Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022338g0010 Nicotiana tabacum HOM05D000207 ORTHO05D004473 6.7e-111 404.1 208 100.0
Peaxi162Scf00253g00141 Petunia axillaris HOM05D000207 ORTHO05D004473 8.5e-98 360.5 203 93.1
Nitab4.5_0001313g0010 Nicotiana tabacum HOM05D000207 ORTHO05D004473 2.8e-93 345.5 198 90.9
Nitab4.5_0003408g0150 Nicotiana tabacum HOM05D000207 ORTHO05D004473 6.5e-90 334.3 203 85.7
Peaxi162Scf00398g00725 Petunia axillaris HOM05D000207 ORTHO05D004473 8.5e-90 334.0 203 85.7
Nitab4.5_0000593g0180 Nicotiana tabacum HOM05D000207 ORTHO05D004473 1.2e-88 330.1 203 84.7
CAN.G135.49 Capsicum annuum HOM05D000207 ORTHO05D004473 1.4e-87 326.6 203 83.7
Solyc11g007760.2 Solanum lycopersicum HOM05D000207 ORTHO05D004473 8.8e-87 323.9 204 83.8
Sopen11g003620 Solanum pennellii HOM05D000207 ORTHO05D004473 8.8e-87 323.9 204 83.8
PGSC0003DMG402027355 Solanum tuberosum HOM05D000207 ORTHO05D004473 8.8e-87 323.9 204 84.3
Dinv31278 Davidia involucrata HOM05D001491 ORTHO05D004473 5.3e-84 314.7 203 83.7
PGSC0003DMG400016913 Solanum tuberosum HOM05D000207 ORTHO05D004473 2.6e-83 312.4 200 83.5
Cc02_g10410 Coffea canephora HOM05D000207 ORTHO05D004473 1.7e-82 309.7 203 81.3
Solyc03g071750.3 Solanum lycopersicum HOM05D000207 ORTHO05D004473 3.8e-82 308.5 203 81.3
Sopen03g020030 Solanum pennellii HOM05D000207 ORTHO05D004473 3.8e-82 308.5 203 81.3
Atru.chr12.932 Acer truncatum HOM05D000207 ORTHO05D004473 5.0e-82 308.1 204 81.9
CSS0030375 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 8.5e-82 307.4 203 79.8
MSTRG.27513 Avicennia marina HOM05D000207 ORTHO05D004473 1.2e-80 303.5 202 79.2
CSS0023838 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 1.2e-80 303.5 203 78.8
Thecc.10G093700 Theobroma cacao HOM05D000207 ORTHO05D004473 6.1e-80 301.2 204 79.9
Oeu047513.2 Olea europaea HOM05D000207 ORTHO05D004473 8.0e-80 300.8 203 77.8
Hma1.2p1_1625F.1_g294310 Hydrangea macrophylla HOM05D000207 ORTHO05D004473 1.8e-79 299.7 204 79.9
CAN.G316.5 Capsicum annuum HOM05D000207 ORTHO05D004473 5.2e-79 298.1 203 79.8
GSVIVG01034673001 Vitis vinifera HOM05D000207 ORTHO05D004473 1.2e-78 297.0 204 79.4
Cpa.g.sc128.64 Carica papaya HOM05D000207 ORTHO05D004473 2.6e-78 295.8 203 77.8
Duzib114G0299 Durio zibethinus HOM05D000207 ORTHO05D004473 4.4e-78 295.0 205 79.0
Migut.F01666 Erythranthe guttata HOM05D000207 ORTHO05D004473 2.2e-77 292.7 205 76.6
CSS0024824 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 3.7e-77 292.0 203 78.3
RcHm_v2.0_Chr1g0361861 Rosa chinensis HOM05D000207 ORTHO05D004473 1.1e-76 290.4 204 76.0
TWI38G1628 Tripterygium wilfordii HOM05D000207 ORTHO05D004473 1.1e-76 290.4 203 77.8
MSTRG.9118 Avicennia marina HOM05D000207 ORTHO05D004473 1.6e-75 286.6 201 76.1
FvH4_7g18280 Fragaria vesca HOM05D000207 ORTHO05D004473 2.0e-75 286.2 204 75.5
Manes.10G054000 Manihot esculenta HOM05D000207 ORTHO05D004473 2.0e-75 286.2 203 71.9
