Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018891g0010 Nicotiana tabacum HOM05D002065 ORTHO05D002050 9.5e-39 162.9 76 100.0
Nitab4.5_0000092g0090 Nicotiana tabacum HOM05D002065 ORTHO05D002050 9.8e-36 152.9 80 91.2
Peaxi162Scf01086g00113 Petunia axillaris HOM05D002065 ORTHO05D002050 2.6e-28 128.3 80 76.2
PGSC0003DMG400025621 Solanum tuberosum HOM05D002065 ORTHO05D002050 2.0e-25 118.6 80 73.8
Sopen12g001210 Solanum pennellii HOM05D002065 ORTHO05D002050 1.0e-24 116.3 81 71.6
Solyc12g005230.3 Solanum lycopersicum HOM05D001540 ORTHO05D001520 8.6e-24 113.2 81 70.4
Peaxi162Scf00192g00005 Petunia axillaris HOM05D002065 ORTHO05D002050 1.1e-23 112.8 78 66.7
CAN.G140.7 Capsicum annuum HOM05D002065 ORTHO05D002050 9.5e-23 109.8 80 61.2
PGSC0003DMG400032148 Solanum tuberosum HOM05D002065 ORTHO05D002050 8.9e-21 103.2 80 58.8
PGSC0003DMG400032231 Solanum tuberosum HOM05D002065 ORTHO05D002050 8.9e-21 103.2 80 58.8
CAN.G140.6 Capsicum annuum HOM05D002065 ORTHO05D002050 1.5e-20 102.4 72 68.1
Nitab4.5_0005041g0020 Nicotiana tabacum HOM05D002065 ORTHO05D002050 4.4e-20 100.9 72 66.7
Solyc01g006320.4 Solanum lycopersicum HOM05D002065 ORTHO05D002050 9.9e-20 99.8 80 60.0
Cc05_g13270 Coffea canephora HOM05D002065 ORTHO05D002050 1.9e-18 95.5 80 57.5
Sopen01g002320 Solanum pennellii HOM05D002065 ORTHO05D002050 7.1e-18 93.6 78 59.0
Oeu042915.1 Olea europaea HOM05D002065 ORTHO05D002050 2.7e-17 91.7 80 51.2
Oeu007632.1 Olea europaea HOM05D002065 ORTHO05D002050 6.0e-17 90.5 80 53.8
Oeu062613.1 Olea europaea HOM05D002065 ORTHO05D002050 6.0e-17 90.5 80 55.0
Migut.M01810 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.0e-16 89.7 80 55.0
Oeu007631.2 Olea europaea HOM05D002065 ORTHO05D002050 5.1e-16 87.4 80 52.5
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 8.6e-16 86.7 79 54.4
Nn1g03652 Nelumbo nucifera HOM05D002065 ORTHO05D002050 1.9e-15 85.5 83 51.8
MSTRG.14416 Avicennia marina HOM05D002065 ORTHO05D002050 5.6e-15 84.0 82 53.7
SalBow8G3023 Salvia bowleyana HOM05D002065 ORTHO05D002050 5.6e-15 84.0 80 52.5
TAR626G0982 Trochodendron aralioides HOM05D002065 ORTHO05D002050 4.7e-14 80.9 79 50.6
Dinv22303 Davidia involucrata HOM05D002065 ORTHO05D002050 1.1e-13 79.7 79 48.1
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.8e-13 79.0 79 50.6
Hma1.2p1_1869F.1_g306060 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.4e-13 78.6 79 46.8
Oeu025507.1 Olea europaea HOM05D002065 ORTHO05D002050 2.4e-13 78.6 80 45.0
Peaxi162Scf01086g00158 Petunia axillaris HOM05D002065 ORTHO05D002050 6.8e-13 77.0 76 51.3
Lj8C77T5 Lonicera japonica HOM05D002065 ORTHO05D002050 8.9e-13 76.6 80 43.8
Nn1g07007 Nelumbo nucifera HOM05D002065 ORTHO05D002050 8.9e-13 76.6 83 48.2
Oeu025506.1 Olea europaea HOM05D002065 ORTHO05D002050 8.9e-13 76.6 80 43.8
Actinidia35318 Actinidia chinensis HOM05D000018 ORTHO05D001766 1.2e-12 76.3 79 46.8
Oeu025490.1 Olea europaea HOM05D002065 ORTHO05D002050 2.0e-12 75.5 80 42.5
