Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0024229g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 9.6e-80 300.1 147 100.0
Nitab4.5_0000757g0080 Nicotiana tabacum HOM05D010939 ORTHO05D013055 3.8e-68 261.5 150 86.7
Nitab4.5_0000757g0070 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.4e-67 259.6 150 86.0
Nitab4.5_0003936g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 1.4e-57 226.5 141 80.1
Nitab4.5_0007363g0010 Nicotiana tabacum HOM05D010939 ORTHO05D013055 4.3e-56 221.5 138 79.7
CAN.G36.6 Capsicum annuum HOM05D010939 ORTHO05D013055 3.6e-50 201.8 147 67.3
Nitab4.5_0000238g0020 Nicotiana tabacum HOM05D010939 ORTHO05D013055 2.6e-40 169.1 118 69.5
Peaxi162Scf00013g00055 Petunia axillaris HOM05D010939 ORTHO05D013055 3.3e-40 168.7 146 63.0
Nitab4.5_0000238g0030 Nicotiana tabacum HOM05D010939 ORTHO05D013055 9.7e-40 167.2 88 90.9
PGSC0003DMG400031548 Solanum tuberosum HOM05D010939 ORTHO05D013055 4.2e-35 151.8 143 58.0
CAN.G36.8 Capsicum annuum HOM05D010939 ORTHO05D013055 1.0e-33 147.1 142 56.3
CAN.G36.7 Capsicum annuum HOM05D010939 ORTHO05D013055 3.0e-33 145.6 141 58.2
Peaxi162Scf00196g00211 Petunia axillaris HOM05D010939 ORTHO05D013055 8.8e-33 144.1 123 61.0
CAN.G36.9 Capsicum annuum HOM05D010939 ORTHO05D013055 1.3e-31 140.2 144 53.5
Sopen01g001430 Solanum pennellii HOM05D010939 ORTHO05D013055 8.2e-31 137.5 150 54.7
Peaxi162Scf00196g00224 Petunia axillaris HOM05D010939 ORTHO05D013055 2.7e-29 132.5 150 50.7
Solyc01g005420.2 Solanum lycopersicum HOM05D010939 ORTHO05D013055 1.3e-28 130.2 149 53.7
PGSC0003DMG400009734 Solanum tuberosum HOM05D010939 ORTHO05D013055 2.8e-18 95.9 64 68.8
Oeu030040.1 Olea europaea HOM05D000865 ORTHO05D000739 1.2e-16 90.5 138 39.9
Oeu017725.1 Olea europaea HOM05D000865 ORTHO05D000739 5.7e-16 88.2 148 37.2
Cc10_g10870 Coffea canephora HOM05D000865 ORTHO05D000739 7.5e-16 87.8 149 38.9
Cc10_g10850 Coffea canephora HOM05D000865 ORTHO05D000739 4.9e-15 85.1 149 37.6
GSVIVG01037484001 Vitis vinifera HOM05D000865 ORTHO05D000739 8.3e-15 84.3 149 36.9
SalBow7G1730 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.4e-14 82.8 147 35.4
Dinv27368 Davidia involucrata HOM05D000865 ORTHO05D000739 5.4e-14 81.6 143 37.8
Hma1.2p1_0009F.1_g006160 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 9.2e-14 80.9 145 37.2
SalBow7G3635 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.7e-13 79.3 147 34.0
SGA_v2.0_scaffold25G11102 Striga asiatica HOM05D000865 ORTHO05D000739 3.5e-13 79.0 151 34.4
Hma1.2p1_0009F.1_g006170 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 1.3e-12 77.0 146 37.0
Dinv27365 Davidia involucrata HOM05D000865 ORTHO05D000739 2.9e-12 75.9 103 41.7
Dinv27366 Davidia involucrata HOM05D000865 ORTHO05D000739 2.9e-12 75.9 103 41.7
Dinv27367 Davidia involucrata HOM05D000865 ORTHO05D000739 2.9e-12 75.9 103 41.7
Oeu017726.1 Olea europaea HOM05D000865 ORTHO05D000739 2.9e-12 75.9 141 36.2
CSS0024986 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 3.8e-12 75.5 140 35.0
