Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0018109g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.8e-110 402.5 195 100.0
Solyc00g500107.1 Solanum lycopersicum HOM05D008690 ORTHO05D010874 6.0e-21 105.1 76 75.0
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 5.6e-19 98.6 52 92.3
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 5.6e-19 98.6 52 92.3
ClCG10G004700 Citrullus lanatus HOM05D008690 ORTHO05D010874 1.6e-18 97.1 52 92.3
CsaV3_6G018430 Cucumis sativus L. HOM05D008690 ORTHO05D010874 2.4e-14 83.2 52 82.7
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 2.1e-13 80.1 36 97.2
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 4.6e-13 79.0 36 97.2
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.6e-13 79.0 38 89.5
Nn6g32819 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.3e-12 77.4 36 94.4
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 2.3e-12 76.6 93 51.6
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 2.3e-12 76.6 36 91.7
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.0e-12 76.3 36 94.4
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 3.9e-12 75.9 35 97.1
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 5.1e-12 75.5 33 100.0
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 8.7e-12 74.7 38 89.5
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 1.5e-11 73.9 34 97.1
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.5e-11 73.9 36 91.7
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 2.5e-11 73.2 38 86.8
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 3.3e-11 72.8 89 49.4
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 3.3e-11 72.8 89 49.4
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 3.3e-11 72.8 89 49.4
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 3.3e-11 72.8 36 94.4
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.3e-11 72.8 36 94.4
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.3e-11 72.8 36 94.4
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.3e-11 72.8 36 94.4
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.3e-11 72.8 36 94.4
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 3.3e-11 72.8 36 91.7
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.3e-10 70.9 38 84.2
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 2.1e-10 70.1 34 94.1
Nn1g00555 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.1e-10 70.1 36 86.1
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 2.8e-10 69.7 35 88.6
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 3.7e-10 69.3 50 72.0
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 8.2e-10 68.2 36 86.1
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.1e-09 67.8 33 93.9
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.4e-09 67.4 58 60.3
Sopen03g036740 Solanum pennellii HOM05D001966 ORTHO05D010127 1.4e-09 67.4 36 83.3
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 3.1e-09 66.2 67 59.7
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 3.1e-09 66.2 53 66.0
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 1.5e-08 63.9 35 82.9
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 2.0e-08 63.5 38 73.7
Glyma.20G027700 Glycine max HOM05D001966 ORTHO05D010127 2.2e-07 60.1 69 50.7
DCAR_007750 Daucus carota HOM05D000444 ORTHO05D000489 4.9e-07 58.9 26 96.2
Gohir.A05G327708 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.9e-07 58.9 27 96.3
Gohir.D11G306003 Gossypium hirsutum HOM05D001966 ORTHO05D010127 6.5e-07 58.5 36 83.3
Phvul.008G246600 Phaseolus vulgaris HOM05D001966 ORTHO05D010127 6.5e-07 58.5 45 66.7
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 8.4e-07 58.2 30 83.3
Gorai.007G326200 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.1e-06 57.8 36 80.6
Gorai.011G180000 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.1e-06 57.8 36 77.8


User provided reference genes

Program Settings