Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.2e-44 183.0 107 100.0
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 3.1e-35 151.8 103 81.6
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.8e-27 125.9 106 71.7
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 3.1e-27 125.2 106 71.7
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 1.2e-26 123.2 106 69.8
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 1.5e-26 122.9 105 66.7
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 2.2e-25 119.0 106 68.9
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.3e-20 103.2 101 60.4
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.1e-16 90.1 102 52.0
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 5.1e-14 81.3 102 52.0
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 6.7e-14 80.9 102 47.1
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.1e-13 80.1 101 52.5
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.3e-12 76.6 103 55.3
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 8.2e-12 73.9 107 50.5
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 1.8e-11 72.8 102 42.2
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 2.4e-11 72.4 104 50.0
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 5.3e-11 71.2 105 50.5
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 6.9e-11 70.9 101 45.5
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 1.2e-10 70.1 67 52.2
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 5.8e-10 67.8 107 43.9
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 5.8e-10 67.8 105 43.8
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 1.0e-09 67.0 101 40.6
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 2.2e-09 65.9 103 41.7
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 2.9e-09 65.5 100 43.0
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 6.5e-09 64.3 63 47.6
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 2.5e-08 62.4 54 66.7
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 2.5e-08 62.4 88 40.9
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 5.5e-08 61.2 101 41.6
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 7.1e-08 60.8 74 47.3
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 9.3e-08 60.5 72 47.2
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 9.3e-08 60.5 47 72.3
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 1.6e-07 59.7 54 63.0
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 1.6e-07 59.7 64 53.1
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 2.1e-07 59.3 101 44.6
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 2.7e-07 58.9 100 45.0
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 3.5e-07 58.5 54 61.1
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 1.8e-06 56.2 49 61.2
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.8e-06 56.2 46 58.7
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.8e-06 56.2 46 58.7
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.8e-06 56.2 46 58.7
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 2.3e-06 55.8 74 45.9
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.3e-06 55.8 74 45.9
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.3e-06 55.8 74 45.9
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 2.3e-06 55.8 50 56.0
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 3.9e-06 55.1 74 44.6
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 5.1e-06 54.7 106 38.7
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 6.7e-06 54.3 50 52.0
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 6.7e-06 54.3 60 53.3
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 6.7e-06 54.3 60 53.3
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 8.7e-06 53.9 74 44.6
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 8.7e-06 53.9 73 43.8
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 8.7e-06 53.9 47 63.8


User provided reference genes

Program Settings