Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022754g0010 Nicotiana tabacum HOM05D000334 ORTHO05D000200 6.2e-68 260.8 142 100.0
Nitab4.5_0005550g0010 Nicotiana tabacum HOM05D000334 ORTHO05D000200 7.9e-63 243.8 143 85.3
Peaxi162Scf00078g00338 Petunia axillaris HOM05D000334 ORTHO05D000200 1.1e-37 160.2 139 61.2
Solyc11g042630.3 Solanum lycopersicum HOM05D000334 ORTHO05D000200 5.3e-27 124.8 140 59.3
PGSC0003DMG400017807 Solanum tuberosum HOM05D000334 ORTHO05D000200 9.1e-27 124.0 144 59.0
Sopen11g018780 Solanum pennellii HOM05D000334 ORTHO05D000200 2.1e-23 112.8 101 59.4
Thecc.K0002800 Theobroma cacao HOM05D000334 ORTHO05D000200 6.3e-20 101.3 97 48.5
Thecc.08G174500 Theobroma cacao HOM05D000334 ORTHO05D000200 2.4e-19 99.4 87 49.4
CiPaw.04G010400 Carya illinoinensis HOM05D000334 ORTHO05D000200 3.1e-19 99.0 84 54.8
Duzib116G0177 Durio zibethinus HOM05D000334 ORTHO05D000200 1.6e-18 96.7 95 43.2
QL09p003694 Quercus lobata HOM05D000334 ORTHO05D000200 1.6e-18 96.7 91 51.6
Duzib177G0551 Durio zibethinus HOM05D000334 ORTHO05D000200 7.7e-18 94.4 87 49.4
COL.COLO4_24588 Corchorus olitorius HOM05D000334 ORTHO05D000200 1.5e-16 90.1 89 50.6
Dinv09400 Davidia involucrata HOM05D000334 ORTHO05D000200 1.6e-15 86.7 87 48.3
TWI18G0331 Tripterygium wilfordii HOM05D000334 ORTHO05D000200 2.1e-15 86.3 91 48.4
Potri.019G074400 Populus trichocarpa HOM05D000334 ORTHO05D000200 2.8e-15 85.9 87 49.4
TAR381G1688 Trochodendron aralioides HOM05D000334 ORTHO05D000200 2.8e-15 85.9 89 43.8
Gohir.A13G117000 Gossypium hirsutum HOM05D000334 ORTHO05D000200 1.0e-14 84.0 92 43.5
Gorai.013G134600 Gossypium raimondii HOM05D000334 ORTHO05D000200 1.0e-14 84.0 92 43.5
Glyma.11G014700 Glycine max HOM05D000334 ORTHO05D000200 1.8e-14 83.2 82 50.0
Potri.013G100500 Populus trichocarpa HOM05D000334 ORTHO05D000200 4.0e-14 82.0 87 49.4
Sabra19G0085200 Salix brachista HOM05D000334 ORTHO05D000200 4.0e-14 82.0 73 57.5
CANSAT25G3550 Cannabis sativa HOM05D000334 ORTHO05D000200 5.2e-14 81.6 93 47.3
Ciclev10020850m.g Citrus clementina HOM05D000334 ORTHO05D000200 5.2e-14 81.6 92 42.4
Cc10_g09080 Coffea canephora HOM05D000334 ORTHO05D000200 5.2e-14 81.6 89 47.2
Hma1.2p1_0442F.1_g153980 Hydrangea macrophylla HOM05D000334 ORTHO05D000200 5.2e-14 81.6 92 46.7
Medtr5g008720 Medicago truncatula HOM05D000334 ORTHO05D000200 6.8e-14 81.3 71 49.3
RcHm_v2.0_Chr2g0123301 Rosa chinensis HOM05D000334 ORTHO05D000200 8.9e-14 80.9 96 41.7
GSVIVG01036397001 Vitis vinifera HOM05D000334 ORTHO05D000200 8.9e-14 80.9 81 53.1
Sabra13G0086000 Salix brachista HOM05D000334 ORTHO05D000200 1.5e-13 80.1 90 45.6
FAN28G1909 Fragaria x ananassa HOM05D000334 ORTHO05D000200 2.0e-13 79.7 95 45.3
Manes.18G119080 Manihot esculenta HOM05D000334 ORTHO05D000200 5.7e-13 78.2 86 45.3
SGA_v2.0_scaffold118G32593 Striga asiatica HOM05D000334 ORTHO05D000200 5.7e-13 78.2 70 52.9
FvH4_1g25290 Fragaria vesca HOM05D000334 ORTHO05D000200 9.8e-13 77.4 91 41.8
FAN26G2700 Fragaria x ananassa HOM05D000334 ORTHO05D000200 1.3e-12 77.0 91 42.9
Glyma.01G231800 Glycine max HOM05D000334 ORTHO05D000200 1.3e-12 77.0 76 48.7
Atru.chr13.2466 Acer truncatum HOM05D000334 ORTHO05D000200 2.2e-12 76.3 87 43.7
Cfa008101 Carpinus fangiana HOM05D000334 ORTHO05D000200 2.2e-12 76.3 95 46.3
Ca_24480_v3 Cicer arietinum L. HOM05D000334 ORTHO05D000200 2.8e-12 75.9 85 38.8
Nn5g27255 Nelumbo nucifera HOM05D000334 ORTHO05D000200 2.8e-12 75.9 86 41.9
Phvul.002G035300 Phaseolus vulgaris HOM05D000334 ORTHO05D000200 6.3e-12 74.7 75 45.3
SGA_v2.0_scaffold24G10634 Striga asiatica HOM05D000334 ORTHO05D000200 1.1e-11 73.9 88 43.2
LjContig00222g0012450 Lotus japonicus HOM05D000334 ORTHO05D000200 1.4e-11 73.6 70 48.6
VMungo1215G1088 Vigna mungo HOM05D000334 ORTHO05D000200 2.4e-11 72.8 72 45.8
TPR.G37874 Trifolium pratense HOM05D000334 ORTHO05D000200 7.0e-11 71.2 71 46.5
Lalb_Chr09g0320491 Lupinus albus HOM05D000334 ORTHO05D000200 1.6e-10 70.1 83 43.4
SalBow6G2653 Salvia bowleyana HOM05D000334 ORTHO05D000200 1.6e-10 70.1 73 47.9
SalBow6G3869 Salvia bowleyana HOM05D000334 ORTHO05D000200 1.6e-10 70.1 73 47.9
MBI06_g15297_MAGBIO Magnolia biondii HOM05D000334 ORTHO05D000200 2.0e-10 69.7 89 40.4
MBI06_g24322_MAGBIO Magnolia biondii HOM05D000334 ORTHO05D000200 2.0e-10 69.7 89 40.4
FAN23G1014 Fragaria x ananassa HOM05D034066 ORTHO05D000200 1.9e-08 63.2 87 37.9
Lsat_1_v5_gn_8_135621 Lactuca sativa HOM05D000334 ORTHO05D000200 3.6e-07 58.9 90 35.6
Haze_13935 Corylus avellana HOM05D000334 ORTHO05D000200 1.4e-06 57.0 69 42.0
Ciclev10016109m.g Citrus clementina HOM05D000334 ORTHO05D000200 2.3e-06 56.2 91 30.8
FAN19G2797 Fragaria x ananassa HOM05D000334 ORTHO05D000200 4.0e-06 55.5 62 41.9


User provided reference genes

Program Settings