Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0028800g0010 Nicotiana tabacum HOM05D001087 ORTHO05D005406 5.2e-102 374.4 190 100.0
Nitab4.5_0002901g0050 Nicotiana tabacum HOM05D001087 ORTHO05D005406 3.5e-74 282.0 161 91.3
CAN.G473.167 Capsicum annuum HOM05D001087 ORTHO05D005406 3.1e-70 268.9 162 87.7
Solyc02g094610.1 Solanum lycopersicum HOM05D001087 ORTHO05D005406 2.6e-69 265.8 162 85.8
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 2.6e-69 265.8 162 85.8
Peaxi162Scf00420g00945 Petunia axillaris HOM05D001087 ORTHO05D005406 7.6e-69 264.2 162 85.8
Peaxi162Scf00082g00223 Petunia axillaris HOM05D001087 ORTHO05D005406 6.8e-62 241.1 159 81.1
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 1.4e-51 206.8 162 68.5
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 3.2e-51 205.7 163 68.1
Lj7A620G42 Lonicera japonica HOM05D001087 ORTHO05D005406 1.0e-49 200.7 162 67.3
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 2.3e-49 199.5 163 65.6
Haze_14336 Corylus avellana HOM05D001087 ORTHO05D005406 3.0e-49 199.1 183 63.4
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 3.9e-49 198.7 163 67.5
Cpa.g.sc70.26 Carica papaya HOM05D001087 ORTHO05D005406 1.5e-48 196.8 163 67.5
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 1.5e-48 196.8 163 66.3
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 2.5e-48 196.1 162 65.4
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 3.3e-48 195.7 163 65.0
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 5.6e-48 194.9 163 64.4
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 9.6e-48 194.1 162 63.6
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 9.6e-48 194.1 163 65.0
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 1.6e-47 193.4 163 63.8
FAN14G5433 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.6e-47 193.4 163 63.8
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 1.6e-47 193.4 163 63.2
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 1.6e-47 193.4 163 63.2
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 2.1e-47 193.0 165 65.5
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 2.1e-47 193.0 162 64.2
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 2.8e-47 192.6 163 64.4
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 3.6e-47 192.2 162 62.3
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 4.8e-47 191.8 163 63.8
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 8.1e-47 191.0 163 64.4
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 1.1e-46 190.7 163 64.4
ClCG05G012380 Citrullus lanatus HOM05D001087 ORTHO05D005406 1.4e-46 190.3 162 64.8
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 1.4e-46 190.3 162 63.0
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 2.4e-46 189.5 163 63.8
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 2.4e-46 189.5 163 63.8
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 3.1e-46 189.1 163 60.7
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 3.1e-46 189.1 162 63.6
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 6.9e-46 188.0 163 62.6
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 1.5e-45 186.8 165 60.0
Sc16g0004210 Simmondsia chinensis HOM05D001087 ORTHO05D005406 2.0e-45 186.4 163 63.2
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 2.6e-45 186.0 163 62.0
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 2.6e-45 186.0 163 61.3
Peaxi162Scf00281g00313 Petunia axillaris HOM05D001087 ORTHO05D005406 3.4e-45 185.7 116 82.8
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 4.5e-45 185.3 167 65.9
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 5.8e-45 184.9 163 63.8
Eucgr.H05015 Eucalyptus grandis HOM05D001087 ORTHO05D005406 1.3e-44 183.7 163 61.3
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 2.2e-44 183.0 163 61.3
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 4.9e-44 181.8 165 60.0
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 4.9e-44 181.8 163 60.1
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 4.9e-44 181.8 163 60.1
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 6.4e-44 181.4 164 62.2
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 6.4e-44 181.4 163 60.1
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 8.4e-44 181.0 162 61.7
Psat0s4626g0080 Pisum sativum HOM05D001087 ORTHO05D005406 8.4e-44 181.0 163 62.0
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 8.4e-44 181.0 152 64.5
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 1.1e-43 180.6 163 63.2
