Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0021884g0010 Nicotiana tabacum HOM05D000088 ORTHO05D000933 6.4e-60 233.8 111 100.0
Nitab4.5_0007754g0020 Nicotiana tabacum HOM05D000088 ORTHO05D000933 9.2e-59 229.9 111 97.3
PGSC0003DMG402000796 Solanum tuberosum HOM05D000088 ORTHO05D000933 1.5e-45 186.0 133 69.9
Peaxi162Scf00263g01424 Petunia axillaris HOM05D000088 ORTHO05D000933 2.1e-42 175.6 137 66.4
Solyc04g071120.3 Solanum lycopersicum HOM05D000088 ORTHO05D000933 6.6e-41 170.6 133 63.9
Dinv25847 Davidia involucrata HOM05D000088 ORTHO05D000933 8.4e-28 127.1 133 52.6
Cc10_g14540 Coffea canephora HOM05D000088 ORTHO05D000933 2.4e-27 125.6 132 51.5
GSVIVG01001690001 Vitis vinifera HOM05D000088 ORTHO05D000933 3.2e-27 125.2 133 51.1
Actinidia15144 Actinidia chinensis HOM05D000088 ORTHO05D000933 9.3e-27 123.6 104 63.5
Ciclev10003619m.g Citrus clementina HOM05D000088 ORTHO05D000933 3.5e-26 121.7 133 49.6
CSS0020576 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D000933 6.0e-26 120.9 133 51.9
Dinv41098 Davidia involucrata HOM05D000088 ORTHO05D000933 1.0e-25 120.2 108 59.3
Duzib116G0258 Durio zibethinus HOM05D000088 ORTHO05D000933 8.7e-25 117.1 115 52.2
Atru.chr13.2185 Acer truncatum HOM05D000088 ORTHO05D000933 1.9e-24 115.9 131 48.1
Potri.002G070000 Populus trichocarpa HOM05D000088 ORTHO05D000933 2.5e-24 115.5 134 46.3
HanXRQChr05g0161591 Helianthus annuus HOM05D000088 ORTHO05D000933 3.3e-24 115.2 131 49.6
QL02p024266 Quercus lobata HOM05D000088 ORTHO05D000933 5.6e-24 114.4 133 46.6
Manes.18G090300 Manihot esculenta HOM05D000088 ORTHO05D000933 9.6e-24 113.6 130 46.2
Sc02g0004240 Simmondsia chinensis HOM05D000088 ORTHO05D000933 9.6e-24 113.6 132 44.7
Thecc.08G148800 Theobroma cacao HOM05D000088 ORTHO05D000933 2.1e-23 112.5 124 48.4
Potri.005G190200 Populus trichocarpa HOM05D000088 ORTHO05D000933 4.8e-23 111.3 130 46.2
Hund26710 Selenicereus undatus HOM05D000088 ORTHO05D000933 6.2e-23 110.9 135 44.4
CiPaw.15G017400 Carya illinoinensis HOM05D000088 ORTHO05D000933 1.4e-22 109.8 135 45.9
Gohir.A02G064900 Gossypium hirsutum HOM05D000088 ORTHO05D000933 1.8e-22 109.4 122 47.5
Gohir.D02G070800 Gossypium hirsutum HOM05D000088 ORTHO05D000933 1.8e-22 109.4 122 47.5
Gorai.005G080000 Gossypium raimondii HOM05D000088 ORTHO05D000933 1.8e-22 109.4 122 47.5
Medtr1g099110 Medicago truncatula HOM05D000088 ORTHO05D000933 3.1e-22 108.6 133 47.4
Cfa018336 Carpinus fangiana HOM05D000088 ORTHO05D000933 5.3e-22 107.8 133 45.1
CANSAT25G1525 Cannabis sativa HOM05D000088 ORTHO05D000933 6.9e-22 107.5 133 47.4
Oeu025467.2 Olea europaea HOM05D000088 ORTHO05D000933 6.9e-22 107.5 134 45.5
