Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.8e-173 612.5 304 100.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 7.1e-170 600.5 300 99.3
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.4e-162 576.2 300 95.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.2e-162 575.1 300 95.3
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.2e-162 575.1 300 95.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 6.2e-158 560.8 300 87.3
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.4e-156 555.1 300 87.7
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 4.5e-156 554.7 297 86.5
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 7.6e-156 553.9 300 85.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 2.2e-155 552.4 300 85.7
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 3.8e-155 551.6 302 89.1
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.5e-155 550.8 300 86.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.5e-155 550.8 300 86.0
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 8.4e-155 550.4 303 83.5
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.1e-154 550.1 300 85.3
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.4e-154 549.7 295 87.1
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.4e-154 549.7 301 84.1
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 4.2e-154 548.1 297 85.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 5.5e-154 547.7 299 84.6
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 9.3e-154 547.0 302 83.4
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.2e-153 546.6 301 84.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-153 546.2 295 85.1
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.1e-153 545.8 300 85.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.7e-153 545.4 299 84.3
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.7e-153 545.4 300 83.7
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.5e-153 545.0 297 84.5
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.5e-153 545.0 297 84.5
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 4.6e-153 544.7 297 84.2
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.6e-153 544.7 299 83.3
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 7.9e-153 543.9 295 85.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 7.9e-153 543.9 297 84.2
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 7.9e-153 543.9 300 84.0
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.9e-153 543.9 297 85.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-152 542.3 295 84.4
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 3.0e-152 542.0 295 84.4
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 3.0e-152 542.0 302 82.8
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.1e-152 541.2 295 84.4
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 6.7e-152 540.8 297 84.2
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.7e-152 540.8 300 83.3
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 8.7e-152 540.4 300 82.3
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-151 539.3 295 84.4
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 2.5e-151 538.9 300 83.7
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.5e-151 538.9 300 82.0
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.5e-151 538.9 297 83.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.5e-151 538.9 297 83.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 3.3e-151 538.5 301 81.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 4.3e-151 538.1 297 83.2
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 5.7e-151 537.7 297 83.5
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 5.7e-151 537.7 297 83.5
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.6e-150 536.2 301 81.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.6e-150 536.2 300 83.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.2e-150 535.8 297 82.5
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.2e-150 535.8 300 85.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.8e-150 535.4 295 84.4
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-150 535.4 295 84.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-150 535.4 295 84.4
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-150 535.4 295 84.4
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.8e-150 535.4 296 84.1
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 4.8e-150 534.6 295 86.4
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 6.3e-150 534.3 300 83.7
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 8.2e-150 533.9 297 83.5
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-149 533.5 301 81.4
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.4e-149 533.1 300 81.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.4e-149 532.3 296 83.1
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 9.0e-149 530.4 301 80.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 9.0e-149 530.4 295 82.7
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 9.0e-149 530.4 301 81.1
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.0e-148 529.3 300 81.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 4.5e-148 528.1 304 82.2
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.0e-147 526.9 297 81.1
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.0e-147 526.9 304 82.2
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.0e-147 526.9 300 88.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.3e-147 526.6 300 80.3
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.2e-147 525.8 304 80.3
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.2e-147 525.8 304 80.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 3.8e-147 525.0 304 81.6
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.8e-147 525.0 295 83.4
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 5.0e-147 524.6 300 84.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 8.5e-147 523.9 304 81.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 8.5e-147 523.9 304 83.6
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.4e-146 523.1 297 81.8
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.9e-146 522.7 304 81.6
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.5e-146 521.2 302 80.8
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 7.2e-146 520.8 296 82.4
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.2e-145 520.0 298 80.9
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.6e-145 519.6 303 79.2
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.6e-145 519.6 295 80.3
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 7.9e-145 517.3 303 78.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.3e-144 515.8 300 81.0
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 6.7e-144 514.2 331 76.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.3e-142 510.0 301 78.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.7e-142 508.4 301 79.4
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.0e-139 500.4 300 82.7
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 3.8e-139 498.4 294 77.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 2.1e-137 492.7 294 76.5
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.1e-136 488.0 294 81.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.1e-135 486.9 302 74.8
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 3.1e-133 478.8 277 78.7
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.9e-128 461.8 251 84.5
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 7.4e-127 457.6 300 73.7
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.8e-125 453.0 294 72.8
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.0e-123 447.2 320 65.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.7e-123 446.4 293 70.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-120 436.4 289 66.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.2e-120 434.9 294 70.1
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.2e-119 433.7 289 66.4
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.4e-119 431.8 293 68.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.7e-118 429.9 292 68.5
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 7.2e-106 387.9 294 62.6
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 6.8e-104 381.3 225 76.4
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.9e-98 363.2 300 60.0
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 5.4e-69 265.4 307 42.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 7.6e-63 245.0 310 41.0
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-61 241.1 126 88.9
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.3e-51 207.6 163 60.7
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-43 180.3 110 77.3
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-43 180.3 110 77.3
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.1e-43 179.1 110 76.4
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 8.2e-41 171.8 101 81.2
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.0e-07 60.8 40 70.0


User provided reference genes

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