unitig_899.g14484 Utricularia gibba HOM05D000207 ORTHO05D004473 2.0e-75 286.2 205 74.1
FAN06G3011 Fragaria x ananassa HOM05D000207 ORTHO05D004473 2.7e-75 285.8 204 75.5
FAN10G1843 Fragaria x ananassa HOM05D000207 ORTHO05D004473 2.7e-75 285.8 204 75.5
Lj5g0004677 Lotus japonicus HOM05D000207 ORTHO05D004473 4.5e-75 285.0 206 76.7
Cfa011202 Carpinus fangiana HOM05D000207 ORTHO05D004473 1.3e-74 283.5 204 76.5
TPR.G21921 Trifolium pratense HOM05D000207 ORTHO05D004473 2.2e-74 282.7 203 75.4
BcaB04g21234 Brassica carinata HOM05D000207 ORTHO05D004473 2.9e-74 282.3 204 73.0
Migut.F00925 Erythranthe guttata HOM05D000207 ORTHO05D004473 2.9e-74 282.3 204 76.0
AL3G21960 Arabidopsis lyrata HOM05D000207 ORTHO05D004473 2.5e-73 279.3 203 74.4
CANSAT56G2199 Cannabis sativa HOM05D000207 ORTHO05D004473 2.5e-73 279.3 204 74.5
FAN01G1531 Fragaria x ananassa HOM05D000207 ORTHO05D004473 3.2e-73 278.9 204 75.0
FAN01G2015 Fragaria x ananassa HOM05D000207 ORTHO05D004473 3.2e-73 278.9 204 75.0
Hund06744 Selenicereus undatus HOM05D000207 ORTHO05D004473 3.2e-73 278.9 202 75.2
CSS0035486 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004473 4.2e-73 278.5 200 76.0
AT3G10540 Arabidopsis thaliana HOM05D000207 ORTHO05D004473 1.2e-72 276.9 203 73.9
Carub.0003s0978 Capsella rubella HOM05D000207 ORTHO05D004473 1.6e-72 276.6 203 73.9
Manes.07G093000 Manihot esculenta HOM05D000207 ORTHO05D004473 1.6e-72 276.6 203 71.9
THA.LOC104816450 Tarenaya hassleriana HOM05D000207 ORTHO05D004473 2.1e-72 276.2 204 72.1
Sabra10G0180600 Salix brachista HOM05D000207 ORTHO05D004473 2.7e-72 275.8 204 74.5
SGA_v2.0_scaffold13G06467 Striga asiatica HOM05D000207 ORTHO05D004473 2.7e-72 275.8 228 65.4
EL10As9g23947 Beta vulgaris HOM05D000207 ORTHO05D004473 4.7e-72 275.0 203 71.9
ClCG05G021500 Citrullus lanatus HOM05D000207 ORTHO05D004473 1.0e-71 273.9 204 72.1
unitig_736.g22534 Utricularia gibba HOM05D000207 ORTHO05D004473 1.0e-71 273.9 205 70.2
Eucgr.J01029 Eucalyptus grandis HOM05D000207 ORTHO05D004473 1.4e-71 273.5 204 72.1
Potri.010G232800 Populus trichocarpa HOM05D000207 ORTHO05D004473 1.8e-71 273.1 204 73.5
Ah.04g163540 Amaranthus hybridus HOM05D000207 ORTHO05D004473 4.0e-71 271.9 203 71.9
Actinidia06711 Actinidia chinensis HOM05D000207 ORTHO05D004473 5.2e-71 271.6 203 74.4
CiPaw.14G027400 Carya illinoinensis HOM05D000207 ORTHO05D004473 1.5e-70 270.0 205 73.2
Sc20g0001400 Simmondsia chinensis HOM05D000207 ORTHO05D004473 2.0e-70 269.6 203 73.4
Lj2C25T7 Lonicera japonica HOM05D000207 ORTHO05D004473 2.6e-70 269.2 204 73.0
A05p38630 Brassica napus HOM05D005033 ORTHO05D004473 7.5e-70 267.7 203 70.0
BraA05t22653Z Brassica rapa HOM05D000207 ORTHO05D004473 7.5e-70 267.7 203 70.0
HanXRQChr08g0218051 Helianthus annuus HOM05D000207 ORTHO05D004473 7.5e-70 267.7 205 72.2
SGA_v2.0_scaffold13G06504 Striga asiatica HOM05D000207 ORTHO05D004473 7.5e-70 267.7 204 74.5
