Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0020917g0010 Nicotiana tabacum HOM05D002366 ORTHO05D014666 2.8e-73 278.5 137 100.0
Nitab4.5_0001822g0030 Nicotiana tabacum HOM05D002366 ORTHO05D014666 2.3e-35 152.5 112 68.8
Solyc01g005040.3 Solanum lycopersicum HOM05D002366 ORTHO05D014666 4.1e-32 141.7 111 60.4
Nitab4.5_0000175g0210 Nicotiana tabacum HOM05D002366 ORTHO05D014666 7.0e-32 141.0 114 65.8
Sopen01g001060 Solanum pennellii HOM05D000238 ORTHO05D001156 1.5e-31 139.8 111 59.5
Nitab4.5_0002202g0040 Nicotiana tabacum HOM05D002366 ORTHO05D014666 7.7e-31 137.5 106 64.2
Nitab4.5_0002905g0040 Nicotiana tabacum HOM05D002366 ORTHO05D014666 3.8e-30 135.2 95 67.4
Nitab4.5_0001822g0040 Nicotiana tabacum HOM05D002366 ORTHO05D014666 1.4e-29 133.3 72 90.3
Peaxi162Scf00033g02314 Petunia axillaris HOM05D002366 ORTHO05D014666 1.8e-24 116.3 111 50.5
Migut.E00564 Erythranthe guttata HOM05D002366 ORTHO05D002499 1.2e-20 103.6 111 46.8
PGSC0003DMG400022768 Solanum tuberosum HOM05D019649 ORTHO05D014666 1.2e-20 103.6 108 47.2
ECA233G2103 Erigeron canadensis HOM05D002366 ORTHO05D002499 3.4e-18 95.5 125 44.8
Dinv20493 Davidia involucrata HOM05D002366 ORTHO05D002499 9.7e-18 94.0 124 41.9
Dinv20549 Davidia involucrata HOM05D002366 ORTHO05D002499 9.7e-18 94.0 124 41.9
Nitab4.5_0002202g0030 Nicotiana tabacum HOM05D019649 ORTHO05D014666 2.7e-15 85.9 131 36.6
SalBow2G3130 Salvia bowleyana HOM05D002366 ORTHO05D002499 3.5e-15 85.5 126 36.5
Cc08_g03880 Coffea canephora HOM05D002366 ORTHO05D002499 5.9e-15 84.7 108 39.8
Peaxi162Scf00025g00018 Petunia axillaris HOM05D019649 ORTHO05D014666 8.5e-14 80.9 46 80.4
Peaxi162Scf00025g00019 Petunia axillaris HOM05D019649 ORTHO05D014666 3.2e-13 79.0 63 60.3
DCAR_023535 Daucus carota HOM05D002366 ORTHO05D002499 9.4e-13 77.4 129 34.9
GSVIVG01016541001 Vitis vinifera HOM05D002366 ORTHO05D002499 2.1e-12 76.3 120 37.5
Oeu019149.1 Olea europaea HOM05D002366 ORTHO05D002499 4.7e-12 75.1 113 35.4
Potri.012G040100 Populus trichocarpa HOM05D002366 ORTHO05D002499 1.0e-11 73.9 137 28.5
Lsat_1_v5_gn_7_29321 Lactuca sativa HOM05D002366 ORTHO05D002499 4.0e-11 72.0 145 30.3
Manes.17G090200 Manihot esculenta HOM05D002366 ORTHO05D002499 5.2e-11 71.6 122 32.8
Dinv20495 Davidia involucrata HOM05D002366 ORTHO05D002499 6.8e-11 71.2 141 31.2
Sopen03g031880 Solanum pennellii HOM05D002366 ORTHO05D002499 8.8e-11 70.9 108 34.3
Lsat_1_v5_gn_8_34180 Lactuca sativa HOM05D002366 ORTHO05D002499 1.2e-10 70.5 127 33.9
Aqoxy3G04031 Aquilegia oxysepala HOM05D002366 ORTHO05D002499 1.5e-10 70.1 129 29.5
GSVIVG01016540001 Vitis vinifera HOM05D002366 ORTHO05D002499 1.5e-10 70.1 119 34.5
