Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0020955g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 4.9e-89 331.3 186 100.0
CAN.G484.19 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-23 113.2 153 48.4
Nitab4.5_0004389g0080 Nicotiana tabacum HOM05D000053 ORTHO05D000035 7.0e-19 98.2 241 34.9
PGSC0003DMG401002869 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.2e-18 97.4 188 39.4
CAN.G484.17 Capsicum annuum HOM05D000053 ORTHO05D000035 2.0e-18 96.7 166 42.2
Solyc12g100010.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.7e-18 96.3 175 39.4
Nitab4.5_0008247g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 2.9e-17 92.8 145 45.5
CAN.G575.9 Capsicum annuum HOM05D000053 ORTHO05D000035 2.5e-16 89.7 180 39.4
CAN.G1002.25 Capsicum annuum HOM05D000053 ORTHO05D000035 5.6e-16 88.6 135 45.9
CAN.G575.7 Capsicum annuum HOM05D000053 ORTHO05D000035 5.6e-16 88.6 140 43.6
PGSC0003DMG400017968 Solanum tuberosum HOM05D000053 ORTHO05D000035 1.6e-15 87.0 66 69.7
PGSC0003DMG400023867 Solanum tuberosum HOM05D000053 ORTHO05D000035 5.2e-14 82.0 66 66.7
CAN.G1002.21 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-13 80.9 110 47.3
Nitab4.5_0000551g0180 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-13 80.9 57 75.4
CAN.G484.10 Capsicum annuum HOM05D000053 ORTHO05D000035 4.4e-13 79.0 178 38.2
PGSC0003DMG400005539 Solanum tuberosum HOM05D000053 ORTHO05D000035 7.5e-13 78.2 66 65.2
PGSC0003DMG400005538 Solanum tuberosum HOM05D000053 ORTHO05D000035 9.8e-13 77.8 66 65.2
CAN.G107.25 Capsicum annuum HOM05D000053 ORTHO05D000035 2.2e-12 76.6 123 44.7
TWI38G1191 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 2.9e-12 76.3 111 44.1
Nitab4.5_0009084g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 4.1e-11 72.4 137 38.0
CAN.G825.35 Capsicum annuum HOM05D000053 ORTHO05D000035 1.2e-10 70.9 160 39.4
Nitab4.5_0002757g0100 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.6e-10 70.5 150 35.3
TWI73G0933 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 2.0e-10 70.1 234 29.1
Peaxi162Scf00349g00712 Petunia axillaris HOM05D000053 ORTHO05D000035 2.7e-10 69.7 256 28.1
Solyc12g040740.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.7e-10 69.7 52 65.4
PGSC0003DMG400004284 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.5e-10 69.3 200 31.0
Peaxi162Scf00299g00016 Petunia axillaris HOM05D000053 ORTHO05D000035 4.6e-10 68.9 172 39.0
CAN.G158.29 Capsicum annuum HOM05D000053 ORTHO05D000001 7.8e-10 68.2 155 34.2
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 1.0e-09 67.8 196 31.1
Sopen03g006300 Solanum pennellii HOM05D000053 ORTHO05D000035 1.3e-09 67.4 197 31.5
Medtr7g009470 Medicago truncatula HOM05D000053 ORTHO05D000035 3.0e-09 66.2 166 34.9
TWI38G0397 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 3.9e-09 65.9 152 36.8
QL07p034964 Quercus lobata HOM05D000053 ORTHO05D000448 6.6e-09 65.1 154 33.8
COL.COLO4_25516 Corchorus olitorius HOM05D000053 ORTHO05D000035 1.1e-08 64.3 104 35.6
TWI34G1516 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 1.1e-08 64.3 94 44.7
HanXRQChr07g0207271 Helianthus annuus HOM05D000071 ORTHO05D000029 1.9e-08 63.5 165 33.3
Cc11_g00880 Coffea canephora HOM05D000053 ORTHO05D000035 2.5e-08 63.2 197 28.4
