Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018599g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 6.4e-61 237.3 123 100.0
Nitab4.5_0003371g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.6e-56 221.5 123 93.5
Nitab4.5_0000188g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 4.7e-56 221.1 123 94.3
Nitab4.5_0000235g0150 Nicotiana tabacum HOM05D011531 ORTHO05D012843 9.3e-52 206.8 123 88.6
Nitab4.5_0004435g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 2.3e-50 202.2 123 85.4
Nitab4.5_0000235g0160 Nicotiana tabacum HOM05D011531 ORTHO05D012843 6.6e-50 200.7 123 86.2
Nitab4.5_0001223g0060 Nicotiana tabacum HOM05D011531 ORTHO05D012843 8.1e-48 193.7 123 80.5
Nitab4.5_0009492g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 2.4e-31 139.0 113 64.6
CAN.G424.67 Capsicum annuum HOM05D011531 ORTHO05D012843 3.0e-26 122.1 123 60.2
PGSC0003DMG400013878 Solanum tuberosum HOM05D011531 ORTHO05D012843 3.1e-23 112.1 84 67.9
PGSC0003DMG400045733 Solanum tuberosum HOM05D011531 ORTHO05D012843 7.6e-22 107.5 118 56.8
Nitab4.5_0009438g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 2.7e-19 99.0 60 76.7
Sopen02g024380 Solanum pennellii HOM05D011531 ORTHO05D012843 3.6e-19 98.6 118 53.4
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 9.1e-15 84.0 108 45.4
PGSC0003DMG400022338 Solanum tuberosum HOM05D011531 ORTHO05D012843 9.1e-15 84.0 64 64.1
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 1.2e-11 73.6 124 41.1
Peaxi162Scf00610g00115 Petunia axillaris HOM05D000519 ORTHO05D000959 2.1e-11 72.8 97 43.3
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 4.7e-11 71.6 83 44.6
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 6.1e-11 71.2 97 43.3
Sopen10g033250 Solanum pennellii HOM05D011531 ORTHO05D393179 6.1e-11 71.2 122 35.2
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 1.8e-10 69.7 122 39.3
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 2.3e-10 69.3 122 39.3
Nitab4.5_0005135g0030 Nicotiana tabacum HOM05D000519 ORTHO05D000959 5.1e-10 68.2 97 45.4
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 5.1e-10 68.2 122 38.5
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 5.1e-10 68.2 122 39.3
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 6.7e-10 67.8 122 38.5
Nitab4.5_0000132g0460 Nicotiana tabacum HOM05D011531 ORTHO05D000959 4.4e-09 65.1 119 37.8
SalBow8G0429 Salvia bowleyana HOM05D000519 ORTHO05D000959 5.7e-09 64.7 125 36.0
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 9.7e-09 63.9 101 38.6
Nitab4.5_0003626g0060 Nicotiana tabacum HOM05D015638 ORTHO05D016886 9.7e-09 63.9 125 34.4
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 2.2e-08 62.8 116 36.2
Nitab4.5_0007568g0010 Nicotiana tabacum HOM05D015638 ORTHO05D016886 2.2e-08 62.8 138 34.1
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 2.2e-08 62.8 99 41.4
Nitab4.5_0000143g0140 Nicotiana tabacum HOM05D000519 ORTHO05D016886 2.8e-08 62.4 126 34.9
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.7e-08 62.0 98 40.8
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.7e-08 62.0 98 40.8
AL7G38460 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 4.8e-08 61.6 97 37.1
Ciclev10009506m.g Citrus clementina HOM05D000519 ORTHO05D000959 4.8e-08 61.6 110 33.6
Medtr4g095630 Medicago truncatula HOM05D000519 ORTHO05D000959 6.3e-08 61.2 96 38.5
CAN.G1529.1 Capsicum annuum HOM05D000519 ORTHO05D000959 8.2e-08 60.8 99 38.4
CAN.G5949.1 Capsicum annuum HOM05D000519 ORTHO05D000959 8.2e-08 60.8 124 36.3
HanXRQChr17g0559581 Helianthus annuus HOM05D000519 ORTHO05D000959 8.2e-08 60.8 89 40.4
AT4G16500 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 1.1e-07 60.5 101 38.6
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 1.1e-07 60.5 109 35.8
TPR.G21872 Trifolium pratense HOM05D000519 ORTHO05D000959 1.1e-07 60.5 108 34.3
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 1.4e-07 60.1 88 42.0