BcaC05g29451 Brassica carinata HOM05D000207 ORTHO05D004473 1.3e-69 266.9 203 69.5
BcaC05g29453 Brassica carinata HOM05D005033 ORTHO05D004473 1.3e-69 266.9 203 69.5
C05p57510 Brassica napus HOM05D005033 ORTHO05D004473 1.7e-69 266.5 203 69.5
BolC5t34408H Brassica oleracea HOM05D005033 ORTHO05D004473 1.7e-69 266.5 203 69.5
HanXRQChr12g0368411 Helianthus annuus HOM05D000207 ORTHO05D004473 1.7e-69 266.5 205 69.8
PGR044G1457 Punica granatum HOM05D000207 ORTHO05D004473 1.7e-69 266.5 202 68.8
Glyma.10G200600 Glycine max HOM05D000207 ORTHO05D004473 2.2e-69 266.2 203 72.4
Lalb_Chr06g0170081 Lupinus albus HOM05D000207 ORTHO05D004473 2.8e-69 265.8 202 72.3
Rhsim03G0110400 Rhododendron simsii HOM05D000207 ORTHO05D004473 1.1e-68 263.8 203 70.9
MELO3C012376.2 Cucumis melo HOM05D000207 ORTHO05D004473 1.8e-68 263.1 206 69.9
AUR62043740 Chenopodium quinoa HOM05D000207 ORTHO05D004473 2.4e-68 262.7 203 70.4
Ca_10467_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004473 3.1e-68 262.3 204 72.1
Potri.008G028800 Populus trichocarpa HOM05D000207 ORTHO05D004473 3.1e-68 262.3 204 71.6
Lalb_Chr02g0151221 Lupinus albus HOM05D000207 ORTHO05D004473 5.4e-68 261.5 203 71.4
vmacro07211 Vaccinium macrocarpon HOM05D000207 ORTHO05D004473 5.4e-68 261.5 203 70.9
FAN10G1984 Fragaria x ananassa HOM05D000207 ORTHO05D004473 7.0e-68 261.2 215 68.4
Glyma.20G190000 Glycine max HOM05D000207 ORTHO05D004473 7.0e-68 261.2 203 71.4
BcaNung05806 Brassica carinata HOM05D000146 ORTHO05D004473 1.6e-67 260.0 204 68.6
BolC1t05385H Brassica oleracea HOM05D000207 ORTHO05D004473 1.6e-67 260.0 204 68.6
A01p41690 Brassica napus HOM05D005033 ORTHO05D004473 2.7e-67 259.2 204 68.6
BraA01t04243Z Brassica rapa HOM05D000207 ORTHO05D004473 2.7e-67 259.2 204 68.6
ECA233G1732 Erigeron canadensis HOM05D000038 ORTHO05D004473 3.5e-67 258.8 205 69.3
Duzib128G1411 Durio zibethinus HOM05D000207 ORTHO05D004473 4.5e-67 258.5 197 73.1
TAR623G1710 Trochodendron aralioides HOM05D000207 ORTHO05D004473 4.5e-67 258.5 204 70.6
Lsat_1_v5_gn_8_22900 Lactuca sativa HOM05D000207 ORTHO05D004473 1.0e-66 257.3 207 69.1
AUR62043367 Chenopodium quinoa HOM05D000207 ORTHO05D004473 2.3e-66 256.1 203 69.5
DCAR_006380 Daucus carota HOM05D000207 ORTHO05D004473 3.8e-66 255.4 204 67.6
Sp3g08820 Schrenkiella parvula HOM05D000207 ORTHO05D004473 3.8e-66 255.4 204 68.1
Gohir.A05G394300 Gossypium hirsutum HOM05D000207 ORTHO05D004473 5.0e-66 255.0 204 70.1
Aa31LG3G3390 Aethionema arabicum HOM05D000207 ORTHO05D004473 6.6e-66 254.6 204 69.1
CiPaw.13G034800 Carya illinoinensis HOM05D000207 ORTHO05D004473 8.6e-66 254.2 205 70.2
Medtr1g090917 Medicago truncatula HOM05D000207 ORTHO05D004473 8.6e-66 254.2 204 69.1
Phvul.007G144600 Phaseolus vulgaris HOM05D000207 ORTHO05D004473 1.1e-65 253.8 203 69.0
Actinidia18562 Actinidia chinensis HOM05D000207 ORTHO05D004473 1.5e-65 253.4 200 70.5
