Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022446g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 3.1e-148 528.5 270 100.0
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 4.8e-109 398.3 210 97.1
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 5.8e-107 391.3 210 95.7
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 2.2e-106 389.4 210 95.2
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.4e-105 386.7 210 94.3
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 2.4e-105 386.0 210 93.8
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 3.2e-105 385.6 202 98.0
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 7.1e-105 384.4 210 93.8
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 7.9e-104 380.9 210 92.4
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 1.3e-103 380.2 213 93.0
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 1.3e-93 347.1 210 85.2
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 9.0e-92 340.9 210 82.4
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 7.6e-91 337.8 210 82.4
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 1.0e-90 337.4 210 82.9
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 1.7e-90 336.7 210 81.9
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 2.2e-90 336.3 210 81.9
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 8.4e-90 334.3 210 81.9
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 1.1e-89 334.0 210 82.9
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.1e-89 334.0 210 81.4
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 2.5e-89 332.8 210 81.4
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 3.2e-89 332.4 210 81.4
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 7.1e-89 331.3 214 79.0
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 9.3e-89 330.9 210 81.0
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 9.3e-89 330.9 210 81.0
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.2e-88 330.5 210 81.0
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 1.6e-88 330.1 210 81.0
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 1.6e-88 330.1 210 80.0
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 2.1e-88 329.7 210 80.5
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 2.7e-88 329.3 237 73.8
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 3.5e-88 328.9 208 80.8
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 3.5e-88 328.9 210 81.4
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 4.6e-88 328.6 210 81.0
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 4.6e-88 328.6 210 81.0
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 1.3e-87 327.0 210 81.4
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.3e-87 327.0 210 81.4
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 2.3e-87 326.2 210 78.6
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 3.0e-87 325.9 210 81.0
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 3.0e-87 325.9 210 79.0
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 5.1e-87 325.1 210 79.0
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 1.1e-86 323.9 210 79.0
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 1.5e-86 323.6 210 79.5
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 1.9e-86 323.2 209 79.4
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 1.9e-86 323.2 210 80.0
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 4.3e-86 322.0 210 78.6
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 7.4e-86 321.2 237 70.0
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 7.4e-86 321.2 210 79.0
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 7.4e-86 321.2 210 78.1
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 7.4e-86 321.2 210 80.0
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 1.6e-85 320.1 210 79.5
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.6e-85 320.1 210 79.5
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.6e-85 320.1 210 79.5
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.6e-85 320.1 210 79.5
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.6e-85 320.1 210 79.5
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 1.6e-85 320.1 210 78.6
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 2.8e-85 319.3 210 78.6
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.8e-85 319.3 210 77.6
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 3.7e-85 318.9 210 79.5
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 4.8e-85 318.5 210 78.6
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 6.3e-85 318.2 210 77.6
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 6.3e-85 318.2 210 77.6
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 8.2e-85 317.8 210 78.6
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 8.2e-85 317.8 210 77.1
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 8.2e-85 317.8 210 77.1
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 1.4e-84 317.0 210 80.0
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 1.4e-84 317.0 210 78.1
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 1.8e-84 316.6 210 77.6
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.4e-84 316.2 210 78.1
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 3.1e-84 315.8 210 78.1
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 3.1e-84 315.8 210 77.6
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 3.1e-84 315.8 210 79.0
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 3.1e-84 315.8 210 77.1
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 4.1e-84 315.5 205 79.0
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 4.1e-84 315.5 215 76.3
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 9.0e-84 314.3 210 76.2
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 9.0e-84 314.3 237 71.7
