Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0025250g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000980 1.5e-62 242.7 122 100.0
Nitab4.5_0002266g0060 Nicotiana tabacum HOM05D000042 ORTHO05D000980 1.3e-53 213.0 122 88.5
Nitab4.5_0004086g0040 Nicotiana tabacum HOM05D000042 ORTHO05D000980 3.5e-51 204.9 122 86.1
Peaxi162Scf00083g01812 Petunia axillaris HOM05D000042 ORTHO05D000980 1.2e-46 189.9 122 79.5
PGSC0003DMG400003541 Solanum tuberosum HOM05D000042 ORTHO05D000980 5.8e-46 187.6 122 78.7
Sopen02g029300 Solanum pennellii HOM05D000042 ORTHO05D000980 7.5e-46 187.2 122 77.9
Solyc02g084630.3 Solanum lycopersicum HOM05D000042 ORTHO05D000980 1.1e-44 183.3 122 76.2
GSVIVG01018839001 Vitis vinifera HOM05D000042 ORTHO05D000980 3.1e-31 138.7 122 56.6
Actinidia21483 Actinidia chinensis HOM05D000042 ORTHO05D000980 1.9e-28 129.4 124 57.3
Hma1.2p1_0266F.1_g106980 Hydrangea macrophylla HOM05D000042 ORTHO05D000980 3.2e-28 128.6 123 56.1
QL06p034517 Quercus lobata HOM05D000042 ORTHO05D000980 3.2e-28 128.6 121 53.7
Manes.02G100400 Manihot esculenta HOM05D000042 ORTHO05D000980 6.0e-27 124.4 124 53.2
Manes.01G141900 Manihot esculenta HOM05D000042 ORTHO05D000980 8.7e-26 120.6 122 52.5
Cc07_g10310 Coffea canephora HOM05D000042 ORTHO05D000980 9.6e-25 117.1 112 57.1
Ciclev10026433m.g Citrus clementina HOM05D000042 ORTHO05D000980 1.6e-24 116.3 123 52.8
Potri.005G118000 Populus trichocarpa HOM05D000042 ORTHO05D000980 2.1e-24 115.9 124 49.2
Nn5g29187 Nelumbo nucifera HOM05D000042 ORTHO05D000980 1.8e-23 112.8 122 44.3
Thecc.01G024600 Theobroma cacao HOM05D000042 ORTHO05D000980 9.0e-23 110.5 124 50.0
Lj4A213T41 Lonicera japonica HOM05D000042 ORTHO05D000980 1.5e-22 109.8 111 52.3
Gohir.A12G061800 Gossypium hirsutum HOM05D000042 ORTHO05D000980 2.0e-22 109.4 125 52.8
MD02G1136500 Malus domestica HOM05D000042 ORTHO05D000980 4.4e-22 108.2 124 47.6
MD15G1250200 Malus domestica HOM05D000042 ORTHO05D000980 5.8e-22 107.8 127 48.0
Sabra05G0097000 Salix brachista HOM05D002790 ORTHO05D003033 7.6e-22 107.5 116 50.0
TWI73G0866 Tripterygium wilfordii HOM05D000042 ORTHO05D000980 1.7e-21 106.3 95 56.8
Gohir.D12G061700 Gossypium hirsutum HOM05D000042 ORTHO05D000980 2.9e-21 105.5 125 52.0
Duzib264G0358 Durio zibethinus HOM05D000042 ORTHO05D000980 4.9e-21 104.8 125 50.4
Haze_03819 Corylus avellana HOM05D000042 ORTHO05D000980 1.9e-20 102.8 124 49.2
Nn6g32205 Nelumbo nucifera HOM05D000042 ORTHO05D000980 1.9e-20 102.8 122 44.3
Potri.007G017000 Populus trichocarpa HOM05D000042 ORTHO05D000980 3.2e-20 102.1 126 46.0
Atru.chr3.754 Acer truncatum HOM05D000042 ORTHO05D000980 4.2e-20 101.7 120 45.8
Prupe.7G164100 Prunus persica HOM05D000042 ORTHO05D000980 7.1e-20 100.9 125 44.8
HPP92_025424 Vanilla planifolia HOM05D000042 ORTHO05D000980 2.7e-19 99.0 123 43.1
COL.COLO4_21979 Corchorus olitorius HOM05D000042 ORTHO05D000980 6.0e-19 97.8 126 50.0
vmacro22102 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 6.0e-19 97.8 127 43.3
FAN19G0493 Fragaria x ananassa HOM05D000042 ORTHO05D000980 1.3e-18 96.7 115 47.8