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 1.4e-43 180.3 165 60.0
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 1.4e-43 180.3 165 60.0
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 1.9e-43 179.9 177 58.8
FAN25G2039 Fragaria x ananassa HOM05D001087 ORTHO05D005406 2.4e-43 179.5 167 60.5
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 3.2e-43 179.1 163 60.1
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 4.2e-43 178.7 162 59.9
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 7.1e-43 177.9 162 58.6
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 7.1e-43 177.9 163 61.3
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 1.6e-42 176.8 165 58.2
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 1.6e-42 176.8 163 59.5
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 3.5e-42 175.6 163 61.3
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 3.5e-42 175.6 162 59.3
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 3.5e-42 175.6 163 60.7
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 6.0e-42 174.9 185 54.6
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 7.9e-42 174.5 163 59.5
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 1.8e-41 173.3 163 58.3
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 3.9e-41 172.2 162 60.5
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 6.7e-41 171.4 163 58.9
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 1.5e-40 170.2 163 59.5
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 5.6e-40 168.3 162 56.8
HPP92_021715 Vanilla planifolia HOM05D001087 ORTHO05D005406 5.6e-40 168.3 162 56.8
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 9.6e-40 167.5 163 62.0
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 4.5e-37 158.7 163 53.4
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 4.5e-37 158.7 163 53.4
CARHR013280 Cardamine hirsuta HOM05D001087 ORTHO05D005406 7.6e-37 157.9 162 54.3
FAN03G2103 Fragaria x ananassa HOM05D001087 ORTHO05D005406 7.6e-37 157.9 117 71.8
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 1.0e-36 157.5 162 54.3
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 1.3e-36 157.1 163 53.4
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 1.3e-36 157.1 163 52.8
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 1.7e-36 156.8 163 53.4
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 2.2e-36 156.4 162 53.1
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 2.2e-36 156.4 163 52.8
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 6.5e-36 154.8 162 54.3
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 1.4e-35 153.7 163 54.0
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 1.9e-35 153.3 162 53.1
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 4.2e-35 152.1 163 52.8
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 1.4e-30 137.1 130 60.0
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 6.9e-30 134.8 164 48.8
DCAR_000957 Daucus carota HOM05D001087 ORTHO05D005406 2.0e-29 133.3 131 57.3
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 2.5e-27 126.3 163 47.2
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 2.5e-27 126.3 163 47.2
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 5.5e-27 125.2 163 47.2
Dinv00562 Davidia involucrata HOM05D001087 ORTHO05D005406 4.6e-26 122.1 155 49.0
SalBow1G1885 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.5e-24 117.1 89 64.0
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 3.7e-23 112.5 114 56.1
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 3.1e-22 109.4 140 45.7
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 1.4e-19 100.5 168 45.8
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 1.1e-16 90.9 154 40.9
MBI14_g42933_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D012772 2.5e-16 89.7 77 62.3
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 1.4e-14 84.0 134 42.5
Peaxi162Scf00281g00315 Petunia axillaris HOM05D001087 ORTHO05D005406 1.7e-12 77.0 44 88.6
CSS0046935 Camellia sinensis var. sinensis HOM05D000812 ORTHO05D000672 2.6e-08 63.2 54 63.0
DCAR_010349 Daucus carota HOM05D001087 ORTHO05D005406 1.4e-06 57.4 44 59.1
FAN04G2467 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.4e-06 57.4 35 80.0
DCAR_029488 Daucus carota HOM05D001087 ORTHO05D005406 1.8e-06 57.0 45 55.6
DCAR_032217 Daucus carota HOM05D001087 ORTHO05D005406 3.1e-06 56.2 78 41.0
DCAR_024188 Daucus carota HOM05D000352 ORTHO05D001293 5.3e-06 55.5 43 58.1


User provided reference genes

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