Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.8e-67 258.5 130 100.0
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.1e-55 219.9 118 92.4
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 8.0e-54 213.8 121 84.3
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 3.0e-53 211.8 118 88.1
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 4.0e-53 211.5 118 86.4
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.0e-52 209.1 116 87.1
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 5.0e-48 194.5 119 80.7
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.1e-47 193.4 118 79.7
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.5e-47 192.2 122 74.6
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.1e-46 189.1 119 79.8
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 1.0e-45 186.8 120 75.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.0e-45 186.8 122 73.8
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.8e-45 186.0 118 77.1
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 5.2e-45 184.5 121 77.7
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 5.2e-45 184.5 127 74.8
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 6.8e-45 184.1 121 76.0
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.2e-44 183.3 125 72.0
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.0e-44 182.6 118 78.0
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 2.0e-44 182.6 118 78.0
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.0e-44 182.6 128 72.7
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 2.6e-44 182.2 121 76.0
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.4e-44 181.4 118 74.6
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 5.8e-44 181.0 120 75.8
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 5.8e-44 181.0 132 68.9
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 5.8e-44 181.0 118 75.4
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 7.5e-44 180.6 127 71.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 7.5e-44 180.6 121 75.2
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.3e-43 179.9 120 74.2
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.2e-43 179.1 119 75.6
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.9e-43 178.7 118 72.9
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 3.7e-43 178.3 120 71.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 4.9e-43 177.9 122 73.0
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 6.4e-43 177.6 118 72.9
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 8.3e-43 177.2 118 71.2
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 8.3e-43 177.2 119 75.6
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.1e-42 176.8 119 73.9
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.1e-42 176.8 124 71.8
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.1e-42 176.8 118 71.2
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.9e-42 176.0 121 72.7
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.9e-42 176.0 117 74.4
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 2.4e-42 175.6 119 71.4
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.4e-42 175.6 118 73.7
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 3.2e-42 175.3 118 71.2
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 4.1e-42 174.9 117 70.9
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 5.4e-42 174.5 118 72.9
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 7.0e-42 174.1 123 70.7
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.0e-42 174.1 119 71.4
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 9.2e-42 173.7 132 67.4
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.2e-41 173.3 118 70.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-41 173.3 118 72.9
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.2e-41 173.3 116 73.3
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.0e-41 172.6 118 72.9
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.7e-41 172.2 125 68.8
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 7.8e-41 170.6 122 68.9
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-40 170.2 118 72.0
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.0e-40 170.2 118 71.2
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.3e-40 169.9 121 68.6
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.3e-40 169.9 121 71.9
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.7e-40 169.5 120 66.7
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.0e-40 168.7 118 69.5
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 6.6e-40 167.5 119 70.6
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 8.6e-40 167.2 118 68.6
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.1e-39 166.8 118 68.6
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.1e-39 166.8 119 70.6
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.3e-39 165.2 146 61.0
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 4.3e-39 164.9 129 68.2
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 5.6e-39 164.5 119 69.7
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 7.3e-39 164.1 118 68.6
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.2e-38 163.3 122 65.6
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-38 162.9 123 65.9
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.6e-38 162.9 119 66.4
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.6e-38 162.9 128 63.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.8e-38 162.2 117 70.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.0e-38 160.6 118 70.3
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.1e-37 160.2 118 65.3
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.1e-37 158.7 118 66.1
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 5.2e-37 157.9 127 67.7
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 8.9e-37 157.1 118 66.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 8.9e-37 157.1 129 61.2
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 2.6e-36 155.6 121 64.5
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 4.4e-36 154.8 118 64.4
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 7.5e-36 154.1 122 65.6
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 7.5e-36 154.1 118 66.9
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.3e-35 153.3 120 65.8
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.3e-35 153.3 121 66.1
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.3e-35 153.3 118 66.1
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.7e-35 152.9 119 65.5
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.7e-35 152.9 118 63.6
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 2.9e-35 152.1 119 64.7
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 2.9e-35 152.1 119 64.7
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 2.9e-35 152.1 120 63.3
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 3.7e-35 151.8 127 63.8
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 6.4e-35 151.0 121 65.3
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 6.4e-35 151.0 127 63.0
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 6.4e-35 151.0 127 63.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 8.3e-35 150.6 118 64.4
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.4e-34 149.1 121 64.5
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 2.4e-34 149.1 127 62.2
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.4e-34 147.9 118 67.8
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 5.4e-34 147.9 159 49.7
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.2e-33 146.7 119 62.2
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.2e-30 136.7 126 55.6
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.3e-27 126.7 74 78.4
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 9.2e-26 120.6 133 51.1
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 3.9e-24 115.2 128 50.8
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 2.5e-23 112.5 71 71.8
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 8.1e-22 107.5 128 48.4
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 8.9e-21 104.0 120 47.5
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.4e-20 101.7 57 78.9
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 5.6e-15 84.7 68 67.6
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.1e-14 82.8 128 34.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 4.8e-14 81.6 75 58.7
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.1e-13 80.5 50 70.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 5.3e-13 78.2 115 38.3
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 2.3e-08 62.8 107 35.5


User provided reference genes

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