Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022318g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.5e-89 332.8 168 100.0
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 2.0e-81 305.8 167 91.0
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 4.2e-79 298.1 217 74.7
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 3.8e-72 275.0 216 68.1
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 3.8e-72 275.0 216 68.1
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 6.5e-72 274.2 216 68.1
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 7.1e-71 270.8 217 66.4
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 9.3e-71 270.4 216 67.1
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 9.3e-71 270.4 216 66.7
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.7e-70 268.9 216 66.2
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.5e-70 268.5 216 65.7
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 6.0e-70 267.7 216 65.7
Dinv23553 Davidia involucrata HOM05D000626 ORTHO05D003868 1.3e-69 266.5 216 66.2
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 2.3e-69 265.8 216 65.7
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 3.0e-69 265.4 216 64.4
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 3.9e-69 265.0 193 70.5
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 5.1e-69 264.6 216 64.8
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 6.7e-69 264.2 216 64.4
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.5e-68 263.1 216 64.8
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 2.5e-68 262.3 215 65.1
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 4.3e-68 261.5 216 64.4
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 5.7e-68 261.2 215 63.7
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 7.4e-68 260.8 216 63.9
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 7.4e-68 260.8 216 63.0
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 1.3e-67 260.0 216 63.9
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 1.6e-67 259.6 216 63.4
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 2.1e-67 259.2 216 62.5
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 2.8e-67 258.8 216 63.0
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 3.7e-67 258.5 217 63.1
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 3.7e-67 258.5 217 63.6
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 4.8e-67 258.1 216 63.4
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 4.8e-67 258.1 216 63.4
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 4.8e-67 258.1 216 63.9
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 4.8e-67 258.1 217 63.1
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 6.3e-67 257.7 216 62.5
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 6.3e-67 257.7 216 63.0
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 8.2e-67 257.3 216 64.4
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 8.2e-67 257.3 216 63.9
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 8.2e-67 257.3 211 64.5
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 8.2e-67 257.3 216 63.9
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 8.2e-67 257.3 216 63.0
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.1e-66 256.9 216 64.4
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 1.1e-66 256.9 216 63.0
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.1e-66 256.9 216 63.0
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 1.1e-66 256.9 216 63.9
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 1.1e-66 256.9 216 63.9
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.1e-66 256.9 216 63.0
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 1.4e-66 256.5 216 63.9
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.4e-66 256.5 217 62.7
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.4e-66 256.5 216 63.0
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.4e-66 256.5 216 63.0
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.4e-66 256.5 216 62.5
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 1.8e-66 256.1 215 63.7
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.8e-66 256.1 216 62.5
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.8e-66 256.1 216 62.0
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.8e-66 256.1 216 63.9
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 2.4e-66 255.8 216 61.6
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 2.4e-66 255.8 216 61.6
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 2.4e-66 255.8 216 61.6
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 2.4e-66 255.8 216 63.4
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 2.4e-66 255.8 216 62.5
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 2.4e-66 255.8 215 63.3
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 2.4e-66 255.8 216 62.5
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 3.1e-66 255.4 216 62.5
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 4.1e-66 255.0 216 61.6
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 4.1e-66 255.0 216 61.6
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 4.1e-66 255.0 216 61.6
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 4.1e-66 255.0 216 61.6
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 5.3e-66 254.6 216 61.1
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 5.3e-66 254.6 216 62.5
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 5.3e-66 254.6 216 61.1
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 6.9e-66 254.2 216 61.1
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 6.9e-66 254.2 217 62.7
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 9.0e-66 253.8 217 60.8
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 9.0e-66 253.8 216 61.1
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 9.0e-66 253.8 216 62.0
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 9.0e-66 253.8 216 62.5
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 1.2e-65 253.4 216 61.1
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.2e-65 253.4 216 61.1
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 1.2e-65 253.4 216 63.0
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 1.2e-65 253.4 216 63.0
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 1.2e-65 253.4 217 61.8
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 1.2e-65 253.4 216 62.0
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 1.5e-65 253.1 214 61.7
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.5e-65 253.1 216 62.0
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 1.5e-65 253.1 216 63.0
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 2.0e-65 252.7 214 63.1
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 2.0e-65 252.7 216 61.6
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 2.0e-65 252.7 216 61.6
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 2.0e-65 252.7 216 62.5
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 2.0e-65 252.7 216 62.5
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.0e-65 252.7 217 62.7