DCAR_009673 Daucus carota HOM05D000865 ORTHO05D000739 5.0e-12 75.1 147 34.7
DCAR_014116 Daucus carota HOM05D000865 ORTHO05D000739 5.0e-12 75.1 141 34.8
Dinv27360 Davidia involucrata HOM05D000865 ORTHO05D000739 6.6e-12 74.7 104 40.4
Actinidia02602 Actinidia chinensis HOM05D000865 ORTHO05D000739 8.6e-12 74.3 142 35.9
Dinv27369 Davidia involucrata HOM05D000865 ORTHO05D000739 8.6e-12 74.3 148 36.5
ECA236G0710 Erigeron canadensis HOM05D000865 ORTHO05D000739 8.6e-12 74.3 141 35.5
Cc00_g25620 Coffea canephora HOM05D000865 ORTHO05D000739 1.1e-11 73.9 142 34.5
Peaxi162Scf00014g00113 Petunia axillaris HOM05D000865 ORTHO05D000739 1.1e-11 73.9 153 34.0
Peaxi162Scf00028g00117 Petunia axillaris HOM05D000865 ORTHO05D000739 1.5e-11 73.6 135 37.0
Lsat_1_v5_gn_8_103180 Lactuca sativa HOM05D000865 ORTHO05D000739 1.9e-11 73.2 141 34.8
Nitab4.5_0000051g0380 Nicotiana tabacum HOM05D000865 ORTHO05D000739 3.3e-11 72.4 145 33.8
CAN.G392.2 Capsicum annuum HOM05D000865 ORTHO05D000739 4.3e-11 72.0 141 34.8
Oeu030038.1 Olea europaea HOM05D000865 ORTHO05D000739 4.3e-11 72.0 145 35.2
Solyc11g013250.1 Solanum lycopersicum HOM05D000865 ORTHO05D000739 4.3e-11 72.0 145 33.8
Sopen11g008270 Solanum pennellii HOM05D000865 ORTHO05D000739 4.3e-11 72.0 145 33.8
SalBow7G1372 Salvia bowleyana HOM05D000865 ORTHO05D000739 5.6e-11 71.6 103 38.8
CAN.G903.3 Capsicum annuum HOM05D000865 ORTHO05D000739 1.6e-10 70.1 141 34.0
SalBow7G2794 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.6e-10 70.1 103 38.8
Actinidia04740 Actinidia chinensis HOM05D000865 ORTHO05D000739 2.1e-10 69.7 151 33.8
Actinidia14181 Actinidia chinensis HOM05D000865 ORTHO05D000739 2.1e-10 69.7 151 33.8
HanXRQChr01g0027071 Helianthus annuus HOM05D000865 ORTHO05D000739 2.1e-10 69.7 141 34.8
Hma1.2p1_0009F.1_g006150 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 2.8e-10 69.3 99 40.4
SalBow6G3095 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.8e-10 69.3 156 34.0
Lj7C325T4 Lonicera japonica HOM05D000865 ORTHO05D000739 3.6e-10 68.9 92 41.3
Peaxi162Scf00014g00122 Petunia axillaris HOM05D000865 ORTHO05D000739 3.6e-10 68.9 145 32.4
CANSAT54G1245 Cannabis sativa HOM05D000865 ORTHO05D000739 4.7e-10 68.6 143 37.8
Cc00_g10490 Coffea canephora HOM05D000865 ORTHO05D000739 4.7e-10 68.6 136 33.8
Dinv27362 Davidia involucrata HOM05D000865 ORTHO05D000739 6.1e-10 68.2 99 41.4
Migut.C01169 Erythranthe guttata HOM05D000865 ORTHO05D000739 6.1e-10 68.2 155 31.0
Migut.N03305 Erythranthe guttata HOM05D000865 ORTHO05D000739 6.1e-10 68.2 141 32.6
PGSC0003DMG400029026 Solanum tuberosum HOM05D000865 ORTHO05D000739 6.1e-10 68.2 141 34.0
Migut.B01030 Erythranthe guttata HOM05D000865 ORTHO05D000739 8.0e-10 67.8 140 34.3
Migut.N03304 Erythranthe guttata HOM05D000865 ORTHO05D000739 8.0e-10 67.8 99 36.4
Migut.N03306 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.0e-09 67.4 145 31.7
SalBow7G0931 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.8e-09 66.6 141 33.3