Nitab4.5_0001243g0010 Nicotiana tabacum HOM05D002366 ORTHO05D002499 2.0e-10 69.7 130 29.2
PGSC0003DMG400037321 Solanum tuberosum HOM05D002366 ORTHO05D002499 2.6e-10 69.3 112 33.9
Oeu016217.1 Olea europaea HOM05D002366 ORTHO05D002499 3.4e-10 68.9 127 34.6
Peaxi162Scf00171g00733 Petunia axillaris HOM05D002366 ORTHO05D002499 3.4e-10 68.9 120 33.3
Actinidia28014 Actinidia chinensis HOM05D002366 ORTHO05D002499 7.5e-10 67.8 125 31.2
CSS0010618 Camellia sinensis var. sinensis HOM05D002366 ORTHO05D002499 7.5e-10 67.8 111 36.9
Glyma.16G219700 Glycine max HOM05D002366 ORTHO05D002499 7.5e-10 67.8 121 33.1
Sopen03g028790 Solanum pennellii HOM05D002366 ORTHO05D002499 7.5e-10 67.8 123 31.7
MBI13_g21678_MAGBIO Magnolia biondii HOM05D002366 ORTHO05D002499 9.8e-10 67.4 139 29.5
Dinv20547 Davidia involucrata HOM05D002366 ORTHO05D002499 1.3e-09 67.0 152 29.6
Nitab4.5_0004454g0030 Nicotiana tabacum HOM05D002366 ORTHO05D002499 1.3e-09 67.0 120 30.0
ECA232G1962 Erigeron canadensis HOM05D000340 ORTHO05D000821 1.7e-09 66.6 75 37.3
Solyc03g098090.2 Solanum lycopersicum HOM05D002366 ORTHO05D002499 1.7e-09 66.6 123 31.7
RcHm_v2.0_Chr7g0177721 Rosa chinensis HOM05D002366 ORTHO05D002499 2.2e-09 66.2 123 31.7
SalBow2G2007 Salvia bowleyana HOM05D002366 ORTHO05D002499 2.2e-09 66.2 127 35.4
Peaxi162Scf00358g00614 Petunia axillaris HOM05D002366 ORTHO05D002499 2.8e-09 65.9 113 31.9
PGR083G2740 Punica granatum HOM05D002366 ORTHO05D002499 2.8e-09 65.9 127 29.9
RcHm_v2.0_Chr7g0177731 Rosa chinensis HOM05D002366 ORTHO05D002499 3.7e-09 65.5 143 26.6
Cc04_g09120 Coffea canephora HOM05D002366 ORTHO05D002499 4.8e-09 65.1 123 29.3
DCAR_019173 Daucus carota HOM05D002366 ORTHO05D002499 4.8e-09 65.1 119 32.8
Oeu048250.1 Olea europaea HOM05D002366 ORTHO05D002499 4.8e-09 65.1 111 36.9
Phvul.004G145701 Phaseolus vulgaris HOM05D002366 ORTHO05D002499 4.8e-09 65.1 108 35.2
Dinv26005 Davidia involucrata HOM05D002366 ORTHO05D002499 6.3e-09 64.7 111 35.1
Thecc.03G067200 Theobroma cacao HOM05D002366 ORTHO05D002499 6.3e-09 64.7 115 30.4
Dinv15677 Davidia involucrata HOM05D002366 ORTHO05D002499 8.3e-09 64.3 115 28.7
Psat1g123560 Pisum sativum HOM05D002366 ORTHO05D002499 8.3e-09 64.3 118 32.2
Atru.chr11.990 Acer truncatum HOM05D002366 ORTHO05D002499 1.1e-08 63.9 127 27.6
Oeu040913.1 Olea europaea HOM05D002366 ORTHO05D002499 1.1e-08 63.9 127 31.5
TWI38G1308 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 1.1e-08 63.9 119 31.1
VMungo0464G0502 Vigna mungo HOM05D002366 ORTHO05D002499 1.1e-08 63.9 123 33.3
CANSAT01G2159 Cannabis sativa HOM05D002366 ORTHO05D002499 1.4e-08 63.5 138 29.7
FvH4_5g17870 Fragaria vesca HOM05D002366 ORTHO05D002499 1.4e-08 63.5 134 29.9
