Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0020511g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.7e-73 278.1 139 100.0
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.6e-53 211.1 144 77.1
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-51 206.8 148 75.7
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.8e-50 200.3 148 71.6
Nitab4.5_0001425g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.7e-47 192.2 135 75.6
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.1e-43 178.7 118 78.8
Nitab4.5_0001057g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.0e-42 176.0 108 82.4
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-41 173.3 118 77.1
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.2e-40 167.2 179 57.0
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.2e-40 167.2 118 75.4
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-38 163.7 118 73.7
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-38 163.3 118 73.7
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-38 163.3 115 74.8
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.6e-38 161.0 118 72.9
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.6e-38 161.0 118 71.2
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-37 160.2 115 73.0
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.8e-36 155.6 118 66.9
Nitab4.5_0000255g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-35 152.9 103 78.6
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-34 148.7 138 61.6
Nitab4.5_0006678g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-33 146.4 139 60.4
Nitab4.5_0017747g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.2e-33 146.0 104 74.0
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.9e-33 144.8 103 73.8
Nitab4.5_0013466g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.9e-32 142.9 126 66.7
Nitab4.5_0000098g0180 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.1e-32 141.0 153 55.6
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.3e-30 136.0 78 85.9
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.0e-30 135.6 97 72.2
Nitab4.5_0016795g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.6e-29 131.3 72 88.9
Nitab4.5_0011275g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-28 130.2 92 72.8
Nitab4.5_0000677g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.8e-28 129.0 102 72.5
Nitab4.5_0002534g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.8e-26 121.3 89 71.9
Nitab4.5_0000403g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.9e-25 119.0 91 71.4
Nitab4.5_0000662g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.4e-25 117.9 73 78.1
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.4e-25 117.9 118 58.5
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-24 117.1 155 50.3
Nitab4.5_0002052g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.1e-24 115.2 101 63.4
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.5e-21 106.7 99 64.6
Nitab4.5_0003994g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.6e-20 102.1 69 76.8
Nitab4.5_0000034g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-19 99.8 60 80.0
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-19 99.8 69 75.4
Nitab4.5_0003966g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.6e-18 95.9 94 59.6
Nitab4.5_0000125g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-17 93.2 77 63.6
Nitab4.5_0001969g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-16 90.1 74 62.2
Nitab4.5_0003069g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.9e-16 89.7 69 65.2
Nitab4.5_0002642g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-16 89.4 69 65.2
Nitab4.5_0001992g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.2e-16 88.6 88 59.1
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.1e-16 87.8 70 65.7
Nitab4.5_0014959g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.1e-16 87.8 103 55.3
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-15 86.7 58 74.1
Nitab4.5_0001146g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.5e-15 85.5 118 50.8
Nitab4.5_0000125g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-14 84.0 69 62.3
Nitab4.5_0002908g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-14 83.6 99 52.5
Nitab4.5_0000404g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-14 83.2 48 85.4
Nitab4.5_0024778g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.7e-14 80.9 73 61.6
Nitab4.5_0001771g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.9e-13 79.7 49 79.6
Nitab4.5_0001177g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.6e-13 77.4 58 70.7
Nitab4.5_0001114g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.1e-12 76.3 117 46.2
Nitab4.5_0001439g0130 Nicotiana tabacum HOM05D002262 ORTHO05D016873 8.1e-12 74.3 70 58.6
Nitab4.5_0003350g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-11 73.6 44 77.3
Peaxi162Scf01337g00004 Petunia axillaris HOM05D002262 ORTHO05D000137 1.4e-11 73.6 103 42.7
Nitab4.5_0024778g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-11 73.2 42 81.0
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 1.8e-11 73.2 96 40.6
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 4.4e-10 68.6 96 38.5
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 4.4e-10 68.6 96 38.5
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 5.8e-10 68.2 96 38.5
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 2.9e-09 65.9 96 37.5
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 2.9e-09 65.9 81 40.7
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 3.8e-09 65.5 118 34.7
Nitab4.5_0001259g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.9e-09 65.1 65 56.9
Nitab4.5_0005641g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.4e-09 64.3 31 93.5
Nitab4.5_0000377g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-08 63.9 65 55.4
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 1.4e-08 63.5 75 41.3
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.2e-08 62.4 81 39.5
Nitab4.5_0000823g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.4e-08 61.6 32 87.5
Nitab4.5_0001771g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.4e-08 61.6 54 64.8
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 5.4e-08 61.6 79 38.0
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 7.1e-08 61.2 106 34.9
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 7.1e-08 61.2 112 33.0
Nitab4.5_0004040g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.1e-08 61.2 30 90.0
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.3e-08 60.8 113 35.4
Nitab4.5_0000263g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-07 60.5 118 33.1
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 2.1e-07 59.7 109 32.1
Nitab4.5_0002357g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.5e-07 58.9 76 40.8
PGSC0003DMG400044863 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.0e-07 58.2 62 41.9
Peaxi162Scf00992g00029 Petunia axillaris HOM05D000679 ORTHO05D037292 1.0e-06 57.4 98 32.7
Nitab4.5_0000440g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-06 56.6 83 39.8
Nitab4.5_0007888g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-06 56.6 58 44.8
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.3e-06 56.2 109 31.2
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 2.3e-06 56.2 106 34.0
Nitab4.5_0028280g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.0e-06 55.8 122 32.8
Nitab4.5_0000219g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.1e-06 55.1 55 52.7
Nitab4.5_0000340g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.1e-06 55.1 49 59.2
SGA_v2.0_scaffold2356G54104 Striga asiatica HOM05D000679 ORTHO05D000137 5.1e-06 55.1 68 39.7
CANSAT78G0118 Cannabis sativa HOM05D009472 ORTHO05D000137 6.6e-06 54.7 106 33.0
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 8.7e-06 54.3 68 39.7


User provided reference genes

Program Settings