.5
QL06p053568 Quercus lobata HOM05D000141 ORTHO05D004489 4.2e-111 405.2 247 78.9
CDE11G0155 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 9.4e-111 404.1 294 69.7
MBI01_g31984_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 2.1e-110 402.9 282 71.3
TPR.G33741 Trifolium pratense HOM05D000141 ORTHO05D004489 2.1e-110 402.9 295 69.8
Dinv28284 Davidia involucrata HOM05D000141 ORTHO05D004489 3.6e-110 402.1 294 70.7
PSO170G4746 Papaver somniferum HOM05D000141 ORTHO05D004489 2.3e-109 399.4 294 68.7
Medtr8g072430 Medicago truncatula HOM05D000141 ORTHO05D004489 1.1e-108 397.1 296 68.9
TPR.G14268 Trifolium pratense HOM05D000141 ORTHO05D004489 4.3e-108 395.2 291 67.7
Psat4g106800 Pisum sativum HOM05D000141 ORTHO05D004489 1.1e-106 390.6 296 67.9
Zm00001eb067080 Zea mays HOM05D000141 ORTHO05D004489 3.8e-104 382.1 263 74.1
Thecc.01G000500 Theobroma cacao HOM05D000141 ORTHO05D004489 7.2e-103 377.9 231 77.9
SEGI_37552 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 4.7e-102 375.2 294 65.6
Sp2g30770 Schrenkiella parvula HOM05D000141 ORTHO05D004489 1.8e-101 373.2 288 67.0
Aa31LG1G14480 Aethionema arabicum HOM05D000522 ORTHO05D004489 5.1e-101 371.7 286 67.5
Carub.0008s2860 Capsella rubella HOM05D000141 ORTHO05D004489 5.1e-101 371.7 287 67.6
AL8G45710 Arabidopsis lyrata HOM05D000141 ORTHO05D004489 8.8e-101 370.9 287 67.9
AT5G65930 Arabidopsis thaliana HOM05D000141 ORTHO05D004489 8.8e-101 370.9 287 67.2
COL.COLO4_22572 Corchorus olitorius HOM05D000141 ORTHO05D004489 8.8e-101 370.9 295 68.1
Thhalv10003527m.g Eutrema salsugineum HOM05D000141 ORTHO05D004489 2.0e-100 369.8 288 67.0
arahy.Tifrunner.gnm1.ann1.77JLPP Arachis hypogaea HOM05D000141 ORTHO05D004489 5.7e-100 368.2 296 63.5
arahy.Tifrunner.gnm1.ann1.L4A5BH Arachis hypogaea HOM05D000141 ORTHO05D004489 5.7e-100 368.2 296 63.5
CARHR053030 Cardamine hirsuta HOM05D000141 ORTHO05D004489 7.4e-100 367.9 287 66.9
Sabra11G0131600 Salix brachista HOM05D000141 ORTHO05D004489 8.2e-99 364.4 284 66.9
THA.LOC104824715 Tarenaya hassleriana HOM05D000141 ORTHO05D004489 4.5e-97 358.6 232 76.3
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 6.5e-96 354.8 283 65.7
Ca_22442_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.6e-94 350.1 294 63.6
Ca_22449_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.6e-94 350.1 294 63.6
CANSAT25G2595 Cannabis sativa HOM05D000141 ORTHO05D004489 3.9e-93 345.5 211 79.1
C09p12180 Brassica napus HOM05D000141 ORTHO05D004489 5.2e-93 345.1 291 63.2
BolC9t54106H Brassica oleracea HOM05D000141 ORTHO05D004489 1.1e-92 344.0 291 63.2
BcaC04g23100 Brassica carinata HOM05D000141 ORTHO05D004489 2.0e-92 343.2 291 62.9
BcaB04g20133 Brassica carinata HOM05D000141 ORTHO05D004489 2.6e-92 342.8 293 62.8
A09p10250 Brassica napus HOM05D000141 ORTHO05D004489 3.3e-92 342.4 292 63.4
BraA09t36670Z Brassica rapa HOM05D000141 ORTHO05D004489 3.3e-92 342.4 291 63.2
Os04g0666900 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004489 1.8e-90 336.7 218 76.6
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 1.2e-89 334.0 299 61.5
SMO222G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 7.7e-89 331.3 304 56.9
SMO118G0228 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 2.2e-88 329.7 304 56.6