Nn1g00156 Nelumbo nucifera HOM05D000042 ORTHO05D000980 1.7e-18 96.3 122 41.8
FAN23G0933 Fragaria x ananassa HOM05D000042 ORTHO05D000980 3.0e-18 95.5 115 47.8
FvH4_1g12260 Fragaria vesca HOM05D000042 ORTHO05D000980 3.9e-18 95.1 115 47.8
Peaxi162Scf01084g00119 Petunia axillaris HOM05D000042 ORTHO05D000980 6.6e-18 94.4 104 49.0
Cpa.g.sc6.202 Carica papaya HOM05D000042 ORTHO05D000980 1.9e-17 92.8 121 45.5
Gorai.008G064900 Gossypium raimondii HOM05D000042 ORTHO05D000980 1.9e-17 92.8 154 42.9
RcHm_v2.0_Chr2g0100071 Rosa chinensis HOM05D000042 ORTHO05D000980 1.9e-17 92.8 116 45.7
CiPaw.08G136100 Carya illinoinensis HOM05D000042 ORTHO05D000980 2.5e-17 92.4 125 44.8
Duzib147G1428 Durio zibethinus HOM05D000042 ORTHO05D000980 4.3e-17 91.7 126 46.0
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 4.3e-17 91.7 102 48.0
CSS0036789 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000980 1.3e-16 90.1 123 40.7
Lalb_Chr05g0212521 Lupinus albus HOM05D000042 ORTHO05D000980 2.8e-16 89.0 109 45.9
PGSC0003DMG400003709 Solanum tuberosum HOM05D000042 ORTHO05D000980 3.6e-16 88.6 101 46.5
Gorai.003G011500 Gossypium raimondii HOM05D000042 ORTHO05D000980 4.8e-16 88.2 109 49.5
CSS0025728 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000980 1.4e-15 86.7 110 39.1
Gohir.A02G168900 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.4e-15 86.7 109 49.5
Gohir.D03G011100 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.4e-15 86.7 109 49.5
Gohir.A05G257900 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.8e-15 86.3 111 40.5
Gohir.D05G259300 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.8e-15 86.3 111 40.5
Gorai.009G271100 Gossypium raimondii HOM05D000042 ORTHO05D000980 1.8e-15 86.3 111 40.5
FAN28G2682 Fragaria x ananassa HOM05D000042 ORTHO05D000980 3.1e-15 85.5 115 46.1
MSTRG.1230 Avicennia marina HOM05D000042 ORTHO05D000980 4.0e-15 85.1 110 41.8
Lj2g0008119 Lotus japonicus HOM05D000042 ORTHO05D000980 4.0e-15 85.1 107 45.8
Medtr5g021270 Medicago truncatula HOM05D000042 ORTHO05D000980 4.0e-15 85.1 118 43.2
Sc03g0003370 Simmondsia chinensis HOM05D000042 ORTHO05D000980 4.0e-15 85.1 118 45.8
HPP92_012975 Vanilla planifolia HOM05D000042 ORTHO05D000980 6.9e-15 84.3 123 41.5
PSO541G4942 Papaver somniferum HOM05D000042 ORTHO05D000980 9.0e-15 84.0 108 42.6
Lalb_Chr09g0322021 Lupinus albus HOM05D000042 ORTHO05D000980 1.2e-14 83.6 106 44.3
Hund14022 Selenicereus undatus HOM05D000042 ORTHO05D000980 1.2e-14 83.6 114 41.2
Nitab4.5_0014584g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000980 2.0e-14 82.8 114 44.7
SGA_v2.0_scaffold11G05863 Striga asiatica HOM05D000042 ORTHO05D000980 2.0e-14 82.8 123 38.2
TWI09G0070 Tripterygium wilfordii HOM05D000042 ORTHO05D000980 2.0e-14 82.8 122 40.2
Aqoxy6G02422 Aquilegia oxysepala HOM05D000042 ORTHO05D000980 2.6e-14 82.4 120 39.2
Migut.N03130 Erythranthe guttata HOM05D000042 ORTHO05D000980 2.6e-14 82.4 104 42.3
Solyc04g081000.3 Solanum lycopersicum HOM05D000042 ORTHO05D000980 2.6e-14 82.4 114 41.2
