Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 0.0e+00 1161.7 581 100.0
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 9.1e-307 1056.2 584 91.1
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 3.2e-304 1047.7 584 90.4
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 9.4e-304 1046.2 584 90.2
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.1e-299 1032.7 583 90.4
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 2.4e-299 1031.6 585 89.1
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 1.3e-284 982.6 531 92.7
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 5.9e-266 920.6 555 82.9
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 7.8e-266 920.2 586 79.4
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.9e-265 918.3 559 81.8
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 1.1e-264 916.4 559 81.6
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 4.7e-263 911.0 588 77.4
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.3e-262 908.7 558 80.5
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 4.0e-262 907.9 558 80.3
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 6.8e-262 907.1 593 78.4
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 6.8e-262 907.1 553 80.8
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.5e-261 906.0 588 78.6
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 2.2e-260 902.1 557 80.6
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 2.9e-260 901.7 562 78.5
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.9e-260 901.7 589 76.2
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 6.4e-260 900.6 563 79.6
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 1.1e-259 899.8 592 76.9
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 4.1e-259 897.9 559 78.9
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 5.4e-259 897.5 560 78.6
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 7.0e-259 897.1 558 79.4
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 3.5e-258 894.8 591 75.8
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 4.6e-258 894.4 586 76.6
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 5.9e-258 894.0 587 76.3
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 3.9e-257 891.3 586 76.5
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 3.9e-257 891.3 594 75.6
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 5.0e-257 891.0 587 76.0
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 5.0e-257 891.0 592 75.5
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 5.0e-257 891.0 591 76.5
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 6.6e-257 890.6 588 75.9
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.1e-256 889.8 588 75.9
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 1.5e-256 889.4 588 75.7
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 1.9e-256 889.0 587 76.0
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 3.3e-256 888.3 531 82.3
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 3.3e-256 888.3 566 77.6
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 5.6e-256 887.5 579 77.4
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 1.6e-255 885.9 559 78.0
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.6e-255 885.9 565 78.1
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 2.1e-255 885.6 566 77.7
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 3.6e-255 884.8 563 78.2
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.6e-255 884.8 588 75.3
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 3.6e-255 884.8 566 77.4
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.7e-255 884.4 593 75.2
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 2.3e-254 882.1 589 74.4
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 5.2e-254 880.9 564 78.0
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 8.9e-254 880.2 697 67.4
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 1.2e-253 879.8 586 75.8
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 2.0e-253 879.0 534 81.3
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 2.0e-253 879.0 572 75.9
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 2.6e-253 878.6 534 81.1
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 4.4e-253 877.9 534 81.1
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 7.5e-253 877.1 538 80.9
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 9.8e-253 876.7 555 78.0
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 1.7e-252 875.9 538 79.9
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 6.4e-252 874.0 628 71.3
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 6.4e-252 874.0 564 77.5
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 1.1e-251 873.2 586 75.6
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 1.4e-251 872.8 535 80.9
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 2.4e-251 872.1 534 80.7
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 2.0e-250 869.0 557 76.8
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.5e-250 868.2 580 74.7
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 4.6e-250 867.8 596 73.2
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 4.6e-250 867.8 559 76.6
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 6.0e-250 867.5 596 72.8
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 6.0e-250 867.5 521 82.5
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 3.0e-249 865.1 568 73.9
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 5.0e-249 864.4 571 74.8
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 5.0e-249 864.4 596 72.1
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 8.6e-249 863.6 551 77.1
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 1.1e-248 863.2 583 74.1
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 3.3e-248 861.7 596 71.8
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 4.3e-248 861.3 571 74.4
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 5.6e-248 860.9 571 74.1
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 2.1e-247 859.0 558 76.2
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 2.1e-247 859.0 557 76.5
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 4.7e-247 857.8 555 75.3
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 1.1e-246 856.7 598 71.4
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.4e-246 856.3 568 73.4
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 3.1e-246 855.1 598 71.4
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 3.1e-246 855.1 560 76.2
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 4.0e-246 854.7 568 73.2
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 4.0e-246 854.7 555 74.8
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.2e-245 853.2 533 78.4
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 1.5e-245 852.8 598 71.2
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 4.9e-244 847.8 554 74.0
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 2.1e-242 842.4 582 72.7
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 7.8e-234 813.9 582 71.5
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 1.7e-233 812.8 560 74.3
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 5.1e-233 811.2 554 73.3
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 2.8e-231 805.4 571 69.9
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 1.1e-230 803.5 555 71.7
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 2.0e-229 799.3 479 82.0
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 5.8e-229 797.7 554 71.7
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 2.3e-225 785.8 563 69.4
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 3.1e-222 775.4 481 79.6
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 7.6e-221 770.8 502 77.9
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 4.9e-220 768.1 531 72.5
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.2e-218 763.5 481 77.5
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.6e-215 753.1 512 74.6
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 6.2e-215 751.1 452 82.5
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 3.8e-212 741.9 478 77.6
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 4.2e-211 738.4 548 68.6
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 3.5e-210 735.3 456 80.3
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 1.6e-199 699.9 553 64.2
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 7.4e-192 674.5 562 60.9
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 1.9e-187 659.8 475 71.2
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 1.7e-172 610.1 559 59.9
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 5.5e-163 578.6 543 56.4
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 8.0e-162 574.7 580 52.4
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 4.3e-147 525.8 460 57.0
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 8.3e-143 511.5 512 52.5
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 6.2e-138 495.4 345 73.0
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 4.2e-118 429.5 258 81.8
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 4.5e-80 303.1 267 57.3
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.2e-74 284.3 158 86.7
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 2.0e-48 198.0 511 29.7
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 1.6e-32 145.2 221 43.4
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 3.5e-32 144.1 90 76.7
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 8.3e-26 122.9 560 24.3
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 3.6e-21 107.5 65 76.9
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.4e-20 105.5 102 52.9
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.5e-19 102.1 82 61.0
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 3.5e-08 64.3 30 96.7


User provided reference genes

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