Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-73 279.6 137 100.0
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.1e-16 90.5 44 95.5
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 9.1e-16 87.4 44 93.2
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.2e-15 87.0 44 93.2
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.0e-15 86.3 44 90.9
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 2.0e-15 86.3 44 90.9
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 2.0e-15 86.3 44 90.9
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 2.0e-15 86.3 44 90.9
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.7e-15 85.9 43 93.0
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 2.7e-15 85.9 43 93.0
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 2.7e-15 85.9 43 93.0
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 2.7e-15 85.9 43 93.0
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 2.7e-15 85.9 43 93.0
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 3.5e-15 85.5 44 90.9
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 3.5e-15 85.5 44 90.9
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 88.6
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 7.7e-15 84.3 44 90.9
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.0e-14 84.0 44 90.9
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.3e-14 83.6 44 90.9
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.3e-14 83.6 44 90.9
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.9e-14 82.4 43 90.7
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 2.9e-14 82.4 44 88.6
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 5.0e-14 81.6 43 90.7
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 5.0e-14 81.6 43 90.7
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 5.0e-14 81.6 43 90.7
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 5.0e-14 81.6 43 90.7
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 5.0e-14 81.6 44 86.4
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-14 81.6 44 86.4
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-14 81.6 44 86.4
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 6.5e-14 81.3 44 88.6
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 8.5e-14 80.9 42 90.5
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-13 80.5 44 84.1
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-13 79.7 41 90.2
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-13 79.7 41 90.2
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-13 79.7 41 90.2
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.9e-13 79.7 41 90.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-13 79.7 44 84.1
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-13 79.7 44 84.1
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-13 79.7 44 84.1
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.5e-13 79.3 44 84.1
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 3.2e-13 79.0 40 92.5
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 3.2e-13 79.0 40 92.5
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 3.2e-13 79.0 43 88.4
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 3.2e-13 79.0 40 92.5
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 3.2e-13 79.0 40 92.5
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 3.2e-13 79.0 40 92.5
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-13 78.2 44 81.8
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-13 78.2 44 84.1
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-13 78.2 44 84.1
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-13 78.2 44 81.8
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-13 78.2 43 83.7
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.2e-13 77.8 43 86.0
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-13 77.8 43 83.7
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.2e-12 77.0 39 92.3
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-12 77.0 42 85.7
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-12 77.0 44 81.8
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-12 77.0 42 85.7
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-12 76.6 44 79.5
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-12 76.6 44 79.5
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-12 76.6 44 79.5
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-12 76.6 44 79.5
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.1e-12 76.3 41 87.8
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.1e-12 76.3 44 79.5
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-12 76.3 44 81.8
Nitab4.5_0005530g0010 Nicotiana tabacum HOM05D011554 ORTHO05D019309 2.7e-12 75.9 48 81.2
Nitab4.5_0001788g0280 Nicotiana tabacum HOM05D011554 ORTHO05D019309 3.6e-12 75.5 44 84.1
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-12 75.5 44 79.5
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-12 75.5 43 81.4
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-12 75.1 44 79.5
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 8.0e-12 74.3 44 77.3
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 8.0e-12 74.3 45 77.8
Nitab4.5_0000172g0900 Nicotiana tabacum HOM05D011554 ORTHO05D019309 1.0e-11 73.9 71 56.3
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-11 73.9 42 81.0
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-11 73.9 42 81.0
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-11 73.6 44 77.3
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-11 73.6 113 44.2
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-11 73.2 41 82.9
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-11 72.0 44 79.5
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-11 71.6 44 77.3
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-10 70.1 42 76.2
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-10 69.7 42 78.6
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.6e-10 69.3 42 78.6
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-10 67.8 42 76.2
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-10 67.8 39 82.1
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-10 67.8 39 79.5
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-10 67.4 40 80.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-10 67.4 39 79.5
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-09 66.6 41 78.0
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.8e-09 65.9 38 78.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-09 65.1 36 80.6
Nitab4.5_0000172g1300 Nicotiana tabacum HOM05D011554 ORTHO05D019309 5.4e-08 61.6 41 73.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 7.0e-08 61.2 32 90.6
Nitab4.5_0001023g0050 Nicotiana tabacum HOM05D011554 ORTHO05D014067 7.0e-08 61.2 37 81.1
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 4.5e-07 58.5 38 68.4
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 7.7e-07 57.8 35 77.1
Nitab4.5_0000031g0170 Nicotiana tabacum HOM05D011554 ORTHO05D019309 1.7e-06 56.6 40 70.0
Nitab4.5_0001796g0110 Nicotiana tabacum HOM05D011554 ORTHO05D019309 1.7e-06 56.6 37 75.7
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-06 56.6 34 76.5
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 3.8e-06 55.5 30 90.0


User provided reference genes

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