Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 6.7e-151 537.3 277 100.0
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 4.3e-97 358.6 264 74.6
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.3e-85 320.5 243 74.5
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.7e-82 310.1 239 71.1
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 6.6e-82 308.1 245 70.6
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 6.4e-77 291.6 238 70.2
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 2.0e-38 163.7 258 45.3
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 1.2e-30 137.9 233 42.5
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 4.0e-26 122.9 229 41.0
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 6.3e-24 115.5 218 37.6
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 8.3e-24 115.2 239 39.7
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.4e-23 114.4 247 39.3
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 2.0e-22 110.5 252 36.9
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 5.9e-22 109.0 240 39.2
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 8.5e-21 105.1 244 36.5
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 2.5e-20 103.6 208 40.4
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 5.5e-20 102.4 245 36.7
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 7.2e-20 102.1 243 37.0
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 9.5e-20 101.7 237 36.7
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 2.8e-19 100.1 258 34.5
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 3.6e-19 99.8 267 35.2
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 6.1e-19 99.0 241 36.9
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 1.0e-18 98.2 259 37.1
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 5.2e-18 95.9 253 34.8
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 6.8e-18 95.5 246 33.7
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 8.8e-18 95.1 249 34.1
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 8.8e-18 95.1 244 35.7
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 1.2e-17 94.7 244 34.8
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 2.6e-17 93.6 259 32.0
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 1.3e-16 91.3 238 32.8
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.3e-16 91.3 244 34.8
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.7e-16 90.9 253 35.2
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 3.7e-16 89.7 229 34.1
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 6.3e-16 89.0 212 35.8
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 1.1e-15 88.2 239 33.9
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 1.8e-15 87.4 246 32.5
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.4e-15 87.0 232 35.8
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 4.1e-15 86.3 237 31.2
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 5.4e-15 85.9 246 31.7
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 7.0e-15 85.5 252 33.3
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.0e-15 85.5 250 30.4
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 7.0e-15 85.5 246 30.9
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 9.2e-15 85.1 234 32.5
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 2.0e-14 84.0 209 38.3
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 2.7e-14 83.6 231 35.1
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 2.7e-14 83.6 247 31.2
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 3.5e-14 83.2 227 35.2
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 4.5e-14 82.8 242 32.6
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 5.9e-14 82.4 250 30.0
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 1.3e-13 81.3 228 33.8
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.3e-13 81.3 284 31.7
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 1.3e-13 81.3 248 32.3
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.9e-13 80.1 250 29.6
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 6.6e-13 79.0 239 32.6
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 6.6e-13 79.0 266 31.2
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 6.6e-13 79.0 247 32.8
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 8.6e-13 78.6 235 31.1
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 1.1e-12 78.2 232 34.1
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 7.3e-12 75.5 356 27.2
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 1.2e-11 74.7 282 28.0
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.8e-11 73.6 215 29.8
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 3.6e-11 73.2 243 31.3
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.0e-10 71.6 244 29.9
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.0e-10 71.6 210 32.9
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.0e-10 71.6 227 31.3
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 6.8e-10 68.9 241 31.1
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 8.9e-10 68.6 130 37.7
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 1.5e-09 67.8 225 30.7
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 5.7e-09 65.9 216 32.4
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 7.5e-09 65.5 265 29.4
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 9.8e-09 65.1 250 28.8
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 1.7e-08 64.3 221 33.0
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 2.9e-08 63.5 235 30.2
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 1.1e-07 61.6 99 41.4
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 1.4e-07 61.2 262 29.0
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 1.6e-06 57.8 276 28.3
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 2.0e-06 57.4 252 28.6
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 5.9e-06 55.8 233 26.6
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 7.8e-06 55.5 201 27.9


User provided reference genes

Program Settings