Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0023197g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 2.2e-74 282.3 153 100.0
Nitab4.5_0000977g0170 Nicotiana tabacum HOM05D011546 ORTHO05D011806 9.7e-67 256.9 153 92.2
Nitab4.5_0000436g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 1.0e-52 210.3 148 79.7
Nitab4.5_0003651g0030 Nicotiana tabacum HOM05D011546 ORTHO05D011806 3.4e-51 205.3 153 76.5
Nitab4.5_0013840g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 3.4e-51 205.3 153 77.8
Nitab4.5_0000977g0180 Nicotiana tabacum HOM05D011546 ORTHO05D011806 1.2e-37 160.2 94 92.6
Nitab4.5_0003651g0020 Nicotiana tabacum HOM05D011546 ORTHO05D011806 4.6e-32 141.7 153 58.2
Nitab4.5_0000977g0160 Nicotiana tabacum HOM05D011546 ORTHO05D011806 3.9e-31 138.7 115 70.4
Nitab4.5_0008902g0020 Nicotiana tabacum HOM05D011546 ORTHO05D011806 1.3e-26 123.6 148 55.4
Nitab4.5_0003651g0010 Nicotiana tabacum HOM05D011546 ORTHO05D011806 4.7e-21 105.1 153 50.3
PGSC0003DMG400037338 Solanum tuberosum HOM05D000047 ORTHO05D011806 1.4e-17 93.6 160 43.1
Nitab4.5_0001549g0020 Nicotiana tabacum HOM05D011546 ORTHO05D011806 9.2e-17 90.9 161 40.4
CAN.G638.76 Capsicum annuum HOM05D011546 ORTHO05D011806 3.5e-16 89.0 155 41.9
Peaxi162Scf00008g00273 Petunia axillaris HOM05D011546 ORTHO05D011806 7.8e-16 87.8 153 39.2
Nitab4.5_0001862g0020 Nicotiana tabacum HOM05D011546 ORTHO05D011806 1.6e-13 80.1 141 40.4
CAN.G1352.8 Capsicum annuum HOM05D011546 ORTHO05D011806 2.2e-10 69.7 135 41.5
Peaxi162Scf00803g00314 Petunia axillaris HOM05D045933 ORTHO05D011806 2.4e-09 66.2 137 38.7
CAN.G1352.5 Capsicum annuum HOM05D011546 ORTHO05D011806 5.4e-09 65.1 93 46.2
PGSC0003DMG400035501 Solanum tuberosum HOM05D000047 ORTHO05D011806 7.1e-09 64.7 81 48.1
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 3.5e-08 62.4 144 38.9
Sopen10g005960 Solanum pennellii HOM05D000047 ORTHO05D011806 3.5e-08 62.4 144 38.9
ClCG03G006990 Citrullus lanatus HOM05D000203 ORTHO05D000135 6.0e-08 61.6 154 31.2
Solyc10g012180.1 Solanum lycopersicum HOM05D000047 ORTHO05D011806 6.0e-08 61.6 139 37.4
Solyc10g012200.1 Solanum lycopersicum HOM05D000047 ORTHO05D011806 1.0e-07 60.8 139 36.7
CAN.G111.33 Capsicum annuum HOM05D000047 ORTHO05D011806 1.3e-07 60.5 82 45.1
MELO3C002723.2 Cucumis melo HOM05D000203 ORTHO05D000135 1.3e-07 60.5 154 29.9
PGSC0003DMG400019393 Solanum tuberosum HOM05D000047 ORTHO05D011806 1.3e-07 60.5 139 36.0
Potri.004G131100 Populus trichocarpa HOM05D000203 ORTHO05D000135 5.1e-07 58.5 156 30.1
Zm00001eb296470 Zea mays HOM05D000203 ORTHO05D000135 5.1e-07 58.5 98 34.7
Peaxi162Scf00803g00313 Petunia axillaris HOM05D045933 ORTHO05D011806 6.6e-07 58.2 138 35.5
Hma1.2p1_1051F.1_g252230 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 1.5e-06 57.0 167 27.5
Actinidia19512 Actinidia chinensis HOM05D000203 ORTHO05D000135 2.5e-06 56.2 160 25.6
CsaV3_1G032570 Cucumis sativus L. HOM05D000203 ORTHO05D000135 3.3e-06 55.8 154 29.2
Lj9C337T7 Lonicera japonica HOM05D000203 ORTHO05D000135 3.3e-06 55.8 167 28.1
Oeu017586.1 Olea europaea HOM05D000203 ORTHO05D000135 4.3e-06 55.5 142 30.3
Sopen10g006210 Solanum pennellii HOM05D000047 ORTHO05D011806 4.3e-06 55.5 139 35.3
Zm00001eb344240 Zea mays HOM05D000203 ORTHO05D000135 4.3e-06 55.5 79 39.2
Cc07_g07970 Coffea canephora HOM05D000042 ORTHO05D000028 7.3e-06 54.7 66 33.3
Solyc10g012380.2 Solanum lycopersicum HOM05D000047 ORTHO05D011806 7.3e-06 54.7 126 36.5
CARHR113860 Cardamine hirsuta HOM05D000042 ORTHO05D000028 9.6e-06 54.3 74 36.5


User provided reference genes

Program Settings