Sopen04g034610 Solanum pennellii HOM05D000042 ORTHO05D000980 2.6e-14 82.4 114 41.2
Thecc.08G036900 Theobroma cacao HOM05D000042 ORTHO05D000980 2.6e-14 82.4 111 40.5
arahy.Tifrunner.gnm1.ann1.QB26WD Arachis hypogaea HOM05D000042 ORTHO05D000980 5.8e-14 81.3 106 42.5
Medtr3g113030 Medicago truncatula HOM05D000042 ORTHO05D000980 5.8e-14 81.3 118 35.6
Phvul.002G112200 Phaseolus vulgaris HOM05D000042 ORTHO05D000980 5.8e-14 81.3 104 46.2
Psat2g156520 Pisum sativum HOM05D000042 ORTHO05D000980 5.8e-14 81.3 116 42.2
Rhsim06G0027000 Rhododendron simsii HOM05D000042 ORTHO05D000980 7.6e-14 80.9 111 40.5
HPP92_014459 Vanilla planifolia HOM05D000042 ORTHO05D000980 9.9e-14 80.5 114 39.5
VMungo1215G1814 Vigna mungo HOM05D000042 ORTHO05D000980 1.3e-13 80.1 104 45.2
Lsat_1_v5_gn_3_75340 Lactuca sativa HOM05D000042 ORTHO05D000980 1.7e-13 79.7 106 44.3
arahy.Tifrunner.gnm1.ann1.MX0VEQ Arachis hypogaea HOM05D000042 ORTHO05D000980 2.2e-13 79.3 115 37.4
FAN26G0417 Fragaria x ananassa HOM05D000042 ORTHO05D000980 2.2e-13 79.3 156 35.3
Glyma.04G027200 Glycine max HOM05D000042 ORTHO05D000980 2.2e-13 79.3 111 36.0
Glyma.06G027200 Glycine max HOM05D000042 ORTHO05D000980 2.2e-13 79.3 110 36.4
Lalb_Chr23g0266321 Lupinus albus HOM05D000042 ORTHO05D000980 2.2e-13 79.3 110 37.3
TPR.G31198 Trifolium pratense HOM05D000042 ORTHO05D000980 2.2e-13 79.3 107 39.3
GSVIVG01009815001 Vitis vinifera HOM05D000042 ORTHO05D000980 2.2e-13 79.3 115 36.5
HanXRQChr16g0530971 Helianthus annuus HOM05D000042 ORTHO05D000980 3.8e-13 78.6 99 45.5
Cc10_g02160 Coffea canephora HOM05D000042 ORTHO05D000980 4.9e-13 78.2 119 41.2
Hma1.2p1_0773F.1_g216110 Hydrangea macrophylla HOM05D000042 ORTHO05D000980 4.9e-13 78.2 112 40.2
Ca_02063_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000980 6.4e-13 77.8 111 36.0
Phvul.009G013900 Phaseolus vulgaris HOM05D000042 ORTHO05D000980 6.4e-13 77.8 107 37.4
VMungo1309G1352 Vigna mungo HOM05D000042 ORTHO05D000980 8.4e-13 77.4 108 38.9
Cpa.g.sc6.199 Carica papaya HOM05D000042 ORTHO05D000980 1.4e-12 76.6 119 41.2
Duzib093G1295 Durio zibethinus HOM05D000042 ORTHO05D000980 1.4e-12 76.6 111 36.0
SalBow8G2274 Salvia bowleyana HOM05D000042 ORTHO05D000980 1.4e-12 76.6 104 40.4
Aqoxy6G02416 Aquilegia oxysepala HOM05D000042 ORTHO05D000980 1.9e-12 76.3 122 36.9
SGA_v2.0_scaffold162G37923 Striga asiatica HOM05D000042 ORTHO05D000980 1.9e-12 76.3 112 41.1
Lj1g0020637 Lotus japonicus HOM05D000042 ORTHO05D000980 2.4e-12 75.9 116 36.2
Duzib041G0590 Durio zibethinus HOM05D000042 ORTHO05D000980 7.1e-12 74.3 111 36.9
Manes.05G153000 Manihot esculenta HOM05D000042 ORTHO05D000980 9.3e-12 73.9 115 37.4
Glyma.11G073700 Glycine max HOM05D000042 ORTHO05D000980 1.6e-11 73.2 98 41.8
SGA_v2.0_scaffold201G41318 Striga asiatica HOM05D000042 ORTHO05D000980 1.6e-11 73.2 100 39.0
CSS0028833 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000980 2.1e-11 72.8 64 57.8
Lalb_Chr11g0062091 Lupinus albus HOM05D000042 ORTHO05D000980 2.1e-11 72.8 106 36.8
