Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022803g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 6.9e-26 120.2 74 100.0
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 8.1e-19 96.7 77 75.3
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 5.8e-17 90.5 99 60.6
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 5.4e-15 84.0 76 71.1
Solyc06g005465.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 5.4e-15 84.0 77 72.7
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 1.2e-14 82.8 78 69.2
Nitab4.5_0003635g0040 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.5e-14 81.3 66 62.1
Sopen06g001440 Solanum pennellii HOM05D002160 ORTHO05D002012 6.0e-14 80.5 77 68.8
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 7.9e-14 80.1 75 73.3
CAN.G111.42 Capsicum annuum HOM05D002160 ORTHO05D002012 1.3e-13 79.3 77 67.5
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 1.3e-13 79.3 78 67.9
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 1.3e-13 79.3 78 67.9
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 1.3e-13 79.3 78 67.9
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 1.8e-13 79.0 78 67.9
Sopen06g032540 Solanum pennellii HOM05D002160 ORTHO05D002012 5.1e-13 77.4 78 71.8
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 1.9e-12 75.5 76 61.8
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 4.3e-12 74.3 75 69.3
Solyc04g058100.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 7.4e-12 73.6 75 69.3
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.6e-11 72.4 79 67.1
Peaxi162Scf00774g00011 Petunia axillaris HOM05D002160 ORTHO05D002012 1.6e-11 72.4 78 70.5
Sopen04g025910 Solanum pennellii HOM05D002160 ORTHO05D002012 1.6e-11 72.4 75 68.0
Solyc04g058150.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 2.1e-11 72.0 75 70.7
Sopen04g026050 Solanum pennellii HOM05D002160 ORTHO05D002012 2.1e-11 72.0 75 70.7
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 4.8e-11 70.9 79 63.3
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 4.8e-11 70.9 79 62.0
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 4.8e-11 70.9 75 69.3
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 6.2e-11 70.5 78 61.5
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.1e-10 69.7 77 62.3
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 4.0e-10 67.8 80 62.5
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 4.0e-10 67.8 77 62.3
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.3e-10 67.4 77 61.0
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 6.9e-10 67.0 79 57.0
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 6.9e-10 67.0 77 55.8
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 9.0e-10 66.6 77 58.4
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 9.0e-10 66.6 77 59.7
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.2e-09 66.2 77 59.7
SalBow3G1981 Salvia bowleyana HOM05D002160 ORTHO05D002012 1.2e-09 66.2 49 63.3
TWI79G1473 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.2e-09 66.2 76 61.8
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.5e-09 65.9 79 62.0
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.5e-09 65.9 78 60.3
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 2.0e-09 65.5 78 64.1
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 2.0e-09 65.5 74 60.8
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 3.4e-09 64.7 77 58.4
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 3.4e-09 64.7 78 59.0
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 5.8e-09 63.9 78 60.3
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 7.6e-09 63.5 80 62.5
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 7.6e-09 63.5 78 57.7
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 7.6e-09 63.5 78 59.0
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 1.7e-08 62.4 77 55.8
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 2.2e-08 62.0 80 60.0
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 2.2e-08 62.0 82 57.3
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 2.2e-08 62.0 78 57.7
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 2.9e-08 61.6 119 42.9
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 2.9e-08 61.6 78 56.4
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.8e-08 61.2 76 44.7
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 3.8e-08 61.2 78 56.4
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 3.8e-08 61.2 78 59.0
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 4.9e-08 60.8 79 55.7
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 4.9e-08 60.8 77 62.3
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 6.5e-08 60.5 81 45.7
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 1.1e-07 59.7 76 55.3
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 1.1e-07 59.7 77 64.9
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 1.4e-07 59.3 79 57.0
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.4e-07 59.3 78 55.1
Manes.08G079000 Manihot esculenta HOM05D002160 ORTHO05D002012 1.4e-07 59.3 79 58.2
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.4e-07 59.3 53 56.6
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 1.9e-07 58.9 79 57.0
Oeu051437.1 Olea europaea HOM05D002160 ORTHO05D002012 2.5e-07 58.5 66 51.5
SEGI_13620 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 3.2e-07 58.2 79 57.0
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 4.2e-07 57.8 77 59.7
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 5.5e-07 57.4 78 56.4
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 7.1e-07 57.0 76 53.9
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 9.3e-07 56.6 74 62.2
Eucgr.A01262 Eucalyptus grandis HOM05D002160 ORTHO05D002012 1.2e-06 56.2 79 51.9
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 1.2e-06 56.2 81 56.8
CiPaw.10G145400 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.1e-06 55.5 77 57.1
C03p43610 Brassica napus HOM05D002160 ORTHO05D002012 2.7e-06 55.1 79 41.8
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 2.7e-06 55.1 77 58.4
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 3.5e-06 54.7 76 52.6
Oeu011407.1 Olea europaea HOM05D002160 ORTHO05D002012 3.5e-06 54.7 80 52.5
SEGI_28885 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 4.6e-06 54.3 78 57.7
EL10Ac1g00022 Beta vulgaris HOM05D002160 ORTHO05D002012 6.0e-06 53.9 77 53.2
CARHR211040 Cardamine hirsuta HOM05D002160 ORTHO05D002012 6.0e-06 53.9 77 54.5
A03p35970 Brassica napus HOM05D002160 ORTHO05D002012 7.9e-06 53.5 79 40.5
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.9e-06 53.5 74 60.8


User provided reference genes

Program Settings