Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0026364g0010 Nicotiana tabacum HOM05D011975 ORTHO05D001736 3.9e-191 671.8 360 100.0
Nitab4.5_0003583g0020 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.1e-164 583.9 360 90.0
Peaxi162Scf00667g00065 Petunia axillaris HOM05D011975 ORTHO05D001736 9.1e-108 394.8 304 75.0
PGSC0003DMG400017799 Solanum tuberosum HOM05D011975 ORTHO05D001736 9.8e-86 321.6 297 66.0
Solyc04g005410.3 Solanum lycopersicum HOM05D001391 ORTHO05D002605 3.6e-80 303.1 316 61.1
Sopen04g001390 Solanum pennellii HOM05D011975 ORTHO05D001736 2.3e-74 283.9 297 61.6
Nitab4.5_0007460g0020 Nicotiana tabacum HOM05D011975 ORTHO05D001736 3.8e-61 240.0 319 49.8
Peaxi162Scf00026g00163 Petunia axillaris HOM05D011975 ORTHO05D001736 3.5e-51 206.8 314 47.1
CAN.G1377.3 Capsicum annuum HOM05D011975 ORTHO05D001736 1.4e-47 194.9 314 47.5
Nitab4.5_0001118g0030 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.2e-46 191.8 316 44.9
Solyc01g010280.3 Solanum lycopersicum HOM05D011975 ORTHO05D001736 9.3e-44 182.2 351 40.5
Sopen01g005900 Solanum pennellii HOM05D011975 ORTHO05D001736 9.3e-44 182.2 351 40.2
PGSC0003DMG400021892 Solanum tuberosum HOM05D011975 ORTHO05D001736 1.3e-29 135.2 317 35.6
Dinv34065 Davidia involucrata HOM05D003787 ORTHO05D001736 1.2e-22 112.1 363 33.6
PGR119G1736 Punica granatum HOM05D003787 ORTHO05D001736 1.7e-21 108.2 328 35.1
Rhsim09G0127000 Rhododendron simsii HOM05D003787 ORTHO05D001736 2.2e-21 107.8 151 50.3
Hma1.2p1_0566F.1_g179820 Hydrangea macrophylla HOM05D003787 ORTHO05D001736 6.5e-21 106.3 283 38.2
Oeu004587.1 Olea europaea HOM05D011975 ORTHO05D001736 3.6e-19 100.5 194 40.7
Migut.L01187 Erythranthe guttata HOM05D003787 ORTHO05D001736 8.8e-18 95.9 134 50.7
MSTRG.755 Avicennia marina HOM05D011975 ORTHO05D001736 3.3e-17 94.0 175 44.0
DCAR_024124 Daucus carota HOM05D003787 ORTHO05D001736 1.3e-16 92.0 224 38.4
Dinv16736 Davidia involucrata HOM05D003787 ORTHO05D001736 1.3e-16 92.0 172 41.3
QL03p074082 Quercus lobata HOM05D003787 ORTHO05D001736 1.7e-16 91.7 200 39.0
Actinidia13966 Actinidia chinensis HOM05D003787 ORTHO05D001736 4.8e-16 90.1 332 31.9
MD16G1060800 Malus domestica HOM05D003787 ORTHO05D001736 1.3e-13 82.0 137 45.3
Cpa.g.sc1.128 Carica papaya HOM05D003787 ORTHO05D001736 1.7e-13 81.6 210 38.1
CiPaw.05G124800 Carya illinoinensis HOM05D003787 ORTHO05D001736 1.7e-13 81.6 312 33.7
GSVIVG01012223001 Vitis vinifera HOM05D003787 ORTHO05D001736 3.8e-13 80.5 151 43.7
MD13G1062500 Malus domestica HOM05D003787 ORTHO05D001736 5.0e-13 80.1 201 39.8
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 6.5e-13 79.7 152 42.8
Haze_11903 Corylus avellana HOM05D003787 ORTHO05D001736 1.9e-12 78.2 140 43.6
vmacro10428 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 5.5e-12 76.6 251 32.7
Cfa007670 Carpinus fangiana HOM05D003787 ORTHO05D001736 9.4e-12 75.9 87 52.9
Potri.010G158000 Populus trichocarpa HOM05D003787 ORTHO05D001736 9.4e-12 75.9 280 33.9
Sabra08G0072600 Salix brachista HOM05D003787 ORTHO05D001736 2.1e-11 74.7 150 42.7
SHI15724 Sapria himalayana HOM05D003787 ORTHO05D001736 2.7e-11 74.3 240 32.9