AUR62007658 Chenopodium quinoa HOM05D000042 ORTHO05D000980 1.3e-10 70.1 108 39.8
TPR.G2385 Trifolium pratense HOM05D000042 ORTHO05D000980 1.3e-10 70.1 131 37.4
Glyma.01G169600 Glycine max HOM05D000042 ORTHO05D000980 1.8e-10 69.7 105 41.0
AUR62007643 Chenopodium quinoa HOM05D000042 ORTHO05D000980 2.3e-10 69.3 108 39.8
DCAR_017330 Daucus carota HOM05D000042 ORTHO05D000980 3.0e-10 68.9 120 35.8
Os06g0712700 Oryza sativa ssp. japonica HOM05D000042 ORTHO05D000980 5.1e-10 68.2 122 34.4
Ca_24890_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000980 1.9e-09 66.2 98 40.8
Eucgr.I02376 Eucalyptus grandis HOM05D000042 ORTHO05D000980 1.9e-09 66.2 115 37.4
Sed0007855 Sechium edule HOM05D000042 ORTHO05D000980 1.9e-09 66.2 108 37.0
EL10Ac1g00563 Beta vulgaris HOM05D000042 ORTHO05D000980 7.4e-09 64.3 115 33.0
Psat5g013960 Pisum sativum HOM05D000042 ORTHO05D000980 7.4e-09 64.3 115 34.8
Gorai.009G408900 Gossypium raimondii HOM05D021096 ORTHO05D020782 9.6e-09 63.9 69 49.3
Sed0023354 Sechium edule HOM05D000042 ORTHO05D000980 2.1e-08 62.8 111 36.0
DCAR_009949 Daucus carota HOM05D000042 ORTHO05D000980 1.4e-07 60.1 111 33.3
Aqoxy1G03883 Aquilegia oxysepala HOM05D000042 ORTHO05D000980 2.4e-07 59.3 100 35.0
Sp5g08060 Schrenkiella parvula HOM05D000042 ORTHO05D000980 2.4e-07 59.3 101 32.7
TWI56G0651 Tripterygium wilfordii HOM05D000042 ORTHO05D000980 2.4e-07 59.3 110 32.7
QL09p025203 Quercus lobata HOM05D000042 ORTHO05D000980 3.1e-07 58.9 83 34.9
Aa31sc915G10 Aethionema arabicum HOM05D000042 ORTHO05D000980 4.0e-07 58.5 103 32.0
Lsat_1_v5_gn_5_25820 Lactuca sativa HOM05D000042 ORTHO05D000980 6.9e-07 57.8 107 29.9
BcaB01g00201 Brassica carinata HOM05D000042 ORTHO05D000980 1.2e-06 57.0 101 30.7
BcaC02g09072 Brassica carinata HOM05D000042 ORTHO05D000980 1.2e-06 57.0 89 31.5
A09p47330 Brassica napus HOM05D000042 ORTHO05D000980 1.2e-06 57.0 101 30.7
BolC8t50562H Brassica oleracea HOM05D000042 ORTHO05D000980 1.2e-06 57.0 101 30.7
BraA09t40194Z Brassica rapa HOM05D000042 ORTHO05D000980 1.2e-06 57.0 101 30.7
CiPaw.07G154700 Carya illinoinensis HOM05D000042 ORTHO05D000980 1.2e-06 57.0 110 36.4
AL5G35380 Arabidopsis lyrata HOM05D000042 ORTHO05D000980 1.5e-06 56.6 101 30.7
AT3G54340 Arabidopsis thaliana HOM05D000042 ORTHO05D000980 1.5e-06 56.6 101 29.7
BcaB01g00204 Brassica carinata HOM05D000042 ORTHO05D000980 2.0e-06 56.2 107 30.8
C08p29560 Brassica napus HOM05D000042 ORTHO05D000980 2.0e-06 56.2 107 30.8
arahy.Tifrunner.gnm1.ann1.D4F11K Arachis hypogaea HOM05D000042 ORTHO05D000980 3.4e-06 55.5 64 43.8
CARHR164250 Cardamine hirsuta HOM05D000042 ORTHO05D000980 4.5e-06 55.1 101 29.7
Thhalv10010683m.g Eutrema salsugineum HOM05D000042 ORTHO05D000980 5.8e-06 54.7 101 28.7
A04p05440 Brassica napus HOM05D000042 ORTHO05D000980 1.0e-05 53.9 90 31.1
BraA04t16246Z Brassica rapa HOM05D000042 ORTHO05D000980 1.0e-05 53.9 90 31.1
HanXRQChr09g0269421 Helianthus annuus HOM05D000042 ORTHO05D000980 1.0e-05 53.9 109 26.6


User provided reference genes

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