Oeu025495.1 Olea europaea HOM05D002065 ORTHO05D002050 2.0e-12 75.5 80 42.5
Migut.M00312 Erythranthe guttata HOM05D002065 ORTHO05D002050 3.4e-12 74.7 77 45.5
Hma1.2p1_1869F.1_g306050 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 4.4e-12 74.3 79 49.4
Migut.M00321 Erythranthe guttata HOM05D002065 ORTHO05D002050 9.9e-12 73.2 81 42.0
Lj8C77T4 Lonicera japonica HOM05D002065 ORTHO05D002050 9.9e-12 73.2 81 46.9
MBI02_g10994_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.3e-11 72.8 79 48.1
Lsat_1_v5_gn_3_120800 Lactuca sativa HOM05D002065 ORTHO05D002050 2.2e-11 72.0 83 45.8
Hma1.2p1_1564F.1_g290830 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.9e-11 71.6 79 48.1
SGA_v2.0_scaffold27G11640 Striga asiatica HOM05D002065 ORTHO05D002050 2.9e-11 71.6 81 46.9
DCAR_022526 Daucus carota HOM05D002065 ORTHO05D002050 3.8e-11 71.2 75 45.3
Dinv40711 Davidia involucrata HOM05D002065 ORTHO05D001766 1.4e-10 69.3 82 48.8
MBI18_g41997_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.9e-10 68.9 79 45.6
Lsat_1_v5_gn_5_5781 Lactuca sativa HOM05D002065 ORTHO05D002050 2.4e-10 68.6 83 43.4
CANSAT64G1415 Cannabis sativa HOM05D002065 ORTHO05D002050 4.1e-10 67.8 84 40.5
PSO500G0109 Papaver somniferum HOM05D002065 ORTHO05D002050 5.4e-10 67.4 81 40.7
SalBow7G1417 Salvia bowleyana HOM05D002065 ORTHO05D002050 7.1e-10 67.0 76 38.2
RhsimUnG0253100 Rhododendron simsii HOM05D002065 ORTHO05D002050 9.2e-10 66.6 82 47.6
SalBow7G1217 Salvia bowleyana HOM05D002065 ORTHO05D002050 9.2e-10 66.6 74 40.5
Cpa.g.c26548.3 Carica papaya HOM05D002065 ORTHO05D002050 1.6e-09 65.9 79 46.8
MBI18_g44238_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.6e-09 65.9 79 44.3
Aqoxy4G02007 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 2.1e-09 65.5 80 45.0
Medtr2g082990 Medicago truncatula HOM05D002065 ORTHO05D002050 2.1e-09 65.5 81 48.1
PSO063G4351 Papaver somniferum HOM05D002065 ORTHO05D002050 2.1e-09 65.5 78 39.7
Manes.15G076400 Manihot esculenta HOM05D002065 ORTHO05D002050 2.7e-09 65.1 79 46.8
RcHm_v2.0_Chr5g0037701 Rosa chinensis HOM05D002065 ORTHO05D002050 6.0e-09 63.9 79 43.0
Manes.03G123200 Manihot esculenta HOM05D002065 ORTHO05D002050 7.8e-09 63.5 79 45.6
SalBow7G3313 Salvia bowleyana HOM05D002065 ORTHO05D002050 7.8e-09 63.5 80 38.8
FAN21G3193 Fragaria x ananassa HOM05D002065 ORTHO05D002050 1.0e-08 63.2 81 42.0
PSO541G2674 Papaver somniferum HOM05D002065 ORTHO05D002050 1.0e-08 63.2 79 36.7
TWI38G0302 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 1.0e-08 63.2 79 43.0
Migut.M00324 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.3e-08 62.8 72 43.1
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.3e-08 62.8 79 41.8
MD11G1225800 Malus domestica HOM05D002065 ORTHO05D002050 1.3e-08 62.8 80 43.8
SalBow7G4713 Salvia bowleyana HOM05D002065 ORTHO05D002050 1.3e-08 62.8 78 47.4
DCAR_022527 Daucus carota HOM05D002065 ORTHO05D002050 2.3e-08 62.0 79 44.3
Migut.M00328 Erythranthe guttata HOM05D002065 ORTHO05D002050 2.3e-08 62.0 74 40.5
