Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.0e-61 239.6 126 100.0
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.1e-55 217.6 126 89.7
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-54 216.1 126 89.7
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-53 213.8 126 90.5
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.4e-53 211.8 126 88.9
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-52 209.9 126 87.3
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.1e-51 205.3 126 84.1
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-51 204.5 126 84.9
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-50 201.8 126 84.1
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.8e-50 201.1 126 82.5
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-49 200.7 126 81.7
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-49 198.4 126 81.7
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-48 197.2 117 88.0
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-48 194.9 125 80.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-48 194.1 126 81.0
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-45 186.8 126 79.4
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.9e-45 184.1 126 75.4
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-44 183.7 122 78.7
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.4e-44 181.0 126 79.4
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.4e-43 180.3 106 86.8
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-42 177.2 115 83.5
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-41 172.2 126 75.4
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.1e-40 170.6 126 73.0
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-40 167.5 118 77.1
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-39 166.0 108 78.7
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.9e-36 155.2 106 81.1
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-36 154.8 98 83.7
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 2.4e-35 152.9 98 82.7
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.3e-35 151.0 126 69.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.6e-32 141.7 125 52.8
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-32 141.0 93 82.8
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.6e-32 141.0 93 80.6
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.6e-32 141.0 125 52.8
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-31 139.8 82 84.1
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 2.4e-30 136.3 124 51.6
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 5.3e-30 135.2 124 51.6
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-30 134.8 81 90.1
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-30 134.4 84 82.1
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 9.0e-30 134.4 124 51.6
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.2e-29 134.0 124 50.8
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-29 133.3 94 78.7
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-28 130.6 125 61.6
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 7.1e-27 124.8 113 51.3
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.3e-27 124.4 121 59.5
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-26 124.0 67 88.1
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-26 123.2 94 74.5
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 2.1e-26 123.2 117 49.6
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 3.5e-26 122.5 121 48.8
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-23 112.1 77 80.5
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-22 109.8 70 84.3
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-22 108.6 70 84.3
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-21 107.1 70 84.3
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-21 105.9 70 81.4
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-20 104.0 69 81.2
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-18 97.1 66 77.3
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-18 97.1 70 78.6
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-18 95.9 59 89.8
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-18 95.5 53 84.9
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-17 92.0 60 86.7
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.7e-17 91.7 126 50.8
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-16 90.9 81 45.7
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-15 86.3 53 77.4
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.2e-15 85.1 60 80.0
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.0e-14 81.3 69 46.4
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-13 79.0 39 92.3
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.9e-12 76.3 67 59.7
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-12 75.9 67 59.7
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-12 75.5 119 38.7
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.9e-12 75.5 66 60.6
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-12 75.1 118 38.1
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-12 74.7 116 37.9
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-11 73.9 118 39.0
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-11 73.9 116 38.8
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-11 73.6 120 37.5
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-11 73.6 119 37.0
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-11 73.6 121 36.4
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.5e-11 73.2 67 58.2
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 3.2e-11 72.8 118 33.9
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 7.1e-11 71.6 92 38.0
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-11 71.6 120 35.8
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-11 71.6 116 37.9
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.3e-11 71.2 50 78.0
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-11 71.2 120 36.7
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-10 70.9 104 39.4
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-10 70.5 120 39.2
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-10 70.1 121 37.2
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 69.7 120 35.8
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-10 69.3 110 39.1
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.5e-10 69.3 119 34.5
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-10 68.9 115 35.7
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-10 68.6 120 35.0
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-10 68.6 118 34.7
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 6.1e-10 68.6 87 37.9
Actinidia27557 Actinidia chinensis HOM05D021049 ORTHO05D001773 7.9e-10 68.2 117 28.2
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.9e-10 68.2 121 37.2
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-09 67.8 114 37.7
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-09 67.8 41 75.6
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-09 67.0 51 76.5
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-09 67.0 51 76.5
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-09 67.0 120 36.7
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 2.3e-09 66.6 118 32.2
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-09 66.6 118 36.4
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-09 66.2 116 37.9
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-09 66.2 120 35.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-09 65.9 111 36.0
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-09 65.5 117 35.9
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-09 65.5 102 37.3
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.1e-09 65.5 67 52.2
Actinidia12323 Actinidia chinensis HOM05D021049 ORTHO05D002175 8.7e-09 64.7 99 31.3
SGA_v2.0_scaffold111G31464 Striga asiatica HOM05D013482 ORTHO05D012628 8.7e-09 64.7 122 27.9
SGA_v2.0_scaffold111G31465 Striga asiatica HOM05D013482 ORTHO05D012628 8.7e-09 64.7 122 27.9
SGA_v2.0_scaffold123G33495 Striga asiatica HOM05D013482 ORTHO05D012628 8.7e-09 64.7 122 27.9
SGA_v2.0_scaffold229G43308 Striga asiatica HOM05D013482 ORTHO05D012628 8.7e-09 64.7 122 27.9
SGA_v2.0_scaffold229G43309 Striga asiatica HOM05D013482 ORTHO05D012628 8.7e-09 64.7 122 27.9
SGA_v2.0_scaffold27G11687 Striga asiatica HOM05D013482 ORTHO05D012628 8.7e-09 64.7 122 27.9
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 64.3 118 34.7
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.9 117 39.3
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.9 125 34.4
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-08 63.5 32 87.5
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 63.5 122 34.4
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 63.5 118 33.9
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-08 63.2 90 36.7
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-08 63.2 106 37.7
SGA_v2.0_scaffold38G15091 Striga asiatica HOM05D013482 ORTHO05D012628 2.5e-08 63.2 122 27.0
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-08 62.4 119 36.1
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-08 62.4 115 34.8
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 4.3e-08 62.4 119 26.9
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-08 61.2 127 33.9
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-08 61.2 117 34.2
Nitab4.5_0000936g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-07 60.1 96 35.4
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-07 60.1 87 39.1
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 2.8e-07 59.7 112 38.4
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-07 59.7 39 87.2
MSTRG.22480 Avicennia marina HOM05D013482 ORTHO05D012628 4.8e-07 58.9 119 27.7
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 6.3e-07 58.5 118 34.7
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-07 58.5 104 36.5
Nitab4.5_0005263g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-07 58.5 39 82.1
Rhsim02G0146600 Rhododendron simsii HOM05D000995 ORTHO05D001773 6.3e-07 58.5 120 24.2
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 8.2e-07 58.2 117 30.8
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.4 65 49.2
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.4 91 40.7
Rhsim07G0168400 Rhododendron simsii HOM05D000995 ORTHO05D002175 1.4e-06 57.4 105 24.8
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-06 57.0 107 32.7
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 56.6 116 34.5
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 56.2 81 46.9
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-06 55.8 123 32.5
Rhsim05G0147000 Rhododendron simsii HOM05D000995 ORTHO05D001773 4.1e-06 55.8 116 22.4
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 6.9e-06 55.1 121 33.1
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-06 55.1 94 39.4
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-06 55.1 89 41.6
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 6.9e-06 55.1 120 22.5
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.9e-06 55.1 107 31.8
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.0e-06 54.7 107 31.8


User provided reference genes

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