MD01G1098600 Malus domestica HOM05D000207 ORTHO05D004473 1.5e-65 253.4 204 68.6
Lalb_Chr19g0129301 Lupinus albus HOM05D000207 ORTHO05D004473 7.2e-65 251.1 203 69.0
MD07G1165300 Malus domestica HOM05D000207 ORTHO05D004473 1.2e-64 250.4 204 67.6
CsaV3_5G035750 Cucumis sativus L. HOM05D000207 ORTHO05D004473 1.6e-64 250.0 204 66.7
Thhalv10020612m.g Eutrema salsugineum HOM05D000207 ORTHO05D004473 1.6e-64 250.0 204 68.1
Prupe.2G204000 Prunus persica HOM05D000207 ORTHO05D004473 1.6e-64 250.0 204 68.6
SalBow4G0022 Salvia bowleyana HOM05D000207 ORTHO05D004473 2.8e-64 249.2 173 74.0
COL.COLO4_07609 Corchorus olitorius HOM05D001491 ORTHO05D004473 4.7e-64 248.4 185 73.5
Aqoxy2G01506 Aquilegia oxysepala HOM05D000207 ORTHO05D004473 8.0e-64 247.7 204 64.7
CARHR085060 Cardamine hirsuta HOM05D000207 ORTHO05D004473 3.0e-63 245.7 204 66.7
VMungo0720G2759 Vigna mungo HOM05D000207 ORTHO05D004473 3.0e-63 245.7 203 67.5
Psat6g174800 Pisum sativum HOM05D000207 ORTHO05D004473 4.0e-63 245.4 204 69.1
QL04p040407 Quercus lobata HOM05D000207 ORTHO05D004473 6.8e-63 244.6 204 68.6
Thhalv10013385m.g Eutrema salsugineum HOM05D000207 ORTHO05D004473 1.2e-62 243.8 205 65.9
Gohir.A01G129100 Gossypium hirsutum HOM05D000207 ORTHO05D004473 1.2e-62 243.8 205 67.8
Gohir.D01G118700 Gossypium hirsutum HOM05D000207 ORTHO05D004473 1.5e-62 243.4 205 67.8
Gorai.002G144800 Gossypium raimondii HOM05D000207 ORTHO05D004473 1.5e-62 243.4 205 67.8
Sed0002916 Sechium edule HOM05D000207 ORTHO05D004473 2.0e-62 243.0 204 64.2
Sp6g38240 Schrenkiella parvula HOM05D000207 ORTHO05D004473 3.4e-62 242.3 205 66.3
CARHR208760 Cardamine hirsuta HOM05D000207 ORTHO05D004473 1.7e-61 240.0 205 64.9
A10p31580 Brassica napus HOM05D000207 ORTHO05D004473 2.2e-61 239.6 207 65.2
C09p72250 Brassica napus HOM05D000207 ORTHO05D004473 2.2e-61 239.6 207 65.2
BolC9t59969H Brassica oleracea HOM05D000207 ORTHO05D004473 2.2e-61 239.6 207 65.2
BraA10t45204Z Brassica rapa HOM05D000207 ORTHO05D004473 2.2e-61 239.6 207 65.2
TAR633G0321 Trochodendron aralioides HOM05D001933 ORTHO05D004473 2.2e-61 239.6 174 74.7
BcaC06g32162 Brassica carinata HOM05D000207 ORTHO05D004473 4.9e-61 238.4 205 65.4
arahy.Tifrunner.gnm1.ann1.I5SWNV Arachis hypogaea HOM05D000207 ORTHO05D004473 1.4e-60 236.9 203 66.5
Carub.0006s0345 Capsella rubella HOM05D000207 ORTHO05D004473 1.4e-60 236.9 205 64.9
arahy.Tifrunner.gnm1.ann1.MV6I8X Arachis hypogaea HOM05D000207 ORTHO05D004473 1.8e-60 236.5 203 66.5
Gohir.D05G291500 Gossypium hirsutum HOM05D000207 ORTHO05D004473 2.0e-59 233.0 204 64.7
Gorai.009G307200 Gossypium raimondii HOM05D000207 ORTHO05D004473 2.0e-59 233.0 204 64.7
AL6G14150 Arabidopsis lyrata HOM05D000207 ORTHO05D004473 3.5e-59 232.3 205 64.4
Aa31LG11G5380 Aethionema arabicum HOM05D000207 ORTHO05D004473 1.0e-58 230.7 206 63.6
PSO339G2723 Papaver somniferum HOM05D000207 ORTHO05D004473 2.9e-58 229.2 208 63.5