SalBow7G3084 Salvia bowleyana HOM05D000865 ORTHO05D000739 1.8e-09 66.6 141 33.3
SalBow7G3275 Salvia bowleyana HOM05D000865 ORTHO05D000739 2.3e-09 66.2 94 34.0
Lj4g0012125 Lotus japonicus HOM05D000865 ORTHO05D000739 3.1e-09 65.9 145 31.0
Nn4g25895 Nelumbo nucifera HOM05D000865 ORTHO05D000739 3.1e-09 65.9 144 34.7
TWI12G0020 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 4.0e-09 65.5 147 32.7
VMungo1215G3134 Vigna mungo HOM05D000865 ORTHO05D000739 4.0e-09 65.5 152 30.9
Oeu030041.1 Olea europaea HOM05D000865 ORTHO05D000739 5.2e-09 65.1 98 39.8
SalBow7G1104 Salvia bowleyana HOM05D000865 ORTHO05D000739 5.2e-09 65.1 142 31.7
Lj7P315T8 Lonicera japonica HOM05D000865 ORTHO05D000739 6.8e-09 64.7 96 40.6
Lj7P327T2 Lonicera japonica HOM05D000865 ORTHO05D000739 6.8e-09 64.7 142 32.4
SalBow7G1310 Salvia bowleyana HOM05D000865 ORTHO05D000739 6.8e-09 64.7 142 31.7
Lj7P316T4 Lonicera japonica HOM05D000865 ORTHO05D000739 1.2e-08 63.9 96 40.6
Rhsim11G0066200 Rhododendron simsii HOM05D000865 ORTHO05D000739 1.2e-08 63.9 104 40.4
Migut.C01170 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.5e-08 63.5 159 28.9
Lj7P314T10 Lonicera japonica HOM05D000865 ORTHO05D000739 2.0e-08 63.2 101 35.6
Lj7P324T13 Lonicera japonica HOM05D000865 ORTHO05D000739 2.6e-08 62.8 101 35.6
PSO591G0270 Papaver somniferum HOM05D000865 ORTHO05D000739 5.8e-08 61.6 138 31.2
TWI12G0999 Tripterygium wilfordii HOM05D000865 ORTHO05D000739 7.5e-08 61.2 139 32.4
Oeu040760.1 Olea europaea HOM05D000865 ORTHO05D000739 9.8e-08 60.8 141 31.2
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 1.3e-07 60.5 156 32.7
PSO832G1537 Papaver somniferum HOM05D000865 ORTHO05D000739 1.3e-07 60.5 138 31.2
Phvul.003G104400 Phaseolus vulgaris HOM05D000865 ORTHO05D000739 1.3e-07 60.5 152 29.6
RcHm_v2.0_Chr3g0455361 Rosa chinensis HOM05D000865 ORTHO05D000739 1.3e-07 60.5 142 31.7
MSTRG.1475 Avicennia marina HOM05D000865 ORTHO05D000739 1.7e-07 60.1 154 29.9
BolC3t16237H Brassica oleracea HOM05D000865 ORTHO05D000739 1.7e-07 60.1 147 29.9
Oeu051839.1 Olea europaea HOM05D000865 ORTHO05D000739 1.7e-07 60.1 141 30.5
A03p32640 Brassica napus HOM05D000865 ORTHO05D000739 2.2e-07 59.7 147 30.6
Lj7C313T0 Lonicera japonica HOM05D000865 ORTHO05D000739 2.2e-07 59.7 88 39.8
Os07g0670300 Oryza sativa ssp. japonica HOM05D000865 ORTHO05D000739 2.2e-07 59.7 142 31.7
PGSC0003DMG400031547 Solanum tuberosum HOM05D010939 ORTHO05D013055 2.2e-07 59.7 38 76.3
Lj7P315T14 Lonicera japonica HOM05D000865 ORTHO05D000739 2.9e-07 59.3 88 39.8
Os01g0369500 Oryza sativa ssp. japonica HOM05D000865 ORTHO05D000739 2.9e-07 59.3 143 32.2
BraA03t12432Z Brassica rapa HOM05D000865 ORTHO05D000739 3.7e-07 58.9 149 30.2
Migut.N03308 Erythranthe guttata HOM05D000865 ORTHO05D000739 3.7e-07 58.9 102 37.3
Psat1g152800 Pisum sativum HOM05D000865 ORTHO05D000739 3.7e-07 58.9 159 28.9
CiPaw.08G101400 Carya illinoinensis HOM05D000865 ORTHO05D000739 4.9e-07 58.5 99 33.3
Glyma.07G248600 Glycine max HOM05D000865 ORTHO05D000739 4.9e-07 58.5 141 29.8