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 2.6e-65 252.3 216 60.6
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 2.6e-65 252.3 216 61.6
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 2.6e-65 252.3 216 62.0
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 3.4e-65 251.9 216 60.6
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 3.4e-65 251.9 216 61.1
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 3.4e-65 251.9 216 62.0
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 4.5e-65 251.5 217 62.7
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 5.9e-65 251.1 216 60.2
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 5.9e-65 251.1 216 60.6
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.9e-65 251.1 216 61.6
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 5.9e-65 251.1 216 62.5
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 1.0e-64 250.4 216 61.6
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 1.0e-64 250.4 217 61.3
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 1.3e-64 250.0 215 62.3
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.3e-64 250.0 216 61.1
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.3e-64 250.0 216 60.6
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 1.7e-64 249.6 216 62.0
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.8e-64 248.4 215 60.9
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 3.8e-64 248.4 216 60.2
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 3.8e-64 248.4 249 55.8
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 6.5e-64 247.7 216 59.7
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 6.5e-64 247.7 217 62.2
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 6.5e-64 247.7 216 61.1
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 8.4e-64 247.3 216 59.3
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 1.1e-63 246.9 216 60.2
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.9e-63 246.1 216 59.7
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 2.5e-63 245.7 216 60.2
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 2.5e-63 245.7 216 59.7
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 3.2e-63 245.4 201 65.2
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 4.2e-63 245.0 216 60.6
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 5.5e-63 244.6 216 59.3
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 9.3e-63 243.8 216 60.2
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 1.6e-62 243.0 216 60.6
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 7.9e-62 240.7 216 57.9
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 2.3e-61 239.2 259 53.7
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 5.1e-61 238.0 200 63.5
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 1.9e-60 236.1 175 69.1
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 7.4e-60 234.2 216 59.3
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 2.2e-59 232.6 216 55.6
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 4.8e-59 231.5 217 58.5
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.1e-58 230.3 200 62.0
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.4e-58 229.9 209 59.3
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 1.4e-58 229.9 252 52.4
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 1.8e-58 229.6 215 58.6
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 4.1e-58 228.4 215 56.7
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 1.2e-57 226.9 216 56.5
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 3.4e-57 225.3 216 54.6
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.0e-56 223.8 197 60.9
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 1.0e-56 223.8 181 66.3
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 1.3e-56 223.4 159 71.7
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 2.1e-54 216.1 216 54.2
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 3.6e-54 215.3 250 51.2
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 7.9e-54 214.2 214 52.3
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 2.0e-49 199.5 174 60.3
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.4e-47 193.4 216 53.7
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 1.2e-46 190.3 216 52.8
CDE02G0645 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 2.1e-46 189.5 144 66.7
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 6.1e-46 188.0 173 59.0
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.3e-45 186.0 215 50.2
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 2.6e-44 182.6 173 56.1
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 1.2e-41 173.7 183 53.0
HPP92_010239 Vanilla planifolia HOM05D000626 ORTHO05D003868 1.4e-34 150.2 143 55.9
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 5.9e-33 144.8 217 35.5
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.3e-32 143.7 130 61.5
Thecc.08G195700 Theobroma cacao HOM05D000626 ORTHO05D003868 6.3e-27 124.8 98 63.3
BraA02t09362Z Brassica rapa HOM05D000626 ORTHO05D003868 5.7e-20 101.7 69 65.2
BcaC03g18407 Brassica carinata HOM05D000626 ORTHO05D003868 1.7e-19 100.1 116 49.1
FvH4_4g13600 Fragaria vesca HOM05D000626 ORTHO05D003868 3.7e-19 99.0 55 78.2
FvH4_6g12900 Fragaria vesca HOM05D000626 ORTHO05D003868 3.7e-19 99.0 55 78.2
CAN.G529.47 Capsicum annuum HOM05D000043 ORTHO05D000600 1.4e-18 97.1 77 64.9
FAN09G2415 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.8e-18 96.7 55 76.4
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 1.0e-16 90.9 92 56.5
CAN.G204.14 Capsicum annuum HOM05D000626 ORTHO05D015997 2.9e-16 89.4 54 74.1
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 6.6e-16 88.2 71 63.4
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 1.8e-13 80.1 59 66.1
TWI15G0235 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 3.0e-13 79.3 51 64.7
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.6e-12 76.3 65 66.2
Gohir.A07G207250 Gossypium hirsutum HOM05D000626 ORTHO05D003868 5.7e-12 75.1 85 49.4
A02p44450 Brassica napus HOM05D000626 ORTHO05D003868 1.1e-10 70.9 80 48.8
CiPaw.16G057500 Carya illinoinensis HOM05D000626 ORTHO05D003868 2.4e-10 69.7 90 46.7
FAN04G0450 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.2e-10 69.3 55 60.0
FAN01G2722 Fragaria x ananassa HOM05D000626 ORTHO05D003868 2.7e-09 66.2 48 66.7
Potri.004G151050 Populus trichocarpa HOM05D000626 ORTHO05D003868 5.9e-09 65.1 107 42.1
arahy.Tifrunner.gnm1.ann1.61JD7D Arachis hypogaea HOM05D000626 ORTHO05D003868 3.3e-07 59.3 34 79.4
arahy.Tifrunner.gnm1.ann1.FT0TL2 Arachis hypogaea HOM05D000626 ORTHO05D003868 3.3e-07 59.3 33 81.8
arahy.Tifrunner.gnm1.ann1.ZIS5WG Arachis hypogaea HOM05D000626 ORTHO05D003868 7.3e-07 58.2 33 78.8
arahy.Tifrunner.gnm1.ann1.4Z2V5Y Arachis hypogaea HOM05D000626 ORTHO05D003868 9.5e-07 57.8 33 78.8
arahy.Tifrunner.gnm1.ann1.9EQ5HC Arachis hypogaea HOM05D000626 ORTHO05D003868 9.5e-07 57.8 33 78.8
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 4.7e-06 55.5 40 72.5


User provided reference genes

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