Gohir.D05G244000 Gossypium hirsutum HOM05D000088 ORTHO05D000933 9.0e-22 107.1 133 45.1
Lj7C370G6 Lonicera japonica HOM05D000088 ORTHO05D000933 1.2e-21 106.7 124 50.0
Gorai.009G253200 Gossypium raimondii HOM05D000088 ORTHO05D000933 1.5e-21 106.3 133 45.1
TWI32G0716 Tripterygium wilfordii HOM05D000088 ORTHO05D000933 2.0e-21 105.9 134 45.5
TAR625G0526 Trochodendron aralioides HOM05D000088 ORTHO05D000933 2.0e-21 105.9 134 45.5
Oeu009855.2 Olea europaea HOM05D000088 ORTHO05D000933 2.6e-21 105.5 135 45.2
TAR625G0608 Trochodendron aralioides HOM05D000088 ORTHO05D000933 3.4e-21 105.1 134 46.3
ECA246G5224 Erigeron canadensis HOM05D000088 ORTHO05D000933 7.6e-21 104.0 126 45.2
Phvul.007G078800 Phaseolus vulgaris HOM05D000088 ORTHO05D000933 7.6e-21 104.0 113 49.6
Ca_19930_v3 Cicer arietinum L. HOM05D000088 ORTHO05D000933 1.0e-20 103.6 113 50.4
MD05G1021200 Malus domestica HOM05D000088 ORTHO05D000933 1.0e-20 103.6 134 47.0
Cpa.g.c40034 Carica papaya HOM05D000088 ORTHO05D000933 1.7e-20 102.8 101 53.5
RcHm_v2.0_Chr6g0276351 Rosa chinensis HOM05D000088 ORTHO05D000933 1.7e-20 102.8 123 47.2
TPR.G10149 Trifolium pratense HOM05D000088 ORTHO05D000933 2.2e-20 102.4 134 43.3
Migut.C01011 Erythranthe guttata HOM05D000088 ORTHO05D000933 2.9e-20 102.1 132 44.7
Lsat_1_v5_gn_6_97980 Lactuca sativa HOM05D000088 ORTHO05D000933 2.9e-20 102.1 109 51.4
Glyma.10G226300 Glycine max HOM05D000088 ORTHO05D000933 3.8e-20 101.7 113 48.7
Glyma.20G165833 Glycine max HOM05D000088 ORTHO05D000933 3.8e-20 101.7 113 48.7
Lsat_1_v5_gn_1_8480 Lactuca sativa HOM05D000088 ORTHO05D000933 3.8e-20 101.7 108 52.8
Ah.05g167770 Amaranthus hybridus HOM05D000088 ORTHO05D000933 4.9e-20 101.3 114 50.0
Nn1g06122 Nelumbo nucifera HOM05D000088 ORTHO05D000933 4.9e-20 101.3 111 50.5
Hma1.2p1_0616F.1_g190020 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 8.4e-20 100.5 101 55.4
MD10G1021900 Malus domestica HOM05D000088 ORTHO05D000933 8.4e-20 100.5 109 51.4
Sabra05G0145400 Salix brachista HOM05D000088 ORTHO05D000933 8.4e-20 100.5 120 45.8
VMungo0720G2772 Vigna mungo HOM05D000088 ORTHO05D000933 8.4e-20 100.5 113 46.9
Lj5g0023572 Lotus japonicus HOM05D000088 ORTHO05D000933 1.1e-19 100.1 121 45.5
EL10Ac1g01514 Beta vulgaris HOM05D000088 ORTHO05D000933 1.9e-19 99.4 106 51.9
AUR62026735 Chenopodium quinoa HOM05D000088 ORTHO05D000933 4.2e-19 98.2 108 49.1
AUR62013547 Chenopodium quinoa HOM05D000088 ORTHO05D000933 5.5e-19 97.8 108 49.1
Psat6g193880 Pisum sativum HOM05D000088 ORTHO05D000933 7.1e-19 97.4 132 42.4
MELO3C008367.2 Cucumis melo HOM05D000088 ORTHO05D000933 1.2e-18 96.7 120 48.3