Duzib268G1106 Durio zibethinus HOM05D003787 ORTHO05D001736 8.0e-11 72.8 260 34.6
MELO3C012154.2 Cucumis melo HOM05D003787 ORTHO05D001736 2.3e-10 71.2 168 37.5
Prupe.1G287500 Prunus persica HOM05D003787 ORTHO05D001736 4.0e-10 70.5 345 30.7
Ciclev10033684m.g Citrus clementina HOM05D003787 ORTHO05D001736 6.7e-10 69.7 146 42.5
Duzib251G0768 Durio zibethinus HOM05D003787 ORTHO05D001736 1.1e-09 68.9 329 35.3
Lju41C3T13 Lonicera japonica HOM05D003787 ORTHO05D001736 2.0e-09 68.2 77 45.5
Lalb_Chr04g0255641 Lupinus albus HOM05D014318 ORTHO05D001736 2.0e-09 68.2 188 35.6
Lalb_Chr17g0341211 Lupinus albus HOM05D014318 ORTHO05D001736 2.0e-09 68.2 318 30.5
TWI79G0236 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 2.0e-09 68.2 347 29.1
ClCG05G023700 Citrullus lanatus HOM05D003787 ORTHO05D001736 4.4e-09 67.0 121 44.6
CsaV3_5G033340 Cucumis sativus L. HOM05D003787 ORTHO05D001736 4.4e-09 67.0 154 39.0
SGA_v2.0_scaffold36G14463 Striga asiatica HOM05D003787 ORTHO05D001736 4.4e-09 67.0 154 41.6
Lj2g0027532 Lotus japonicus HOM05D014318 ORTHO05D001736 5.7e-09 66.6 350 29.4
MD17G1059900 Malus domestica HOM05D003787 ORTHO05D001736 5.7e-09 66.6 120 41.7
TWI31G1463 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 5.7e-09 66.6 143 40.6
Sabra10G0120000 Salix brachista HOM05D003787 ORTHO05D001736 9.7e-09 65.9 176 38.1
Atru.chr11.1622 Acer truncatum HOM05D003787 ORTHO05D001736 1.3e-08 65.5 208 35.1
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 1.3e-08 65.5 182 38.5
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 1.7e-08 65.1 260 31.9
TWI75G0087 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 1.7e-08 65.1 326 29.4
TAR374G1256 Trochodendron aralioides HOM05D003787 ORTHO05D001736 1.7e-08 65.1 293 30.7
Nn3g17457 Nelumbo nucifera HOM05D003787 ORTHO05D001736 2.8e-08 64.3 146 39.7
Carub.0003s0124 Capsella rubella HOM05D012214 ORTHO05D001736 3.7e-08 63.9 137 38.7
SalBow1G3309 Salvia bowleyana HOM05D003787 ORTHO05D001736 3.7e-08 63.9 177 31.1
SalBow1G5677 Salvia bowleyana HOM05D003787 ORTHO05D001736 3.7e-08 63.9 177 31.1
Lsat_1_v5_gn_2_90140 Lactuca sativa HOM05D003787 ORTHO05D001736 6.3e-08 63.2 95 47.4
THA.LOC104805198 Tarenaya hassleriana HOM05D003787 ORTHO05D001736 6.3e-08 63.2 68 52.9
FvH4_4g29990 Fragaria vesca HOM05D003787 ORTHO05D001736 8.2e-08 62.8 125 39.2
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 8.2e-08 62.8 125 39.2
Sc11g0002500 Simmondsia chinensis HOM05D003787 ORTHO05D001736 8.2e-08 62.8 353 29.2
Ca_04304_v3 Cicer arietinum L. HOM05D003787 ORTHO05D001736 1.1e-07 62.4 125 32.8
Migut.H00622 Erythranthe guttata HOM05D003787 ORTHO05D001736 1.4e-07 62.0 65 53.8
RcHm_v2.0_Chr4g0438271 Rosa chinensis HOM05D003787 ORTHO05D001736 1.4e-07 62.0 143 39.9
Lalb_Chr10g0098891 Lupinus albus HOM05D014318 ORTHO05D001736 1.8e-07 61.6 184 35.9
Peaxi162Scf00166g00047 Petunia axillaris HOM05D003787 ORTHO05D001736 1.8e-07 61.6 216 34.3
Phvul.004G037400 Phaseolus vulgaris HOM05D003787 ORTHO05D001736 1.8e-07 61.6 137 38.0
TAR622G0628 Trochodendron aralioides HOM05D003787 ORTHO05D001736 2.4e-07 61.2 266 30.5
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 3.1e-07 60.8 209 30.6