Duzib093G2016 Durio zibethinus HOM05D000053 ORTHO05D000448 3.3e-08 62.8 190 30.5
Solyc03g082780.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 3.3e-08 62.8 234 32.9
PGSC0003DMG400003195 Solanum tuberosum HOM05D000053 ORTHO05D000035 4.3e-08 62.4 84 42.9
Duzib138G0611 Durio zibethinus HOM05D000053 ORTHO05D000035 5.6e-08 62.0 144 31.2
Gohir.D05G380100 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.6e-08 62.0 183 30.6
ClCG06G000930 Citrullus lanatus HOM05D000053 ORTHO05D000035 7.3e-08 61.6 161 34.2
Ciclev10024171m.g Citrus clementina HOM05D000053 ORTHO05D000035 1.2e-07 60.8 157 33.8
Ciclev10027416m.g Citrus clementina HOM05D000053 ORTHO05D000448 1.2e-07 60.8 111 42.3
Duzib138G0688 Durio zibethinus HOM05D000053 ORTHO05D000035 1.2e-07 60.8 169 30.2
Nitab4.5_0006164g0060 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.2e-07 60.8 51 62.7
HanXRQChr07g0205181 Helianthus annuus HOM05D000071 ORTHO05D000029 1.6e-07 60.5 165 32.7
HanXRQChr14g0426821 Helianthus annuus HOM05D000071 ORTHO05D000029 1.6e-07 60.5 162 29.0
HanXRQChr14g0426831 Helianthus annuus HOM05D000071 ORTHO05D000029 1.6e-07 60.5 162 29.0
Sopen01g003920 Solanum pennellii HOM05D000053 ORTHO05D000035 1.6e-07 60.5 170 31.8
CAN.G575.10 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-07 60.1 204 30.9
Ciclev10023754m.g Citrus clementina HOM05D000053 ORTHO05D000035 2.1e-07 60.1 118 35.6
Duzib089G0001 Durio zibethinus HOM05D000053 ORTHO05D000035 2.8e-07 59.7 183 30.6
HanXRQChr07g0204681 Helianthus annuus HOM05D000071 ORTHO05D000029 2.8e-07 59.7 163 31.9
HanXRQChr14g0461071 Helianthus annuus HOM05D000071 ORTHO05D000029 2.8e-07 59.7 107 37.4
Lj5C653T5 Lonicera japonica HOM05D000053 ORTHO05D000448 2.8e-07 59.7 129 34.9
Solyc01g005870.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 2.8e-07 59.7 175 30.9
Sopen12g004520 Solanum pennellii HOM05D000053 ORTHO05D000035 2.8e-07 59.7 157 30.6
TWI73G0994 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 2.8e-07 59.7 105 39.0
CAN.G1002.29 Capsicum annuum HOM05D000053 ORTHO05D000035 3.6e-07 59.3 95 43.2
Lsat_1_v5_gn_7_49561 Lactuca sativa HOM05D000021 ORTHO05D000010 3.6e-07 59.3 112 33.0
Potri.012G007800 Populus trichocarpa HOM05D000053 ORTHO05D000001 3.6e-07 59.3 208 28.4
ClCG01G010560 Citrullus lanatus HOM05D000071 ORTHO05D000029 4.7e-07 58.9 165 31.5
Ciclev10027022m.g Citrus clementina HOM05D000053 ORTHO05D000448 4.7e-07 58.9 111 41.4
Ciclev10027041m.g Citrus clementina HOM05D000053 ORTHO05D000448 4.7e-07 58.9 111 41.4
FAN25G3207 Fragaria x ananassa HOM05D001506 ORTHO05D000455 4.7e-07 58.9 163 34.4
RcHm_v2.0_Chr5g0029441 Rosa chinensis HOM05D000071 ORTHO05D000029 4.7e-07 58.9 154 29.9
Solyc09g064670.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.7e-07 58.9 174 27.6
CAN.G515.3 Capsicum annuum HOM05D000053 ORTHO05D000035 6.2e-07 58.5 46 69.6
Ciclev10017650m.g Citrus clementina HOM05D000053 ORTHO05D000035 6.2e-07 58.5 192 30.7
ECA246G1828 Erigeron canadensis HOM05D000071 ORTHO05D000029 6.2e-07 58.5 108 35.2
Peaxi162Scf00062g00217 Petunia axillaris HOM05D000053 ORTHO05D000035 6.2e-07 58.5 120 36.7
Prupe.2G130900 Prunus persica HOM05D000053 ORTHO05D000035 6.2e-07 58.5 183 29.0
CiPaw.02G112100 Carya illinoinensis HOM05D000053 ORTHO05D000035 1.1e-06 57.8 173 30.6