FAN18G0936 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.4e-08 63.5 134 29.9
Dinv26006 Davidia involucrata HOM05D002366 ORTHO05D002499 1.8e-08 63.2 118 36.4
Migut.I00570 Erythranthe guttata HOM05D002366 ORTHO05D002499 1.8e-08 63.2 98 30.6
FAN08G0111 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.8e-08 63.2 123 27.6
FAN13G0088 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.8e-08 63.2 123 27.6
Gohir.A10G217500 Gossypium hirsutum HOM05D002366 ORTHO05D002499 1.8e-08 63.2 111 30.6
Gorai.011G257400 Gossypium raimondii HOM05D002366 ORTHO05D002499 1.8e-08 63.2 111 30.6
Nitab4.5_0025009g0010 Nicotiana tabacum HOM05D002366 ORTHO05D002499 1.8e-08 63.2 120 30.0
Sabra10G0158200 Salix brachista HOM05D002366 ORTHO05D002499 1.8e-08 63.2 119 30.3
Atru.chr9.1589 Acer truncatum HOM05D002366 ORTHO05D002499 3.1e-08 62.4 129 25.6
FAN13G1140 Fragaria x ananassa HOM05D002366 ORTHO05D002499 3.1e-08 62.4 134 29.1
Thecc.10G043700 Theobroma cacao HOM05D002366 ORTHO05D002499 3.1e-08 62.4 111 31.5
VMungo0464G0902 Vigna mungo HOM05D002366 ORTHO05D002499 3.1e-08 62.4 122 34.4
Prupe.5G239200 Prunus persica HOM05D002366 ORTHO05D002499 4.1e-08 62.0 135 24.4
Gohir.D10G226600 Gossypium hirsutum HOM05D002366 ORTHO05D002499 5.4e-08 61.6 111 29.7
Duzib205G0226 Durio zibethinus HOM05D002366 ORTHO05D002499 9.1e-08 60.8 115 32.2
Gohir.D10G226300 Gossypium hirsutum HOM05D002366 ORTHO05D002499 1.2e-07 60.5 111 29.7
PGSC0003DMG400027047 Solanum tuberosum HOM05D002366 ORTHO05D002499 1.2e-07 60.5 134 26.9
TWI74G0850 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 1.2e-07 60.5 121 28.1
FvH4_5g17860 Fragaria vesca HOM05D002366 ORTHO05D002499 1.6e-07 60.1 123 26.8
FAN18G2907 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.6e-07 60.1 123 26.8
Dinv31454 Davidia involucrata HOM05D002366 ORTHO05D002499 2.0e-07 59.7 111 34.2
Glyma.07G107600 Glycine max HOM05D002366 ORTHO05D002499 2.0e-07 59.7 139 26.6
Phvul.004G145800 Phaseolus vulgaris HOM05D002366 ORTHO05D002499 2.0e-07 59.7 85 32.9
RcHm_v2.0_Chr1g0366591 Rosa chinensis HOM05D002366 ORTHO05D002499 2.0e-07 59.7 117 29.1
Glyma.09G170100 Glycine max HOM05D002366 ORTHO05D002499 2.7e-07 59.3 137 25.5
SalBow6G6566 Salvia bowleyana HOM05D002366 ORTHO05D002499 2.7e-07 59.3 111 31.5
CDE07G1817 Ceratophyllum demersum HOM05D002366 ORTHO05D002499 3.5e-07 58.9 112 30.4
COL.COLO4_32729 Corchorus olitorius HOM05D002366 ORTHO05D002499 3.5e-07 58.9 115 32.2
DCAR_027633 Daucus carota HOM05D002366 ORTHO05D002499 3.5e-07 58.9 118 33.1
Oeu042016.1 Olea europaea HOM05D002366 ORTHO05D002499 3.5e-07 58.9 110 32.7
SalBow3G2180 Salvia bowleyana HOM05D002366 ORTHO05D002499 3.5e-07 58.9 111 32.4
