Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 1.1e-104 383.3 193 100.0
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 1.4e-94 349.7 233 80.7
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 9.0e-94 347.1 209 87.6
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 2.0e-93 345.9 209 87.1
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 2.0e-93 345.9 209 87.1
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 1.4e-91 339.7 209 85.2
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 3.8e-84 315.1 202 82.7
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 1.6e-82 309.7 209 76.6
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 1.3e-81 306.6 209 76.6
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 3.9e-81 305.1 209 76.6
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 1.1e-80 303.5 209 75.6
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 2.2e-79 299.3 210 76.2
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 7.7e-77 290.8 210 74.3
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 1.7e-76 289.7 202 76.2
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 7.2e-75 284.3 210 73.3
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 3.6e-74 282.0 210 72.4
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 1.7e-71 273.1 209 69.9
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 8.2e-71 270.8 206 70.9
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 1.2e-69 266.9 206 69.4
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 1.7e-68 263.1 203 67.0
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 2.2e-68 262.7 203 66.5
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 6.5e-68 261.2 207 67.6
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 2.5e-67 259.2 189 70.9
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 4.2e-67 258.5 210 63.8
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 9.4e-67 257.3 210 64.8
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 1.6e-66 256.5 210 65.2
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 2.7e-66 255.8 207 65.7
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 3.0e-65 252.3 210 63.8
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 3.0e-65 252.3 210 61.9
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 3.3e-64 248.8 202 63.9
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 4.4e-64 248.4 210 62.9
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 5.7e-64 248.1 210 61.9
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 5.7e-64 248.1 160 79.4
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 2.2e-63 246.1 210 61.4
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 1.8e-62 243.0 210 61.4
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 5.3e-62 241.5 210 61.4
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 5.3e-62 241.5 212 62.3
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 7.0e-62 241.1 230 58.3
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 7.0e-62 241.1 210 60.0
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 9.1e-62 240.7 194 66.0
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.2e-61 240.4 210 61.0
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.2e-61 240.4 210 61.0
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 1.2e-61 240.4 210 61.0
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 2.0e-61 239.6 198 61.6
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 2.0e-61 239.6 207 59.9
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 3.5e-61 238.8 210 60.0
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 3.5e-61 238.8 210 59.5
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 3.5e-61 238.8 210 59.5
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 3.5e-61 238.8 210 59.5
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 3.5e-61 238.8 210 58.6
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.5e-61 238.4 210 59.5
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 4.5e-61 238.4 210 59.5
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 7.7e-61 237.7 210 59.5
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.7e-61 237.7 202 61.4
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 1.0e-60 237.3 210 59.0
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 1.0e-60 237.3 196 61.7
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 1.0e-60 237.3 210 60.5
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 2.2e-60 236.1 201 61.7
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.2e-60 236.1 202 60.9
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 2.2e-60 236.1 197 62.9
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 3.8e-60 235.3 210 58.6
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 3.8e-60 235.3 210 59.0
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 5.0e-60 235.0 202 60.9
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 5.0e-60 235.0 202 60.9
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 6.5e-60 234.6 210 58.6
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 6.5e-60 234.6 210 58.6
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 8.5e-60 234.2 201 61.2
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 8.5e-60 234.2 209 60.3
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 1.1e-59 233.8 210 58.1
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 1.5e-59 233.4 210 58.1
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 1.9e-59 233.0 210 58.1
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 3.2e-59 232.3 201 60.7
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 9.4e-59 230.7 210 58.1
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 1.2e-58 230.3 206 58.7
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 2.1e-58 229.6 208 57.7
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 4.7e-58 228.4 210 56.2
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 1.4e-57 226.9 200 58.0
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.4e-57 226.9 199 59.8
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 2.3e-57 226.1 209 57.4
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 3.0e-57 225.7 199 59.3
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 3.0e-57 225.7 210 55.7
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 1.1e-56 223.8 210 54.8
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 1.1e-56 223.8 216 54.6
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 1.1e-56 223.8 210 55.2
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 2.0e-56 223.0 197 59.4
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 2.0e-56 223.0 209 56.5
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 3.3e-56 222.2 209 56.0
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 1.3e-55 220.3 210 55.2
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 1.7e-55 219.9 156 74.4
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 1.7e-55 219.9 210 55.2
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 1.7e-55 219.9 210 54.8
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 2.2e-55 219.5 169 65.7
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 8.2e-55 217.6 210 54.3
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 1.4e-54 216.9 210 53.8
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 1.8e-54 216.5 210 54.3
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 2.4e-54 216.1 210 54.3
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 4.1e-54 215.3 210 53.8
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 5.3e-54 214.9 214 55.6
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 9.1e-54 214.2 210 53.8
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 1.2e-53 213.8 210 57.1
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 3.5e-53 212.2 208 52.9
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 2.2e-52 209.5 206 53.4
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 2.2e-52 209.5 206 52.9
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 1.1e-51 207.2 169 61.5
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 1.5e-51 206.8 179 59.2
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 3.2e-51 205.7 212 55.2
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 7.2e-51 204.5 169 62.1
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 1.0e-49 200.7 132 79.5
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 1.7e-44 183.3 145 62.8
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 6.5e-44 181.4 190 50.0
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 4.7e-42 175.3 172 54.1
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 4.5e-37 158.7 193 48.2
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.3e-31 140.6 171 45.6
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 3.2e-30 136.0 182 39.0
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 5.4e-30 135.2 113 62.8
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 9.2e-30 134.4 181 37.6
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.1e-22 110.9 106 50.0
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 1.9e-22 110.2 177 37.9
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 2.8e-18 96.3 79 60.8
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 3.7e-15 85.9 63 65.1
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 4.1e-14 82.4 45 80.0
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 3.5e-13 79.3 38 92.1
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 6.0e-13 78.6 81 53.1
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 3.6e-10 69.3 34 88.2
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 1.4e-09 67.4 107 40.2
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 4.9e-07 58.9 49 59.2
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 3.2e-06 56.2 79 40.5
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 4.1e-06 55.8 82 41.5
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 7.1e-06 55.1 84 39.3


User provided reference genes

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