Eucgr.K00632 Eucalyptus grandis HOM05D000053 ORTHO05D000035 1.1e-06 57.8 105 37.1
Cfa017122 Carpinus fangiana HOM05D000053 ORTHO05D000448 1.4e-06 57.4 118 34.7
DCAR_001832 Daucus carota HOM05D000053 ORTHO05D000035 1.4e-06 57.4 168 28.6
Duzib138G1125 Durio zibethinus HOM05D000053 ORTHO05D000035 1.4e-06 57.4 163 29.4
HanXRQChr08g0223411 Helianthus annuus HOM05D000071 ORTHO05D000029 1.4e-06 57.4 107 36.4
TPR.G25126 Trifolium pratense HOM05D000053 ORTHO05D000035 1.4e-06 57.4 158 31.6
PGR031G1664 Punica granatum HOM05D000053 ORTHO05D000448 1.8e-06 57.0 114 31.6
arahy.Tifrunner.gnm1.ann1.M9TY0X Arachis hypogaea HOM05D000071 ORTHO05D000029 2.3e-06 56.6 109 34.9
FAN02G3661 Fragaria x ananassa HOM05D000053 ORTHO05D000448 2.3e-06 56.6 154 27.9
Peaxi162Scf00062g02014 Petunia axillaris HOM05D000053 ORTHO05D000035 2.3e-06 56.6 110 38.2
TWI38G2367 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 2.3e-06 56.6 150 31.3
Cc00_g16950 Coffea canephora HOM05D000053 ORTHO05D012842 3.1e-06 56.2 186 26.9
Glyma.01G126900 Glycine max HOM05D000053 ORTHO05D000448 3.1e-06 56.2 144 36.8
QL01p030125 Quercus lobata HOM05D000053 ORTHO05D000035 3.1e-06 56.2 48 58.3
RcHm_v2.0_Chr7g0206621 Rosa chinensis HOM05D000071 ORTHO05D000029 3.1e-06 56.2 171 29.2
Medtr5g086600 Medicago truncatula HOM05D000053 ORTHO05D000035 4.0e-06 55.8 168 31.5
Peaxi162Scf00062g00216 Petunia axillaris HOM05D000053 ORTHO05D000035 4.0e-06 55.8 118 35.6
arahy.Tifrunner.gnm1.ann1.XTV6UZ Arachis hypogaea HOM05D000053 ORTHO05D000035 5.2e-06 55.5 71 45.1
CSS0028292 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 5.2e-06 55.5 147 32.7
ECA246G3571 Erigeron canadensis HOM05D000053 ORTHO05D000035 5.2e-06 55.5 105 35.2
Eucgr.K00646 Eucalyptus grandis HOM05D000053 ORTHO05D000035 5.2e-06 55.5 105 36.2
QL07p003250 Quercus lobata HOM05D000053 ORTHO05D000035 5.2e-06 55.5 49 57.1
QL12p009182 Quercus lobata HOM05D000053 ORTHO05D000035 5.2e-06 55.5 73 38.4
CAN.G383.13 Capsicum annuum HOM05D000185 ORTHO05D000105 6.8e-06 55.1 46 67.4
Duzib093G1648 Durio zibethinus HOM05D000053 ORTHO05D000035 6.8e-06 55.1 50 52.0
Duzib138G1296 Durio zibethinus HOM05D000053 ORTHO05D000035 6.8e-06 55.1 163 30.1
HanXRQChr07g0202811 Helianthus annuus HOM05D000053 ORTHO05D000035 6.8e-06 55.1 140 32.9
Lj5A639T15 Lonicera japonica HOM05D000053 ORTHO05D000448 6.8e-06 55.1 202 28.2
RcHm_v2.0_Chr1g0340481 Rosa chinensis HOM05D000053 ORTHO05D000035 6.8e-06 55.1 192 31.8
SGA_v2.0_scaffold269G46247 Striga asiatica HOM05D000029 ORTHO05D001395 6.8e-06 55.1 107 39.3
Thecc.10G166700 Theobroma cacao HOM05D000053 ORTHO05D000035 6.8e-06 55.1 57 52.6
vmacro06853 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 6.8e-06 55.1 129 35.7
arahy.Tifrunner.gnm1.ann1.2E2S80 Arachis hypogaea HOM05D000053 ORTHO05D000035 8.9e-06 54.7 99 37.4
CANSAT11G1442 Cannabis sativa HOM05D000053 ORTHO05D000035 8.9e-06 54.7 107 32.7
Ciclev10010471m.g Citrus clementina HOM05D000071 ORTHO05D000029 8.9e-06 54.7 161 29.2
Gorai.012G117000 Gossypium raimondii HOM05D000053 ORTHO05D000448 8.9e-06 54.7 127 33.1
QL09p046045 Quercus lobata HOM05D000053 ORTHO05D000035 8.9e-06 54.7 49 57.1


User provided reference genes

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