AagrBONN_evm.TU.Sc2ySwM_228.4247 Anthoceros agrestis HOM05D000141 ORTHO05D004489 3.6e-86 322.4 249 63.5
Rhsim08G0024500 Rhododendron simsii HOM05D000141 ORTHO05D004489 2.6e-84 316.2 232 65.5
Mapoly0012s0174 Marchantia polymorpha HOM05D000141 ORTHO05D004489 2.8e-83 312.8 311 53.1
BraA02t09381Z Brassica rapa HOM05D000141 ORTHO05D004489 1.4e-82 310.5 313 56.2
Pp3c15_3730 Physcomitrium patens HOM05D000141 ORTHO05D004489 3.1e-82 309.3 254 60.6
Pp3c9_4530 Physcomitrium patens HOM05D000141 ORTHO05D004489 5.9e-81 305.1 255 58.4
HPP92_022037 Vanilla planifolia HOM05D000141 ORTHO05D004489 1.3e-75 287.3 279 55.6
HPP92_023789 Vanilla planifolia HOM05D000141 ORTHO05D004489 1.1e-71 274.2 247 54.3
Pp3c11_5890 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.5e-63 247.3 281 48.8
Hund19673 Selenicereus undatus HOM05D000141 ORTHO05D004489 1.9e-63 246.9 199 65.3
CBR_g9092 Chara braunii HOM05D000141 ORTHO05D004489 3.1e-61 239.6 284 47.2
vmacro18483 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 3.1e-61 239.6 175 65.7
Pp3c2_29920 Physcomitrium patens HOM05D000141 ORTHO05D004489 4.0e-61 239.2 236 51.3
CBR_g8104 Chara braunii HOM05D000141 ORTHO05D004489 1.7e-59 233.8 238 50.0
CsaV3_UNG147160 Cucumis sativus L. HOM05D000141 ORTHO05D004489 6.6e-56 221.9 233 52.4
Cre06.g278125 Chlamydomonas reinhardtii HOM05D000141 ORTHO05D004489 9.8e-52 208.0 236 50.0
Psat6g138520 Pisum sativum HOM05D000141 ORTHO05D004489 2.2e-43 180.3 200 53.5
Hma1.2p1_0490F.1_g164200 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 1.6e-38 164.1 180 50.0
CDE02G4290 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 2.4e-37 160.2 146 55.5
CDE02G4588 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 5.8e-36 155.6 152 53.9
Psat2g033360 Pisum sativum HOM05D000141 ORTHO05D004489 2.8e-30 136.7 111 64.9
PRCOL_00006273 Prasinoderma coloniale HOM05D000141 ORTHO05D004489 1.4e-29 134.4 245 35.1
SHI32496 Sapria himalayana HOM05D000141 ORTHO05D004489 4.0e-29 132.9 92 64.1
MCO02G386 Micromonas commoda HOM05D000141 ORTHO05D004489 2.2e-27 127.1 252 31.3
SHI32495 Sapria himalayana HOM05D000141 ORTHO05D004489 1.4e-26 124.4 94 66.0
unitig_748.g7256 Utricularia gibba HOM05D000141 ORTHO05D004489 1.3e-22 111.3 181 40.3
MBI05_g40559_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 2.4e-18 97.1 70 64.3
Nitab4.5_0000973g0040 Nicotiana tabacum HOM05D000141 ORTHO05D004489 4.0e-13 79.7 40 95.0
CBR_g11025 Chara braunii HOM05D000141 ORTHO05D024949 7.6e-12 75.5 238 25.2
SHI32494 Sapria himalayana HOM05D000141 ORTHO05D004489 1.3e-11 74.7 57 61.4
SEGI_08917 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.3e-11 74.7 78 44.9
Mapoly0063s0065 Marchantia polymorpha HOM05D024533 ORTHO05D024949 8.4e-11 72.0 147 32.0
Mapoly0090s0045 Marchantia polymorpha HOM05D000141 ORTHO05D024949 4.2e-10 69.7 224 24.6
SEGI_06404 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 9.3e-10 68.6 66 47.0
CARHR053040 Cardamine hirsuta HOM05D000141 ORTHO05D022222 1.6e-09 67.8 44 72.7
unitig_748.g7255 Utricularia gibba HOM05D000141 ORTHO05D004489 2.7e-09 67.0 62 61.3
SMO143G0011 Selaginella moellendorffii HOM05D024533 ORTHO05D024949 1.3e-08 64.7 103 34.0
Pp3c1_18911 Physcomitrium patens HOM05D024533 ORTHO05D024949 8.7e-08 62.0 106 32.1


User provided reference genes

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