Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0022136g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.3e-43 178.3 81 100.0
Nitab4.5_0000012g0210 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.7e-30 135.6 75 85.3
Nitab4.5_0002542g0010 Nicotiana tabacum HOM05D001426 ORTHO05D006296 1.0e-14 83.2 80 52.5
Nitab4.5_0000186g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.0e-14 80.9 57 66.7
Nitab4.5_0000282g0100 Nicotiana tabacum HOM05D001454 ORTHO05D006296 5.0e-14 80.9 58 58.6
Nitab4.5_0003985g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-14 80.1 56 64.3
Nitab4.5_0000002g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-13 79.3 44 81.8
Nitab4.5_0000597g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-13 79.3 52 69.2
Nitab4.5_0000190g0230 Nicotiana tabacum HOM05D001454 ORTHO05D001389 3.3e-13 78.2 58 56.9
Nitab4.5_0000311g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.3e-13 78.2 53 62.3
Nitab4.5_0001601g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.3e-13 77.8 58 65.5
Nitab4.5_0000340g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.3e-13 77.0 60 61.7
Nitab4.5_0005614g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.3e-13 77.0 58 56.9
Nitab4.5_0002854g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.5e-13 76.6 52 67.3
Nitab4.5_0000070g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-12 76.3 57 63.2
Nitab4.5_0003667g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-12 76.3 58 56.9
Nitab4.5_0000717g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.6e-12 75.9 50 64.0
Nitab4.5_0000173g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.8e-12 75.1 58 56.9
Nitab4.5_0001116g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.8e-12 75.1 58 56.9
Nitab4.5_0000304g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.7e-12 74.3 52 63.5
Nitab4.5_0003814g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.7e-12 74.3 58 56.9
Nitab4.5_0001130g0250 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.1e-12 73.6 57 56.1
Nitab4.5_0001705g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.1e-12 73.6 54 63.0
Nitab4.5_0000444g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-11 73.2 49 61.2
Nitab4.5_0003679g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-11 73.2 57 52.6
Nitab4.5_0000031g0430 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-11 72.8 50 62.0
Nitab4.5_0000458g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-11 72.8 57 59.6
Nitab4.5_0001749g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.1e-11 71.6 57 52.6
Peaxi162Scf01096g00313 Petunia axillaris HOM05D001426 ORTHO05D001389 4.0e-11 71.2 57 57.9
Nitab4.5_0000163g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.8e-11 70.5 49 53.1
Nitab4.5_0008537g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.8e-11 70.5 58 53.4
Nitab4.5_0000409g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.9e-11 70.1 57 57.9
Nitab4.5_0001722g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.9e-11 70.1 39 71.8
Nitab4.5_0004066g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.9e-11 70.1 57 61.4
Nitab4.5_0000029g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-10 69.7 55 58.2
Nitab4.5_0000163g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-10 69.7 66 51.5
Nitab4.5_0000200g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-10 69.7 58 55.2
Nitab4.5_0000350g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-10 69.3 55 58.2
Nitab4.5_0001257g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-10 69.3 58 51.7
Nitab4.5_0002470g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-10 69.3 57 50.9
Nitab4.5_0001351g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.0e-10 68.9 58 56.9
Nitab4.5_0001471g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.0e-10 68.9 57 52.6
Peaxi162Scf00422g00071 Petunia axillaris HOM05D001426 ORTHO05D001389 2.0e-10 68.9 48 60.4
Peaxi162Scf02408g00006 Petunia axillaris HOM05D001426 ORTHO05D001389 2.6e-10 68.6 49 61.2
Peaxi162Scf53938g00004 Petunia axillaris HOM05D001426 ORTHO05D001389 2.6e-10 68.6 49 61.2
Nitab4.5_0000001g0460 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.4e-10 68.2 39 79.5
Nitab4.5_0000168g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.4e-10 68.2 54 57.4