Nitab4.5_0003841g0060 Nicotiana tabacum HOM05D003787 ORTHO05D001736 3.1e-07 60.8 191 34.0
Prupe.3G254700 Prunus persica HOM05D003787 ORTHO05D001736 3.1e-07 60.8 63 52.4
Atru.chr9.567 Acer truncatum HOM05D006637 ORTHO05D001736 4.1e-07 60.5 157 35.7
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 4.1e-07 60.5 114 44.7
PGSC0003DMG400001359 Solanum tuberosum HOM05D003787 ORTHO05D001736 4.1e-07 60.5 114 37.7
THA.LOC104800368 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 4.1e-07 60.5 128 40.6
Sabra17G0083100 Salix brachista HOM05D003787 ORTHO05D001736 5.3e-07 60.1 136 36.8
SalBow2G2473 Salvia bowleyana HOM05D011975 ORTHO05D001736 5.3e-07 60.1 293 29.4
VMungo0464G0106 Vigna mungo HOM05D003787 ORTHO05D001736 5.3e-07 60.1 134 38.8
Actinidia17586 Actinidia chinensis HOM05D003787 ORTHO05D001736 7.0e-07 59.7 289 31.8
TWI60G0888 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 7.0e-07 59.7 165 32.1
Nitab4.5_0007320g0010 Nicotiana tabacum HOM05D003787 ORTHO05D001736 9.1e-07 59.3 203 34.0
Rhsim10G0049700 Rhododendron simsii HOM05D003787 ORTHO05D001736 9.1e-07 59.3 204 30.9
Medtr5g045480 Medicago truncatula HOM05D003787 ORTHO05D001736 1.2e-06 58.9 79 46.8
Oeu007068.1 Olea europaea HOM05D003787 ORTHO05D001736 1.2e-06 58.9 301 26.9
Potri.017G094300 Populus trichocarpa HOM05D003787 ORTHO05D001736 1.2e-06 58.9 91 41.8
Haze_14428 Corylus avellana HOM05D003787 ORTHO05D001736 1.6e-06 58.5 192 36.5
Psat2g130920 Pisum sativum HOM05D014318 ORTHO05D001736 1.6e-06 58.5 88 50.0
Oeu044877.1 Olea europaea HOM05D006637 ORTHO05D001736 2.0e-06 58.2 155 35.5
Phvul.003G042100 Phaseolus vulgaris HOM05D014318 ORTHO05D001736 2.0e-06 58.2 201 34.8
Aqoxy3G00509 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 2.7e-06 57.8 117 39.3
FAN17G0759 Fragaria x ananassa HOM05D003787 ORTHO05D001736 2.7e-06 57.8 128 36.7
Glyma.19G030300 Glycine max HOM05D003787 ORTHO05D001736 2.7e-06 57.8 95 45.3
Gorai.008G176900 Gossypium raimondii HOM05D039012 ORTHO05D001736 2.7e-06 57.8 179 40.2
Sp2g14470 Schrenkiella parvula HOM05D003787 ORTHO05D001736 2.7e-06 57.8 75 49.3
FAN22G0001 Fragaria x ananassa HOM05D003787 ORTHO05D001736 3.5e-06 57.4 128 39.1
Glyma.01G060001 Glycine max HOM05D014318 ORTHO05D001736 4.5e-06 57.0 119 37.0
Medtr6g015240 Medicago truncatula HOM05D003787 ORTHO05D001736 4.5e-06 57.0 144 35.4
Sed0025283 Sechium edule HOM05D003787 ORTHO05D001736 4.5e-06 57.0 139 38.8
Solyc02g088840.3 Solanum lycopersicum HOM05D003787 ORTHO05D001736 4.5e-06 57.0 64 54.7
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 4.5e-06 57.0 180 36.7
COL.COLO4_27878 Corchorus olitorius HOM05D003787 ORTHO05D001736 5.9e-06 56.6 139 36.7
Sopen02g033550 Solanum pennellii HOM05D003787 ORTHO05D001736 5.9e-06 56.6 83 48.2
vmacro18147 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 5.9e-06 56.6 143 39.9
HPP92_011441 Vanilla planifolia HOM05D003787 ORTHO05D001736 5.9e-06 56.6 61 55.7
CANSAT64G1049 Cannabis sativa HOM05D003787 ORTHO05D001736 7.7e-06 56.2 47 57.4


User provided reference genes

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