PSO384G5087 Papaver somniferum HOM05D000207 ORTHO05D004473 2.9e-58 229.2 208 63.5
DCAR_014270 Daucus carota HOM05D000207 ORTHO05D004473 1.1e-57 227.3 203 62.6
FAN03G1778 Fragaria x ananassa HOM05D000207 ORTHO05D004473 1.1e-57 227.3 203 65.0
Gohir.A05G290300 Gossypium hirsutum HOM05D000207 ORTHO05D004473 3.3e-57 225.7 204 63.2
Os01g0872800 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004473 1.5e-54 216.9 206 60.2
Nn2g13951 Nelumbo nucifera HOM05D000207 ORTHO05D004473 2.0e-54 216.5 204 60.3
Zm00001eb146330 Zea mays HOM05D000207 ORTHO05D004473 9.8e-54 214.2 206 58.3
MBI17_g17191_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004473 1.7e-53 213.4 205 59.5
CDE02G2680 Ceratophyllum demersum HOM05D000146 ORTHO05D004473 1.0e-50 204.1 207 58.9
Nn6g35103 Nelumbo nucifera HOM05D000207 ORTHO05D004473 3.6e-48 195.7 173 60.7
PSO339G3642 Papaver somniferum HOM05D000207 ORTHO05D004473 4.7e-48 195.3 201 56.7
Gohir.A05G394175 Gossypium hirsutum HOM05D000207 ORTHO05D004473 8.0e-48 194.5 173 62.4
CDE08G1512 Ceratophyllum demersum HOM05D000207 ORTHO05D004473 1.2e-46 190.7 203 56.7
SEGI_25768 Sequoiadendron giganteum HOM05D000207 ORTHO05D004473 1.9e-44 183.3 208 49.5
HPP92_009267 Vanilla planifolia HOM05D000207 ORTHO05D004473 2.1e-43 179.9 199 50.8
PSO063G1339 Papaver somniferum HOM05D000207 ORTHO05D004473 2.3e-39 166.4 170 55.9
Haze_02644 Corylus avellana HOM05D000207 ORTHO05D004473 2.0e-38 163.3 101 83.2
HPP92_025159 Vanilla planifolia HOM05D000207 ORTHO05D004473 1.4e-36 157.1 155 55.5
Hma1.2p1_0361F.1_g135960 Hydrangea macrophylla HOM05D000207 ORTHO05D048346 5.6e-33 145.2 90 85.6
Oeu015042.1 Olea europaea HOM05D000207 ORTHO05D048346 1.6e-32 143.7 91 82.4
Hma1.2p1_0361F.1_g135950 Hydrangea macrophylla HOM05D000207 ORTHO05D004473 6.2e-32 141.7 101 73.3
Lj3A934G30 Lonicera japonica HOM05D000207 ORTHO05D004473 4.9e-29 132.1 101 69.3
Ciclev10031678m.g Citrus clementina HOM05D000207 ORTHO05D004473 2.7e-27 126.3 102 67.6
SMO367G0096 Selaginella moellendorffii HOM05D000207 ORTHO05D004473 2.5e-25 119.8 213 36.2
AT5G04510 Arabidopsis thaliana HOM05D000207 ORTHO05D004473 2.2e-21 106.7 103 56.3
Psat0s2832g0040 Pisum sativum HOM05D000207 ORTHO05D004473 1.0e-18 97.8 84 63.1
AagrBONN_evm.TU.Sc2ySwM_368.3398 Anthoceros agrestis HOM05D000207 ORTHO05D004473 3.0e-18 96.3 298 28.2
Mapoly0015s0182 Marchantia polymorpha HOM05D000207 ORTHO05D004473 2.0e-14 83.6 215 32.1
Sed0021073 Sechium edule HOM05D000207 ORTHO05D004473 3.0e-10 69.7 43 65.1
Psat0s1617g0040 Pisum sativum HOM05D000207 ORTHO05D004473 3.9e-10 69.3 37 78.4
Psat3g177600 Pisum sativum HOM05D000961 ORTHO05D000841 5.1e-10 68.9 58 70.7
Psat7g106640 Pisum sativum HOM05D004625 ORTHO05D006054 5.1e-10 68.9 57 70.2
AagrBONN_evm.TU.Sc2ySwM_362.2851 Anthoceros agrestis HOM05D000146 ORTHO05D004473 2.8e-08 63.2 44 59.1


User provided reference genes

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