Nitab4.5_0004348g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.4e-10 67.8 57 56.1
Nitab4.5_0000743g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.5e-10 67.0 40 70.0
Nitab4.5_0000211g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.9e-10 66.6 54 55.6
PGSC0003DMG400003458 Solanum tuberosum HOM05D001426 ORTHO05D001389 9.9e-10 66.6 49 57.1
Nitab4.5_0004145g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.2e-09 65.5 53 60.4
Peaxi162Scf01062g00023 Petunia axillaris HOM05D001426 ORTHO05D001389 2.2e-09 65.5 57 54.4
Nitab4.5_0000011g0240 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.9e-09 65.1 53 50.9
Nitab4.5_0000025g0570 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.9e-09 65.1 56 55.4
Nitab4.5_0001529g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.7e-09 64.7 69 53.6
Peaxi162Scf00348g00032 Petunia axillaris HOM05D001426 ORTHO05D001389 3.7e-09 64.7 59 54.2
Nitab4.5_0004145g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.4e-09 63.9 45 57.8
Peaxi162Scf00358g01210 Petunia axillaris HOM05D001426 ORTHO05D001389 8.3e-09 63.5 53 54.7
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 8.3e-09 63.5 49 57.1
Nitab4.5_0009504g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-08 63.2 51 56.9
Peaxi162Scf00321g00071 Petunia axillaris HOM05D001426 ORTHO05D001389 1.1e-08 63.2 57 52.6
Peaxi162Scf00789g00528 Petunia axillaris HOM05D001426 ORTHO05D001389 1.1e-08 63.2 49 57.1
Nitab4.5_0000153g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-08 62.8 44 56.8
Nitab4.5_0000201g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-08 62.8 39 64.1
Nitab4.5_0000356g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-08 62.8 55 52.7
Peaxi162Scf00042g00112 Petunia axillaris HOM05D001426 ORTHO05D001389 1.4e-08 62.8 49 59.2
Peaxi162Scf00252g00812 Petunia axillaris HOM05D001426 ORTHO05D001389 1.4e-08 62.8 60 51.7
Peaxi162Scf00537g00028 Petunia axillaris HOM05D001426 ORTHO05D001389 1.4e-08 62.8 46 54.3
Peaxi162Scf00210g00097 Petunia axillaris HOM05D001426 ORTHO05D001389 1.9e-08 62.4 37 73.0
Nitab4.5_0000075g0130 Nicotiana tabacum HOM05D001454 ORTHO05D001389 2.4e-08 62.0 65 47.7
Nitab4.5_0000464g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.4e-08 62.0 45 60.0
Sopen08g008140 Solanum pennellii HOM05D001426 ORTHO05D003926 2.4e-08 62.0 57 49.1
Nitab4.5_0000904g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.2e-08 61.6 39 64.1
Peaxi162Scf00075g00204 Petunia axillaris HOM05D001426 ORTHO05D001389 3.2e-08 61.6 49 57.1
Peaxi162Scf00257g00218 Petunia axillaris HOM05D001426 ORTHO05D001389 3.2e-08 61.6 49 55.1
PGSC0003DMG400021457 Solanum tuberosum HOM05D001426 ORTHO05D001389 3.2e-08 61.6 48 56.2
CAN.G229.11 Capsicum annuum HOM05D001426 ORTHO05D001389 4.1e-08 61.2 48 52.1
Nitab4.5_0001170g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.1e-08 61.2 38 65.8
Nitab4.5_0000007g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.4e-08 60.8 52 53.8
Nitab4.5_0000201g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.4e-08 60.8 35 68.6
Nitab4.5_0000679g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.4e-08 60.8 50 54.0
Nitab4.5_0000869g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.4e-08 60.8 39 61.5
Nitab4.5_0000657g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.1e-08 60.5 58 51.7
PGSC0003DMG400042289 Solanum tuberosum HOM05D001426 ORTHO05D001389 7.1e-08 60.5 53 56.6
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 7.1e-08 60.5 57 47.4
Nitab4.5_0000033g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-07 59.7 55 50.9
Nitab4.5_0000046g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-07 59.7 53 50.9
Nitab4.5_0000356g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-07 59.7 41 61.0
Peaxi162Scf00013g00232 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-07 59.7 49 55.1
Peaxi162Scf00249g00043 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-07 59.7 49 55.1
PGSC0003DMG400046426 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.2e-07 59.7 57 50.9
MBI19_g13331_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-07 59.3 66 42.4
Peaxi162Scf00327g00054 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-07 59.3 37 70.3