Migut.F01504 Erythranthe guttata HOM05D002366 ORTHO05D002499 4.5e-07 58.5 109 32.1
Peaxi162Scf00171g00734 Petunia axillaris HOM05D002366 ORTHO05D002499 4.5e-07 58.5 69 36.2
SalBow6G6394 Salvia bowleyana HOM05D002366 ORTHO05D002499 4.5e-07 58.5 111 31.5
Cc02_g07930 Coffea canephora HOM05D002366 ORTHO05D002499 5.9e-07 58.2 111 34.2
Haze_17054 Corylus avellana HOM05D002366 ORTHO05D002499 5.9e-07 58.2 117 33.3
Haze_17057 Corylus avellana HOM05D002366 ORTHO05D002499 7.7e-07 57.8 130 28.5
Cc02_g07950 Coffea canephora HOM05D002366 ORTHO05D002499 1.0e-06 57.4 111 31.5
Peaxi162Scf00760g00219 Petunia axillaris HOM05D002366 ORTHO05D002499 1.0e-06 57.4 112 32.1
PGSC0003DMG400035890 Solanum tuberosum HOM05D002366 ORTHO05D002499 1.0e-06 57.4 118 32.2
CANSAT56G2475 Cannabis sativa HOM05D002366 ORTHO05D002499 1.3e-06 57.0 111 29.7
CANSAT56G4267 Cannabis sativa HOM05D002366 ORTHO05D002499 1.3e-06 57.0 111 29.7
Lj2g0004495 Lotus japonicus HOM05D002366 ORTHO05D002499 1.3e-06 57.0 118 28.0
TPR.G28607 Trifolium pratense HOM05D002366 ORTHO05D002499 1.3e-06 57.0 118 30.5
TAR629G0597 Trochodendron aralioides HOM05D002366 ORTHO05D002499 1.7e-06 56.6 75 40.0
Migut.E00565 Erythranthe guttata HOM05D002366 ORTHO05D002499 2.3e-06 56.2 82 36.6
VMungo0464G1622 Vigna mungo HOM05D002366 ORTHO05D002499 2.3e-06 56.2 85 30.6
Solyc06g072350.3 Solanum lycopersicum HOM05D002366 ORTHO05D002499 2.9e-06 55.8 139 23.7
Haze_18933 Corylus avellana HOM05D002366 ORTHO05D002499 3.8e-06 55.5 108 34.3
Medtr6g073040 Medicago truncatula HOM05D002366 ORTHO05D002499 3.8e-06 55.5 119 28.6
Medtr6g073090 Medicago truncatula HOM05D002366 ORTHO05D002499 3.8e-06 55.5 119 28.6
Nitab4.5_0000033g0360 Nicotiana tabacum HOM05D002366 ORTHO05D002499 3.8e-06 55.5 139 24.5
TWI81G0381 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 3.8e-06 55.5 92 29.3
CANSAT56G4227 Cannabis sativa HOM05D002366 ORTHO05D002499 5.0e-06 55.1 130 28.5
Duzib114G1053 Durio zibethinus HOM05D002366 ORTHO05D002499 5.0e-06 55.1 111 31.5
Manes.14G174100 Manihot esculenta HOM05D002366 ORTHO05D002499 5.0e-06 55.1 129 25.6
Aa31LG5G20080 Aethionema arabicum HOM05D002366 ORTHO05D002499 6.6e-06 54.7 123 29.3
Cfa001486 Carpinus fangiana HOM05D002366 ORTHO05D002499 6.6e-06 54.7 122 34.4
Oeu042759.1 Olea europaea HOM05D002366 ORTHO05D002499 6.6e-06 54.7 119 30.3
Sabra10G0158300 Salix brachista HOM05D002366 ORTHO05D002499 6.6e-06 54.7 110 27.3
MELO3C021645.2 Cucumis melo HOM05D002366 ORTHO05D002499 8.6e-06 54.3 111 30.6
Lalb_Chr10g0091701 Lupinus albus HOM05D002366 ORTHO05D002499 8.6e-06 54.3 108 28.7


User provided reference genes

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