TPR.G5977 Trifolium pratense HOM05D000519 ORTHO05D000959 1.8e-07 59.7 78 42.3
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 2.4e-07 59.3 91 39.6
THA.LOC104821295 Tarenaya hassleriana HOM05D003002 ORTHO05D000959 2.4e-07 59.3 78 41.0
TPR.G5936 Trifolium pratense HOM05D000919 ORTHO05D001187 2.4e-07 59.3 78 42.3
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 3.1e-07 58.9 122 35.2
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 4.1e-07 58.5 74 41.9
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 4.1e-07 58.5 74 41.9
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 5.3e-07 58.2 74 41.9
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 5.3e-07 58.2 74 41.9
ClCG01G010440 Citrullus lanatus HOM05D000519 ORTHO05D000959 5.3e-07 58.2 97 34.0
ClCG01G010530 Citrullus lanatus HOM05D000519 ORTHO05D000959 5.3e-07 58.2 87 34.5
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 7.0e-07 57.8 84 36.9
ClCG01G010470 Citrullus lanatus HOM05D000519 ORTHO05D000959 9.1e-07 57.4 98 32.7
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 9.1e-07 57.4 116 34.5
SalBow8G3278 Salvia bowleyana HOM05D000519 ORTHO05D000959 9.1e-07 57.4 126 37.3
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 9.1e-07 57.4 99 36.4
Thecc.03G313400 Theobroma cacao HOM05D000519 ORTHO05D000959 9.1e-07 57.4 110 35.5
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 9.1e-07 57.4 121 38.0
TPR.G35340 Trifolium pratense HOM05D000519 ORTHO05D000959 9.1e-07 57.4 68 44.1
CSS0049006 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 1.2e-06 57.0 122 32.8
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 1.2e-06 57.0 115 34.8
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.2e-06 57.0 92 41.3
HPP92_024487 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.2e-06 57.0 74 47.3
ClCG01G010520 Citrullus lanatus HOM05D000519 ORTHO05D000959 1.5e-06 56.6 87 33.3
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 1.5e-06 56.6 84 36.9
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 2.0e-06 56.2 115 33.9
MELO3C025554.2 Cucumis melo HOM05D000519 ORTHO05D000959 2.6e-06 55.8 111 35.1
Lalb_Chr15g0088031 Lupinus albus HOM05D000519 ORTHO05D000959 2.6e-06 55.8 108 36.1
Peaxi162Scf00924g00021 Petunia axillaris HOM05D000519 ORTHO05D000959 2.6e-06 55.8 92 42.4
TPR.G21870 Trifolium pratense HOM05D000519 ORTHO05D000959 2.6e-06 55.8 68 42.6
HPP92_024483 Vanilla planifolia HOM05D000519 ORTHO05D000959 2.6e-06 55.8 73 43.8
arahy.Tifrunner.gnm1.ann1.QX2NVJ Arachis hypogaea HOM05D000519 ORTHO05D000959 3.4e-06 55.5 86 38.4
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 3.4e-06 55.5 110 35.5
ClCG01G010490 Citrullus lanatus HOM05D000519 ORTHO05D000959 3.4e-06 55.5 98 30.6
Gohir.A06G154100 Gossypium hirsutum HOM05D000519 ORTHO05D000959 3.4e-06 55.5 103 40.8
THA.LOC104817839 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 3.4e-06 55.5 61 49.2
TPR.G33246 Trifolium pratense HOM05D000519 ORTHO05D000959 3.4e-06 55.5 68 39.7
Duzib192G0996 Durio zibethinus HOM05D000519 ORTHO05D000959 4.5e-06 55.1 96 39.6
Psat4g004160 Pisum sativum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 84 34.5
Potri.006G014500 Populus trichocarpa HOM05D000519 ORTHO05D000959 4.5e-06 55.1 110 35.5
CAN.G1263.18 Capsicum annuum HOM05D000519 ORTHO05D000959 5.9e-06 54.7 85 38.8
AUR62012807 Chenopodium quinoa HOM05D000519 ORTHO05D000959 5.9e-06 54.7 91 37.4
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 5.9e-06 54.7 103 37.9
PGSC0003DMG400008460 Solanum tuberosum HOM05D000519 ORTHO05D000959 5.9e-06 54.7 102 39.2
Aa31LG9G7070 Aethionema arabicum HOM05D000519 ORTHO05D000959 7.7e-06 54.3 91 42.9
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 7.7e-06 54.3 88 35.2
Ca_00730_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 7.7e-06 54.3 97 38.1
CsaV3_1G017120 Cucumis sativus L. HOM05D000519 ORTHO05D000959 7.7e-06 54.3 96 32.3


User provided reference genes

Program Settings