FAN16G0462 Fragaria x ananassa HOM05D002065 ORTHO05D002050 2.3e-08 62.0 81 43.2
THA.LOC104817885 Tarenaya hassleriana HOM05D002065 ORTHO05D002050 2.3e-08 62.0 79 41.8
BcaB04g19117 Brassica carinata HOM05D002065 ORTHO05D002050 3.9e-08 61.2 80 46.2
A03p41840 Brassica napus HOM05D002065 ORTHO05D002050 3.9e-08 61.2 80 46.2
BraA03t13337Z Brassica rapa HOM05D002065 ORTHO05D002050 3.9e-08 61.2 80 46.2
PSO675G1570 Papaver somniferum HOM05D002065 ORTHO05D002050 3.9e-08 61.2 80 36.2
Migut.M00291 Erythranthe guttata HOM05D002065 ORTHO05D002050 5.1e-08 60.8 84 44.0
BcaC01g03546 Brassica carinata HOM05D002065 ORTHO05D002050 6.6e-08 60.5 78 46.2
C03p51220 Brassica napus HOM05D002065 ORTHO05D002050 6.6e-08 60.5 78 46.2
BolC3t17412H Brassica oleracea HOM05D002065 ORTHO05D002050 6.6e-08 60.5 78 46.2
COL.COLO4_09575 Corchorus olitorius HOM05D002065 ORTHO05D002050 6.6e-08 60.5 85 43.5
Eucgr.F00979 Eucalyptus grandis HOM05D002065 ORTHO05D002050 6.6e-08 60.5 79 41.8
Eucgr.F00981 Eucalyptus grandis HOM05D002065 ORTHO05D002050 6.6e-08 60.5 79 41.8
BcaC09g49003 Brassica carinata HOM05D002065 ORTHO05D002050 8.7e-08 60.1 80 47.5
A01p34210 Brassica napus HOM05D002065 ORTHO05D002050 8.7e-08 60.1 80 47.5
C01p43600 Brassica napus HOM05D002065 ORTHO05D002050 8.7e-08 60.1 80 47.5
BolC1t04321H Brassica oleracea HOM05D002065 ORTHO05D002050 8.7e-08 60.1 80 47.5
BraA01t03521Z Brassica rapa HOM05D002065 ORTHO05D002050 8.7e-08 60.1 80 47.5
MELO3C018104.2 Cucumis melo HOM05D002065 ORTHO05D002050 8.7e-08 60.1 79 43.0
FvH4_3g21890 Fragaria vesca HOM05D002065 ORTHO05D002050 8.7e-08 60.1 81 43.2
FAN11G3928 Fragaria x ananassa HOM05D002065 ORTHO05D002050 8.7e-08 60.1 81 43.2
PSO170G3882 Papaver somniferum HOM05D002065 ORTHO05D002050 8.7e-08 60.1 86 39.5
EL10Ac4g07955 Beta vulgaris HOM05D002065 ORTHO05D002050 1.1e-07 59.7 81 37.0
Phvul.005G091900 Phaseolus vulgaris HOM05D002065 ORTHO05D002050 1.1e-07 59.7 82 42.7
PGR083G2635 Punica granatum HOM05D002065 ORTHO05D002050 1.1e-07 59.7 79 43.0
Aa31LG8G7400 Aethionema arabicum HOM05D002065 ORTHO05D002050 1.5e-07 59.3 81 39.5
BcaB04g20643 Brassica carinata HOM05D002065 ORTHO05D002050 1.5e-07 59.3 80 47.5
Cfa020412 Carpinus fangiana HOM05D002065 ORTHO05D002050 1.5e-07 59.3 84 41.7
Migut.M00290 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.5e-07 59.3 84 42.9
Migut.M00327 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.5e-07 59.3 78 39.7
PSO017G0621 Papaver somniferum HOM05D002065 ORTHO05D002050 1.5e-07 59.3 83 41.0
PSO302G0041 Papaver somniferum HOM05D002065 ORTHO05D002050 1.5e-07 59.3 71 40.8
PSO675G4306 Papaver somniferum HOM05D002065 ORTHO05D002050 1.5e-07 59.3 79 39.2
Sabra16G0283800 Salix brachista HOM05D002065 ORTHO05D002050 1.5e-07 59.3 86 44.2
CARHR096380 Cardamine hirsuta HOM05D002065 ORTHO05D002050 2.5e-07 58.5 79 43.0
CiPaw.11G184100 Carya illinoinensis HOM05D002065 ORTHO05D002050 2.5e-07 58.5 81 42.0
Ciclev10009510m.g Citrus clementina HOM05D002065 ORTHO05D002050 2.5e-07 58.5 79 43.0
