Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 4.2e-46 188.3 153 100.0
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 1.7e-34 149.8 77 96.1
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 5.0e-23 111.7 78 76.9
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 2.5e-22 109.4 77 76.6
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 7.3e-22 107.8 162 61.1
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 6.2e-21 104.8 77 76.6
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 7.3e-14 81.3 62 69.4
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 1.6e-13 80.1 55 70.9
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 2.1e-13 79.7 62 64.5
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 2.8e-13 79.3 78 56.4
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 6.2e-13 78.2 63 63.5
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 6.2e-13 78.2 58 69.0
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 6.2e-13 78.2 66 65.2
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 8.1e-13 77.8 79 58.2
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 8.1e-13 77.8 68 58.8
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 1.1e-12 77.4 73 56.2
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 1.4e-12 77.0 60 65.0
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.4e-12 77.0 65 63.1
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 1.4e-12 77.0 76 57.9
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 1.8e-12 76.6 45 77.8
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 2.3e-12 76.3 70 54.3
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 3.1e-12 75.9 70 61.4
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 4.0e-12 75.5 67 58.2
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 4.0e-12 75.5 76 57.9
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 4.0e-12 75.5 76 57.9
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 4.0e-12 75.5 78 51.3
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 4.0e-12 75.5 64 62.5
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 5.2e-12 75.1 73 54.8
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 5.2e-12 75.1 73 52.1
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 5.2e-12 75.1 77 53.2
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 6.8e-12 74.7 78 53.8
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 8.9e-12 74.3 56 69.6
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 8.9e-12 74.3 77 53.2
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 8.9e-12 74.3 75 54.7
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 8.9e-12 74.3 77 58.4
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.2e-11 73.9 70 60.0
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.2e-11 73.9 63 60.3
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.2e-11 73.9 63 60.3
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.2e-11 73.9 63 60.3
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 1.2e-11 73.9 76 55.3
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 1.5e-11 73.6 56 69.6
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 2.0e-11 73.2 72 55.6
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 4.4e-11 72.0 76 48.7
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 4.4e-11 72.0 66 60.6
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 5.8e-11 71.6 93 49.5
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 1.3e-10 70.5 76 59.2
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.7e-10 70.1 61 62.3
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 2.2e-10 69.7 73 57.5
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 2.9e-10 69.3 80 58.8
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 2.9e-10 69.3 53 58.5
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 2.9e-10 69.3 79 50.6
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 4.9e-10 68.6 77 54.5
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 6.4e-10 68.2 60 60.0
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 6.4e-10 68.2 79 53.2
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 6.4e-10 68.2 74 58.1
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 1.4e-09 67.0 54 55.6
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 2.4e-09 66.2 68 57.4
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 4.1e-09 65.5 61 57.4
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 7.1e-09 64.7 76 53.9
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 9.2e-09 64.3 67 55.2
Sabra07G0097600 Salix brachista HOM05D007783 ORTHO05D009740 1.6e-08 63.5 64 59.4
THA.LOC104802538 Tarenaya hassleriana HOM05D007783 ORTHO05D009740 2.1e-08 63.2 45 68.9
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 3.5e-08 62.4 44 65.9
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 3.5e-08 62.4 69 56.5
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 6.0e-08 61.6 67 56.7
Psat5g265520 Pisum sativum HOM05D007783 ORTHO05D009740 6.0e-08 61.6 54 57.4
ECA246G5319 Erigeron canadensis HOM05D007783 ORTHO05D009740 1.7e-07 60.1 70 44.3
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 3.0e-07 59.3 63 55.6
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 3.0e-07 59.3 65 52.3
CDE05G0218 Ceratophyllum demersum HOM05D007783 ORTHO05D009740 3.9e-07 58.9 67 49.3
Sp3g19900 Schrenkiella parvula HOM05D007783 ORTHO05D009740 6.6e-07 58.2 48 58.3
PSO210G2314 Papaver somniferum HOM05D007783 ORTHO05D009740 4.3e-06 55.5 78 43.6
SGA_v2.0_scaffold49G18329 Striga asiatica HOM05D007783 ORTHO05D009740 4.3e-06 55.5 63 50.8
C05p41370 Brassica napus HOM05D007783 ORTHO05D009740 5.6e-06 55.1 77 46.8
Carub.0003s2223 Capsella rubella HOM05D007783 ORTHO05D009740 9.6e-06 54.3 93 40.9


User provided reference genes

Program Settings