Lj7C326T3 Lonicera japonica HOM05D000865 ORTHO05D000739 4.9e-07 58.5 90 41.1
Lj7P326T18 Lonicera japonica HOM05D000865 ORTHO05D000739 4.9e-07 58.5 90 41.1
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 4.9e-07 58.5 140 34.3
Dinv20011 Davidia involucrata HOM05D000039 ORTHO05D000366 6.4e-07 58.2 65 49.2
TPR.G26844 Trifolium pratense HOM05D000865 ORTHO05D000739 6.4e-07 58.2 156 32.1
Lj7P324T10 Lonicera japonica HOM05D000865 ORTHO05D000739 8.3e-07 57.8 91 37.4
Lj7P326T27 Lonicera japonica HOM05D000865 ORTHO05D000739 8.3e-07 57.8 88 38.6
Manes.08G119200 Manihot esculenta HOM05D000865 ORTHO05D000739 8.3e-07 57.8 146 31.5
Rhsim02G0010800 Rhododendron simsii HOM05D000407 ORTHO05D000739 8.3e-07 57.8 144 29.9
Actinidia09155 Actinidia chinensis HOM05D038971 ORTHO05D000739 1.1e-06 57.4 88 38.6
AL7G39600 Arabidopsis lyrata HOM05D000865 ORTHO05D000739 1.1e-06 57.4 118 30.5
FAN02G4228 Fragaria x ananassa HOM05D002691 ORTHO05D000739 1.1e-06 57.4 141 31.9
FAN05G2988 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.1e-06 57.4 143 31.5
FAN09G1327 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.1e-06 57.4 141 31.9
Rhsim02G0009700 Rhododendron simsii HOM05D000407 ORTHO05D000739 1.1e-06 57.4 150 29.3
CANSAT25G3656 Cannabis sativa HOM05D000865 ORTHO05D000739 1.4e-06 57.0 95 34.7
AUR62018083 Chenopodium quinoa HOM05D000865 ORTHO05D000739 1.4e-06 57.0 149 26.8
Migut.N03311 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.4e-06 57.0 120 28.3
Lj7P326T15 Lonicera japonica HOM05D000865 ORTHO05D000739 1.4e-06 57.0 90 41.1
Lj7P326T21 Lonicera japonica HOM05D000865 ORTHO05D000739 1.4e-06 57.0 90 41.1
Dinv30790 Davidia involucrata HOM05D000865 ORTHO05D000739 1.9e-06 56.6 137 34.3
Migut.G00172 Erythranthe guttata HOM05D000865 ORTHO05D000739 1.9e-06 56.6 159 32.7
FvH4_6g06320 Fragaria vesca HOM05D000865 ORTHO05D000739 1.9e-06 56.6 141 31.9
FAN14G4907 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.9e-06 56.6 141 31.9
Lj6g0011988 Lotus japonicus HOM05D000865 ORTHO05D000739 1.9e-06 56.6 146 28.8
BcaC06g32956 Brassica carinata HOM05D000865 ORTHO05D010535 2.4e-06 56.2 113 33.6
Medtr2g036030 Medicago truncatula HOM05D000865 ORTHO05D000739 2.4e-06 56.2 138 31.2
unitig_32.g11874 Utricularia gibba HOM05D000865 ORTHO05D000739 3.2e-06 55.8 102 33.3
Zm00001eb363490 Zea mays HOM05D000865 ORTHO05D000739 3.2e-06 55.8 153 33.3
Zm00001eb131850 Zea mays HOM05D000865 ORTHO05D000739 4.1e-06 55.5 155 30.3
CSS0039085 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 7.0e-06 54.7 96 35.4
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 9.2e-06 54.3 136 29.4
Lj7P325T13 Lonicera japonica HOM05D000865 ORTHO05D000739 9.2e-06 54.3 92 37.0
Peaxi162Scf00037g00099 Petunia axillaris HOM05D000865 ORTHO05D000739 9.2e-06 54.3 144 32.6
HPP92_026256 Vanilla planifolia HOM05D000865 ORTHO05D000739 9.2e-06 54.3 151 34.4


User provided reference genes

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