Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 8.5e-72 273.5 130 100.0
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 2.0e-36 156.0 101 77.2
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 2.0e-36 156.0 101 77.2
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.8e-36 154.5 101 76.2
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.8e-36 154.5 101 76.2
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.8e-36 154.5 101 76.2
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.8e-36 154.5 101 76.2
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 5.8e-36 154.5 101 76.2
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 1.7e-35 152.9 101 76.2
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 1.7e-35 152.9 101 76.2
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 1.7e-35 152.9 101 76.2
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 1.9e-34 149.4 101 73.3
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 4.1e-34 148.3 102 72.5
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 7.0e-34 147.5 110 69.1
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 9.2e-34 147.1 101 73.3
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.1e-33 146.0 101 72.3
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 3.5e-33 145.2 101 72.3
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 2.3e-32 142.5 101 71.3
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-32 142.5 101 71.3
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-32 142.5 101 71.3
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-32 142.5 101 71.3
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-32 142.5 101 71.3
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-32 142.5 101 71.3
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-32 142.5 101 71.3
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 3.0e-32 142.1 109 66.1
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.9e-32 141.7 77 87.0
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 6.6e-32 141.0 85 76.5
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 6.6e-32 141.0 81 81.5
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 6.6e-32 141.0 101 69.3
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 6.6e-32 141.0 108 67.6
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 6.6e-32 141.0 108 67.6
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 1.1e-31 140.2 101 68.3
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 1.1e-31 140.2 101 68.3
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.5e-31 139.8 97 71.1
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 1.5e-31 139.8 103 68.9
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 2.5e-31 139.0 101 68.3
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 5.6e-31 137.9 97 70.1
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 2.1e-30 136.0 72 90.3
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.1e-30 136.0 97 70.1
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 2.1e-30 136.0 97 70.1
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 2.8e-30 135.6 108 65.7
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 3.6e-30 135.2 85 77.6
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 4.7e-30 134.8 108 64.8
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 3.1e-29 132.1 101 66.3
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 3.1e-29 132.1 101 68.3
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 3.1e-29 132.1 101 68.3
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 6.8e-29 131.0 101 65.3
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 6.8e-29 131.0 75 81.3
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 8.9e-29 130.6 101 66.3
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 1.5e-28 129.8 101 64.4
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 2.0e-28 129.4 101 64.4
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 2.0e-28 129.4 85 74.1
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.6e-28 129.0 81 79.0
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 7.5e-28 127.5 101 64.4
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 9.9e-28 127.1 101 62.4
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 3.7e-27 125.2 101 63.4
BolC2t10599H Brassica oleracea HOM05D000533 ORTHO05D002807 8.6e-24 114.0 90 64.4
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 1.9e-23 112.8 69 84.1
Medtr4g451555 Medicago truncatula HOM05D000533 ORTHO05D002807 9.5e-23 110.5 77 72.7
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 4.7e-22 108.2 65 78.5
Lsat_1_v5_gn_5_174020 Lactuca sativa HOM05D000533 ORTHO05D002807 4.7e-22 108.2 72 70.8
Lalb_Chr07g0191801 Lupinus albus HOM05D000533 ORTHO05D002807 1.4e-21 106.7 85 68.2
arahy.Tifrunner.gnm1.ann1.F0S3GF Arachis hypogaea HOM05D000533 ORTHO05D002807 1.8e-21 106.3 85 65.9
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 4.0e-21 105.1 72 72.2
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 1.2e-20 103.6 61 80.3
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 2.0e-20 102.8 69 78.3
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-20 102.8 69 78.3
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 2.6e-20 102.4 97 59.8
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 7.6e-20 100.9 101 54.5
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 1.1e-18 97.1 53 88.7
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 1.6e-17 93.2 101 51.5
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 2.1e-17 92.8 57 78.9
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.5e-17 92.0 52 82.7
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 1.3e-16 90.1 101 48.5
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 2.5e-15 85.9 106 49.1
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 7.3e-15 84.3 108 48.1
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 1.3e-14 83.6 45 82.2
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 6.2e-14 81.3 112 43.8
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 8.1e-14 80.9 105 45.7
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 9.0e-13 77.4 61 62.3
Nitab4.5_0001783g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-12 77.0 68 60.3
CSS0023353 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D006151 7.6e-12 74.3 95 45.3
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 2.4e-10 69.3 57 52.6
Duzib093G2216 Durio zibethinus HOM05D000533 ORTHO05D002807 4.2e-10 68.6 96 45.8
Solyc02g011790.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.2e-09 67.0 75 50.7
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 1.1e-07 60.5 59 55.9
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 1.1e-07 60.5 44 63.6
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 1.1e-07 60.5 44 63.6
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 1.1e-07 60.5 44 63.6
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 1.1e-07 60.5 44 63.6
EL10Ac6g13955 Beta vulgaris HOM05D000533 ORTHO05D002807 1.3e-06 57.0 28 89.3
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 8.1e-06 54.3 51 58.8


User provided reference genes

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