Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.2e-65 251.1 122 100.0
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.1e-64 248.8 122 99.2
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 6.8e-63 243.8 122 96.7
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 6.8e-63 243.8 122 97.5
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 1.2e-62 243.0 122 96.7
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 2.6e-62 241.9 122 95.9
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 3.4e-62 241.5 122 95.9
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 7.5e-62 240.4 122 95.9
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 6.3e-61 237.3 122 95.9
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 1.2e-54 216.5 114 90.4
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 8.3e-53 210.3 115 86.1
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 1.9e-52 209.1 115 86.1
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 9.2e-52 206.8 114 86.0
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 2.7e-51 205.3 114 86.8
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 3.5e-51 204.9 115 87.0
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 6.0e-51 204.1 111 86.5
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 7.8e-51 203.8 111 85.6
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 1.0e-50 203.4 115 83.5
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 1.3e-50 203.0 111 85.6
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 5.0e-50 201.1 114 81.6
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 1.1e-49 199.9 115 84.3
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 2.5e-49 198.7 114 81.6
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 3.3e-49 198.4 113 83.2
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 3.3e-49 198.4 114 81.6
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 4.3e-49 198.0 113 82.3
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 4.3e-49 198.0 114 82.5
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 5.6e-49 197.6 112 83.0
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 9.5e-49 196.8 112 82.1
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 9.5e-49 196.8 111 83.8
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.2e-48 196.4 112 82.1
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.6e-48 196.1 117 76.9
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 1.6e-48 196.1 111 83.8
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 2.1e-48 195.7 114 80.7
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 2.1e-48 195.7 115 80.9
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 2.8e-48 195.3 109 85.3
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 3.6e-48 194.9 115 80.9
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 3.6e-48 194.9 114 80.7
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 3.6e-48 194.9 112 83.0
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 4.7e-48 194.5 115 80.0
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 4.7e-48 194.5 113 81.4
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 6.2e-48 194.1 116 76.7
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 6.2e-48 194.1 111 81.1
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 6.2e-48 194.1 115 78.3
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 1.1e-47 193.4 108 86.1
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 1.4e-47 193.0 117 76.9
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 1.4e-47 193.0 114 78.9
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 1.8e-47 192.6 111 80.2
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 2.3e-47 192.2 117 76.9
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 2.3e-47 192.2 114 77.2
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 2.3e-47 192.2 117 75.2
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 3.1e-47 191.8 114 79.8
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 4.0e-47 191.4 113 78.8
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 4.0e-47 191.4 114 78.9
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 5.2e-47 191.0 112 82.1
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 6.8e-47 190.7 117 75.2
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 1.5e-46 189.5 114 78.1
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 4.4e-46 188.0 114 78.9
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 7.5e-46 187.2 108 81.5
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 9.8e-46 186.8 111 79.3
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 1.7e-45 186.0 111 76.6
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 1.7e-45 186.0 111 80.2
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 1.7e-45 186.0 115 76.5
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 2.2e-45 185.7 115 78.3
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 2.2e-45 185.7 111 77.5
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 2.9e-45 185.3 112 75.9
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 2.9e-45 185.3 114 76.3
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 2.9e-45 185.3 115 77.4
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 4.9e-45 184.5 114 76.3
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 8.3e-45 183.7 114 75.4
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 1.4e-44 183.0 114 75.4
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 1.9e-44 182.6 114 75.4
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 1.9e-44 182.6 114 75.4
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 2.4e-44 182.2 115 74.8
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 3.2e-44 181.8 115 71.3
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 3.2e-44 181.8 114 73.7
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 5.4e-44 181.0 111 73.9
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 9.2e-44 180.3 111 73.9
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 9.2e-44 180.3 111 73.9
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 9.2e-44 180.3 109 77.1
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 1.2e-43 179.9 111 73.0
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 1.6e-43 179.5 111 73.9
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 1.6e-43 179.5 111 74.8
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 1.6e-43 179.5 113 75.2
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 1.6e-43 179.5 116 72.4
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 4.6e-43 177.9 111 73.9
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 4.6e-43 177.9 111 73.0
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 1.0e-42 176.8 112 75.0
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 3.0e-42 175.3 138 63.8
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 5.1e-42 174.5 114 74.6
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 1.9e-41 172.6 111 71.2
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 1.9e-41 172.6 111 71.2
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 2.5e-41 172.2 112 69.6
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 2.5e-41 172.2 115 72.2
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 4.3e-41 171.4 120 69.2
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 7.3e-41 170.6 126 65.1
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 2.1e-40 169.1 111 70.3
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 8.1e-40 167.2 132 61.4
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 1.1e-39 166.8 101 74.3
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 2.3e-39 165.6 111 69.4
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 5.2e-39 164.5 100 77.0
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.9e-37 158.7 108 68.5
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 8.3e-37 157.1 109 67.9
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 4.1e-36 154.8 108 67.6
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.6e-35 152.9 108 69.4
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 3.0e-34 148.7 108 63.0
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 6.6e-34 147.5 115 62.6
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.9e-33 146.0 83 78.3
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 4.3e-33 144.8 106 63.2
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 1.2e-32 143.3 132 56.8
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 2.1e-32 142.5 85 74.1
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 3.6e-32 141.7 73 93.2
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 8.1e-32 140.6 109 68.8
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 2.4e-31 139.0 84 73.8
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 3.4e-30 135.2 177 45.2
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 5.8e-30 134.4 88 73.9
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 2.2e-29 132.5 107 57.9
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 4.2e-28 128.3 67 85.1
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 1.6e-27 126.3 106 53.8
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 2.7e-27 125.6 112 49.1
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 4.6e-27 124.8 78 74.4
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 4.6e-27 124.8 78 74.4
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 4.6e-27 124.8 70 85.7
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 6.2e-24 114.4 70 78.6
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 5.3e-23 111.3 74 68.9
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 4.4e-22 108.2 72 63.9
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 9.9e-22 107.1 118 46.6
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 4.9e-21 104.8 61 82.0
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 7.1e-20 100.9 135 38.5
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 1.2e-19 100.1 78 60.3
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.7e-18 96.3 57 73.7
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 8.7e-18 94.0 54 83.3
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 3.3e-17 92.0 56 73.2
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 7.6e-14 80.9 48 81.2
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 1.4e-12 76.6 52 67.3
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 3.0e-10 68.9 58 58.6
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 2.5e-09 65.9 60 55.0
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 5.3e-07 58.2 38 63.2


User provided reference genes

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