Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.4e-156 557.0 812 100.0
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 9.5e-129 465.3 813 94.2
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 5.1e-106 389.8 688 95.5
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 6.7e-74 283.1 764 85.6
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 1.2e-70 272.3 793 84.5
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 6.3e-64 250.0 181 72.9
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 5.3e-63 246.9 181 72.4
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 6.5e-45 186.8 793 80.1
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 1.2e-41 176.0 221 50.2
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 9.5e-36 156.4 134 62.7
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 1.2e-33 149.4 167 50.9
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 2.0e-33 148.7 185 48.1
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 3.4e-33 147.9 193 45.1
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 4.4e-33 147.5 173 71.7
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 9.8e-33 146.4 222 42.3
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 1.8e-31 142.1 143 55.9
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 7.0e-31 140.2 170 75.9
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 9.2e-31 139.8 173 71.7
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 6.0e-30 137.1 130 59.2
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 3.0e-29 134.8 161 50.3
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 1.5e-28 132.5 203 41.4
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.2e-27 129.4 179 44.7
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.1e-26 126.3 179 44.1
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 1.4e-26 125.9 176 44.9
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 1.8e-26 125.6 168 70.8
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 3.1e-26 124.8 179 43.6
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.2e-25 122.9 170 44.7
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 2.6e-25 121.7 166 44.6
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.6e-25 121.7 170 42.9
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 4.4e-25 120.9 165 42.4
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 1.3e-24 119.4 160 45.0
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 3.7e-24 117.9 168 44.0
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 6.4e-24 117.1 179 41.9
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 6.4e-24 117.1 182 42.9
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 3.2e-23 114.8 148 43.2
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 4.1e-23 114.4 149 43.6
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 1.2e-22 112.8 163 42.9
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 1.6e-22 112.5 193 65.8
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.7e-22 111.7 170 38.2
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 1.3e-21 109.4 168 69.0
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 1.7e-21 109.0 171 42.1
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 8.6e-21 106.7 179 67.0
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.5e-20 105.9 175 62.9
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 1.5e-20 105.9 194 35.6
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 2.5e-20 105.1 127 47.2
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 2.5e-20 105.1 188 36.2
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 2.5e-20 105.1 188 36.7
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 3.3e-20 104.8 197 37.1
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 4.3e-20 104.4 171 67.8
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 7.3e-20 103.6 166 65.7
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 4.7e-19 100.9 158 42.4
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 1.1e-18 99.8 156 37.2
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.1e-18 99.8 169 63.9
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 1.8e-18 99.0 171 67.3
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 2.3e-18 98.6 190 35.8
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 3.1e-18 98.2 148 42.6
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 5.2e-18 97.4 169 63.3
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 5.2e-18 97.4 169 63.3
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 6.8e-18 97.1 178 62.9
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 1.5e-17 95.9 174 39.7
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 5.8e-17 94.0 204 34.8
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 9.9e-17 93.2 149 41.6
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 2.2e-16 92.0 163 63.8
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 2.9e-16 91.7 102 41.2
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 2.9e-16 91.7 166 63.9
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.9e-16 91.7 165 65.5
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 1.1e-15 89.7 173 33.5
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 1.4e-15 89.4 177 36.7
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 3.2e-15 88.2 168 65.5
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 3.2e-15 88.2 170 62.9
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 5.4e-15 87.4 67 58.2
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 7.1e-15 87.0 166 38.0
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 9.2e-15 86.7 98 40.8
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 1.6e-14 85.9 94 41.5
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 2.7e-14 85.1 180 63.3
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 2.7e-14 85.1 174 35.1
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 6.0e-14 84.0 160 32.5
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 6.0e-14 84.0 164 62.8
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 7.8e-14 83.6 161 64.0
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 7.8e-14 83.6 166 62.0
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 1.7e-13 82.4 175 60.0
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 1.1e-12 79.7 99 48.5
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 9.5e-12 76.6 166 37.3
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 8.1e-11 73.6 160 33.1
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 8.1e-11 73.6 177 31.6
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 8.1e-11 73.6 114 39.5
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 1.4e-10 72.8 118 39.0
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 2.4e-10 72.0 58 56.9
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 3.1e-10 71.6 166 60.8
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.5e-09 69.3 167 34.1
ECA233G1087 Erigeron canadensis HOM05D001398 ORTHO05D001467 2.6e-09 68.6 138 31.2
FAN03G3455 Fragaria x ananassa HOM05D007212 ORTHO05D009094 4.4e-09 67.8 113 31.9
Lj9P304T66 Lonicera japonica HOM05D007410 ORTHO05D009500 4.4e-09 67.8 174 61.5
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 5.8e-09 67.4 159 32.1
PSO135G0775 Papaver somniferum HOM05D025533 ORTHO05D021545 2.2e-08 65.5 76 46.1
arahy.Tifrunner.gnm1.ann1.C93D89 Arachis hypogaea HOM05D007212 ORTHO05D009094 3.8e-08 64.7 159 28.9
PSO384G3142 Papaver somniferum HOM05D025533 ORTHO05D021545 3.8e-08 64.7 76 44.7
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 4.9e-08 64.3 177 59.3
FAN21G0605 Fragaria x ananassa HOM05D007212 ORTHO05D009094 4.9e-08 64.3 92 34.8
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 4.9e-08 64.3 50 56.0
ATR0820G257 Amborella trichopoda HOM05D007410 ORTHO05D009500 6.4e-08 63.9 76 44.7
arahy.Tifrunner.gnm1.ann1.0V2A2H Arachis hypogaea HOM05D007212 ORTHO05D009094 6.4e-08 63.9 159 28.9
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 6.4e-08 63.9 144 56.2
Migut.A01166 Erythranthe guttata HOM05D007410 ORTHO05D030957 8.4e-08 63.5 57 52.6
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 5.4e-07 60.8 159 62.3
HanXRQChr03g0091321 Helianthus annuus HOM05D000162 ORTHO05D000090 5.4e-07 60.8 100 28.0
HanXRQChr03g0090891 Helianthus annuus HOM05D000162 ORTHO05D000090 2.1e-06 58.9 118 28.0
Lalb_Chr01g0001381 Lupinus albus HOM05D007212 ORTHO05D009094 2.1e-06 58.9 159 26.4
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 2.1e-06 58.9 56 58.9
Actinidia11327 Actinidia chinensis HOM05D007410 ORTHO05D019476 3.5e-06 58.2 42 66.7
Potri.001G236800 Populus trichocarpa HOM05D007212 ORTHO05D009094 3.5e-06 58.2 113 29.2
HanXRQChr04g0095081 Helianthus annuus HOM05D000162 ORTHO05D000090 4.6e-06 57.8 108 25.9
HanXRQChr06g0180871 Helianthus annuus HOM05D000162 ORTHO05D000090 7.8e-06 57.0 108 25.0


User provided reference genes

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