Peaxi162Scf00388g00106 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-07 59.3 49 55.1
Nitab4.5_0000051g0370 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-07 58.9 40 65.0
Nitab4.5_0000154g0020 Nicotiana tabacum HOM05D001454 ORTHO05D006296 2.1e-07 58.9 49 53.1
Peaxi162Scf00055g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 2.1e-07 58.9 39 66.7
Peaxi162Scf00882g00015 Petunia axillaris HOM05D001426 ORTHO05D001389 2.1e-07 58.9 49 53.1
PGSC0003DMG400014002 Solanum tuberosum HOM05D000003 ORTHO05D001389 2.1e-07 58.9 38 57.9
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.1e-07 58.9 49 51.0
Nitab4.5_0000180g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-07 58.5 47 57.4
Nitab4.5_0000740g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-07 58.5 40 62.5
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-07 58.5 45 55.6
Peaxi162Scf00004g00091 Petunia axillaris HOM05D001426 ORTHO05D001389 2.7e-07 58.5 46 52.2
Nitab4.5_0000800g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.5e-07 58.2 63 52.4
Peaxi162Scf00593g00326 Petunia axillaris HOM05D001426 ORTHO05D001389 3.5e-07 58.2 48 52.1
PGSC0003DMG400044616 Solanum tuberosum HOM05D001426 ORTHO05D001389 3.5e-07 58.2 36 69.4
Nitab4.5_0000088g0140 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.6e-07 57.8 40 62.5
Peaxi162Scf00872g00111 Petunia axillaris HOM05D001426 ORTHO05D001389 4.6e-07 57.8 37 70.3
Peaxi162Scf00172g00144 Petunia axillaris HOM05D001426 ORTHO05D001389 6.0e-07 57.4 49 57.1
Peaxi162Scf00632g00037 Petunia axillaris HOM05D001426 ORTHO05D001389 6.0e-07 57.4 39 64.1
Nitab4.5_0000049g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.8e-07 57.0 67 49.3
CAN.G82.17 Capsicum annuum HOM05D002670 ORTHO05D003079 1.0e-06 56.6 50 50.0
Nitab4.5_0000268g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-06 56.6 39 61.5
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 1.0e-06 56.6 57 45.6
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.0e-06 56.6 57 45.6
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.0e-06 56.6 54 42.6
PGSC0003DMG400033674 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.0e-06 56.6 53 50.9
Nitab4.5_0000042g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.3e-06 56.2 34 67.6
Peaxi162Scf00829g00051 Petunia axillaris HOM05D001426 ORTHO05D001389 1.3e-06 56.2 47 51.1
PGSC0003DMG400016975 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.3e-06 56.2 57 47.4
Nitab4.5_0000186g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.7e-06 55.8 36 66.7
Nitab4.5_0001596g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.7e-06 55.8 36 63.9
Peaxi162Scf00072g00412 Petunia axillaris HOM05D001426 ORTHO05D001389 1.7e-06 55.8 39 59.0
CAN.G688.6 Capsicum annuum HOM05D001426 ORTHO05D001389 2.3e-06 55.5 50 46.0
Nitab4.5_0000324g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.3e-06 55.5 50 52.0
Nitab4.5_0012527g0020 Nicotiana tabacum HOM05D001995 ORTHO05D000022 2.3e-06 55.5 58 44.8
PGSC0003DMG400037148 Solanum tuberosum HOM05D001426 ORTHO05D001389 2.3e-06 55.5 58 43.1
Nitab4.5_0008049g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.0e-06 55.1 45 53.3
Peaxi162Scf00199g00062 Petunia axillaris HOM05D001426 ORTHO05D001389 3.0e-06 55.1 57 50.9
CAN.G878.4 Capsicum annuum HOM05D001426 ORTHO05D001389 3.9e-06 54.7 53 43.4
Nitab4.5_0001903g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.9e-06 54.7 45 53.3
Nitab4.5_0000094g0180 Nicotiana tabacum HOM05D001454 ORTHO05D000007 5.1e-06 54.3 50 56.0
Nitab4.5_0000545g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.1e-06 54.3 38 68.4
PGSC0003DMG400029968 Solanum tuberosum HOM05D001426 ORTHO05D001389 5.1e-06 54.3 53 47.2
Nitab4.5_0001206g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.6e-06 53.9 35 68.6
Peaxi162Scf00826g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 6.6e-06 53.9 46 52.2
Nitab4.5_0000067g0220 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-06 53.5 41 56.1
Nitab4.5_0000247g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-06 53.5 57 43.9
Nitab4.5_0001771g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-06 53.5 34 64.7
Nitab4.5_0003865g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-06 53.5 58 48.3


User provided reference genes

Program Settings