Prupe.4G204400 Prunus persica HOM05D002065 ORTHO05D002050 2.5e-07 58.5 78 39.7
ClCG05G014750 Citrullus lanatus HOM05D002065 ORTHO05D002050 3.3e-07 58.2 82 42.7
Duzib213G0394 Durio zibethinus HOM05D002065 ORTHO05D002050 3.3e-07 58.2 81 43.2
Duzib170G0757 Durio zibethinus HOM05D002065 ORTHO05D002050 5.6e-07 57.4 81 43.2
Potri.001G418000 Populus trichocarpa HOM05D002065 ORTHO05D002050 5.6e-07 57.4 80 42.5
Gorai.002G082700 Gossypium raimondii HOM05D002065 ORTHO05D002050 7.3e-07 57.0 79 40.5
TWI39G0180 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 7.3e-07 57.0 79 40.5
Migut.M00323 Erythranthe guttata HOM05D002065 ORTHO05D002050 9.6e-07 56.6 78 38.5
Gohir.D01G061300 Gossypium hirsutum HOM05D002065 ORTHO05D002050 9.6e-07 56.6 79 40.5
Lj8P166T75 Lonicera japonica HOM05D002065 ORTHO05D002050 9.6e-07 56.6 79 39.2
PSO675G4979 Papaver somniferum HOM05D002065 ORTHO05D002050 9.6e-07 56.6 77 35.1
QL08p013247 Quercus lobata HOM05D002065 ORTHO05D002050 9.6e-07 56.6 79 41.8
Sp3g18630 Schrenkiella parvula HOM05D002065 ORTHO05D002050 9.6e-07 56.6 85 41.2
Haze_09616 Corylus avellana HOM05D002065 ORTHO05D002050 1.2e-06 56.2 81 42.0
Glyma.13G287500 Glycine max HOM05D002065 ORTHO05D002050 1.2e-06 56.2 81 45.7
MBI18_g44236_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.2e-06 56.2 70 42.9
Lj3g0020040 Lotus japonicus HOM05D002065 ORTHO05D002050 1.6e-06 55.8 81 43.2
Lalb_Chr14g0366161 Lupinus albus HOM05D002065 ORTHO05D002050 1.6e-06 55.8 81 45.7
PSO541G3356 Papaver somniferum HOM05D002065 ORTHO05D002050 1.6e-06 55.8 80 35.0
Prupe.6G166500 Prunus persica HOM05D002065 ORTHO05D002050 1.6e-06 55.8 75 38.7
Thecc.07G052100 Theobroma cacao HOM05D002065 ORTHO05D002050 1.6e-06 55.8 79 40.5
DCAR_022525 Daucus carota HOM05D002065 ORTHO05D002050 2.1e-06 55.5 75 37.3
Actinidia09932 Actinidia chinensis HOM05D002065 ORTHO05D002050 2.8e-06 55.1 76 38.2
AT3G20590 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 3.6e-06 54.7 87 42.5
Carub.0003s2057 Capsella rubella HOM05D002065 ORTHO05D002050 3.6e-06 54.7 88 40.9
CsaV3_3G023120 Cucumis sativus L. HOM05D002065 ORTHO05D002050 3.6e-06 54.7 79 41.8
MD03G1211100 Malus domestica HOM05D002065 ORTHO05D002050 3.6e-06 54.7 80 41.2
Sp3g18610 Schrenkiella parvula HOM05D002065 ORTHO05D002050 3.6e-06 54.7 76 39.5
Aa31LG8G7410 Aethionema arabicum HOM05D002065 ORTHO05D002050 4.7e-06 54.3 83 42.2
AT3G20600 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 4.7e-06 54.3 87 40.2
PSO675G5832 Papaver somniferum HOM05D002065 ORTHO05D002050 4.7e-06 54.3 76 38.2
Thhalv10021500m.g Eutrema salsugineum HOM05D002065 ORTHO05D002050 6.2e-06 53.9 85 38.8
Potri.011G133900 Populus trichocarpa HOM05D002065 ORTHO05D002050 6.2e-06 53.9 81 43.2
Sed0026241 Sechium edule HOM05D002065 ORTHO05D002050 6.2e-06 53.9 84 41.7
AT3G20610 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 8.1e-06 53.5 80 38.8


User provided reference genes

Program Settings