FAN15G3602 Fragaria x ananassa HOM05D000088 ORTHO05D000933 1.2e-18 96.7 116 48.3
FAN20G1068 Fragaria x ananassa HOM05D000088 ORTHO05D000933 1.6e-18 96.3 133 45.9
FAN27G3248 Fragaria x ananassa HOM05D000088 ORTHO05D000933 1.6e-18 96.3 133 45.9
FvH4_2g14210 Fragaria vesca HOM05D000088 ORTHO05D000933 2.7e-18 95.5 133 45.1
FAN24G2676 Fragaria x ananassa HOM05D000088 ORTHO05D000933 2.7e-18 95.5 133 45.1
ClCG08G006880 Citrullus lanatus HOM05D000088 ORTHO05D000933 3.5e-18 95.1 101 48.5
arahy.Tifrunner.gnm1.ann1.E56BAP Arachis hypogaea HOM05D000088 ORTHO05D000933 7.9e-18 94.0 111 45.9
HanXRQChr02g0039911 Helianthus annuus HOM05D000088 ORTHO05D000933 7.9e-18 94.0 115 43.5
SGA_v2.0_scaffold48G17979 Striga asiatica HOM05D000088 ORTHO05D000933 7.9e-18 94.0 123 43.1
Aqoxy6G00377 Aquilegia oxysepala HOM05D000088 ORTHO05D000933 1.3e-17 93.2 120 41.7
Lalb_Chr19g0130331 Lupinus albus HOM05D000088 ORTHO05D000933 1.8e-17 92.8 109 45.9
CDE06G0109 Ceratophyllum demersum HOM05D000088 ORTHO05D000933 2.3e-17 92.4 119 47.9
Hma1.2p1_0206F.1_g087575 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 5.1e-17 91.3 101 51.5
Hma1.2p1_0206F.1_g087590 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 5.1e-17 91.3 101 51.5
PGR044G2249 Punica granatum HOM05D000088 ORTHO05D000933 5.1e-17 91.3 132 43.2
Eucgr.F02717 Eucalyptus grandis HOM05D000088 ORTHO05D000933 1.1e-16 90.1 109 45.9
Sed0017539 Sechium edule HOM05D000088 ORTHO05D000933 1.1e-16 90.1 115 43.5
Nn5g28701 Nelumbo nucifera HOM05D000088 ORTHO05D000933 1.5e-16 89.7 111 44.1
arahy.Tifrunner.gnm1.ann1.ZZUQ03 Arachis hypogaea HOM05D000088 ORTHO05D000933 9.7e-16 87.0 101 46.5
Haze_17739 Corylus avellana HOM05D000088 ORTHO05D000933 3.7e-15 85.1 63 66.7
CDE08G0694 Ceratophyllum demersum HOM05D000088 ORTHO05D000933 8.2e-15 84.0 119 43.7
CiPaw.16G014400 Carya illinoinensis HOM05D000088 ORTHO05D000933 2.4e-14 82.4 102 43.1
PSO541G6008 Papaver somniferum HOM05D000088 ORTHO05D000933 4.1e-14 81.6 113 44.2
HPP92_027442 Vanilla planifolia HOM05D000088 ORTHO05D000933 4.1e-14 81.6 136 41.2
PSO675G3776 Papaver somniferum HOM05D000088 ORTHO05D000933 5.3e-14 81.3 116 43.1
DCAR_001129 Daucus carota HOM05D000088 ORTHO05D000933 9.0e-14 80.5 111 45.0
Gohir.A05G242600 Gossypium hirsutum HOM05D000088 ORTHO05D000933 5.9e-13 77.8 136 39.0
ATR0772G201 Amborella trichopoda HOM05D000088 ORTHO05D000933 3.2e-11 72.0 114 39.5
Aa31LG4G6960 Aethionema arabicum HOM05D000088 ORTHO05D000933 3.1e-06 55.5 99 33.3


User provided reference genes

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