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 1.2e-83 313.9 210 76.7
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 1.2e-83 313.9 210 78.1
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 2.0e-83 313.2 210 74.8
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 2.0e-83 313.2 210 76.7
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 1.3e-82 310.5 211 76.8
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 1.3e-82 310.5 213 77.0
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 1.7e-82 310.1 210 76.2
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 3.8e-82 308.9 212 77.4
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 5.0e-82 308.5 212 76.9
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 8.5e-82 307.8 213 77.5
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 1.1e-81 307.4 211 76.8
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 1.1e-81 307.4 210 75.7
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 1.4e-81 307.0 211 76.8
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 2.1e-80 303.1 212 75.9
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.7e-80 302.8 210 76.2
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 3.6e-80 302.4 211 75.4
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 3.6e-80 302.4 211 75.4
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 6.1e-80 301.6 205 77.1
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 6.1e-80 301.6 205 77.1
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 1.0e-79 300.8 210 74.3
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 1.4e-79 300.4 210 75.2
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 1.5e-78 297.0 237 66.7
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 3.3e-78 295.8 210 71.4
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 9.7e-78 294.3 237 65.8
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 1.7e-77 293.5 210 72.9
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 6.3e-77 291.6 261 61.7
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 1.8e-76 290.0 237 64.6
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 1.5e-75 287.0 282 58.5
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 3.4e-75 285.8 212 70.8
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 1.0e-74 284.3 215 71.6
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 1.7e-74 283.5 203 70.4
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 2.9e-74 282.7 210 69.5
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 7.2e-73 278.1 211 70.6
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 2.7e-72 276.2 185 80.5
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 3.0e-71 272.7 182 78.0
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 2.6e-70 269.6 210 68.1
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 5.3e-68 261.9 356 48.3
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 9.1e-68 261.2 237 60.3
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 9.1e-68 261.2 210 66.2
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.5e-67 260.4 210 64.3
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 3.8e-66 255.8 210 64.8
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 3.2e-65 252.7 211 66.4
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 6.1e-64 248.4 322 47.5
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 2.3e-63 246.5 210 67.1
CAN.G4608.1 Capsicum annuum HOM05D003653 ORTHO05D004249 2.3e-63 246.5 130 96.9
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 7.4e-62 241.5 211 61.6
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 9.7e-62 241.1 213 63.8
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 2.6e-59 233.0 324 47.8
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 1.0e-58 231.1 236 52.5
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 2.5e-57 226.5 212 63.2
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 8.0e-56 221.5 158 74.7
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 2.8e-45 186.4 230 52.6
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.7e-43 179.9 129 73.6
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 8.9e-39 164.9 287 36.9
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.5e-38 164.1 98 81.6
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 2.5e-33 146.7 108 74.1
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 1.7e-26 124.0 237 35.9
Gohir.D08G133700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.5e-25 120.9 104 61.5
Gorai.004G136800 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.2e-24 117.9 115 56.5
Cfa023740 Carpinus fangiana HOM05D003653 ORTHO05D004249 1.1e-23 114.8 238 33.6
Lsat_1_v5_gn_7_30301 Lactuca sativa HOM05D003653 ORTHO05D004249 2.5e-17 93.6 68 75.0
Lsat_1_v5_gn_2_18300 Lactuca sativa HOM05D003653 ORTHO05D004249 1.4e-15 87.8 68 73.5
CSS0022673 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.9e-12 77.4 50 76.0
Lsat_1_v5_gn_2_26321 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-10 70.9 45 80.0
Lsat_1_v5_gn_4_28660 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-10 70.9 45 80.0
Lsat_1_v5_gn_6_63001 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-10 70.9 45 80.0
Lsat_1_v5_gn_7_58641 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-10 70.9 45 80.0
Lsat_1_v5_gn_2_82101 Lactuca sativa HOM05D003653 ORTHO05D004249 5.1e-10 69.3 45 77.8
Lsat_1_v5_gn_5_93841 Lactuca sativa HOM05D003653 ORTHO05D004249 5.1e-10 69.3 45 77.8
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.9e-09 67.4 142 40.1
Haze_16165 Corylus avellana HOM05D003653 ORTHO05D004249 1.1e-07 61.6 177 32.2
Lsat_1_v5_gn_2_35921 Lactuca sativa HOM05D003653 ORTHO05D004249 3.1e-07 60.1 41 75.6


User provided reference genes

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