Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.1e-110 403.3 194 100.0
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.1e-78 295.0 193 76.2
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 3.5e-77 292.0 193 75.1
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 5.5e-75 284.6 191 75.9
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.6e-74 283.1 196 75.5
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 2.3e-73 279.3 196 75.0
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.6e-69 266.5 196 70.9
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.3e-68 263.5 198 71.7
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.2e-68 262.7 185 75.1
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.0e-65 253.8 195 69.7
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 3.5e-61 238.8 194 68.0
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 1.2e-58 230.3 194 63.4
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.4e-54 216.9 195 61.5
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 1.9e-51 206.5 186 64.0
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 9.5e-51 204.1 179 60.9
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 6.8e-49 198.0 191 60.2
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 6.8e-49 198.0 192 55.2
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 8.9e-49 197.6 186 61.3
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.3e-47 191.0 192 55.7
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.8e-46 189.9 190 54.7
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 2.4e-46 189.5 192 54.2
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 3.5e-45 185.7 194 53.6
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.0e-44 184.1 190 53.2
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.7e-44 183.3 195 52.3
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.3e-44 183.0 193 54.9
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 8.6e-44 181.0 189 52.4
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 8.6e-44 181.0 189 52.9
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 4.3e-43 178.7 183 54.1
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 4.3e-43 178.7 189 55.6
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 5.6e-43 178.3 193 51.3
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 1.6e-42 176.8 188 53.7
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.8e-41 173.3 210 49.0
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 4.4e-40 168.7 196 52.6
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 4.4e-40 168.7 199 50.8
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 7.5e-40 167.9 192 52.6
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 9.8e-40 167.5 208 50.5
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.7e-39 166.8 196 51.5
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 3.7e-39 165.6 195 49.2
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 1.9e-38 163.3 198 48.0
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 2.4e-38 162.9 198 48.0
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 3.2e-38 162.5 191 50.3
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 5.4e-38 161.8 190 49.5
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 5.4e-38 161.8 195 51.8
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 9.2e-38 161.0 188 49.5
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 9.2e-38 161.0 206 44.2
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.0e-37 159.8 194 47.4
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 3.5e-37 159.1 199 49.7
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 6.0e-37 158.3 200 44.5
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 7.8e-37 157.9 196 48.0
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.3e-36 157.1 197 48.2
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 2.3e-36 156.4 189 47.6
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 2.3e-36 156.4 196 47.4
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 3.0e-36 156.0 190 46.3
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 3.9e-36 155.6 191 50.8
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.0e-36 155.2 190 47.4
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.0e-36 155.2 196 48.0
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 5.0e-36 155.2 191 48.2
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.6e-36 154.5 189 47.1
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 8.6e-36 154.5 199 47.7
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.1e-35 154.1 189 51.3
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 1.5e-35 153.7 188 47.9
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 1.5e-35 153.7 189 51.3
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.9e-35 153.3 192 47.9
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 3.3e-35 152.5 193 46.6
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 4.3e-35 152.1 195 46.2
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 2.8e-34 149.4 186 47.8
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 1.1e-33 147.5 191 44.5
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.8e-33 146.7 198 46.0
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 1.8e-33 146.7 196 45.4
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 2.3e-33 146.4 190 43.2
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 3.1e-33 146.0 193 42.0
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 5.2e-33 145.2 197 43.7
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 5.2e-33 145.2 201 43.8
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.8e-33 144.8 189 45.5
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 6.8e-33 144.8 192 45.8
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.9e-33 144.4 188 42.6
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 8.9e-33 144.4 190 42.6
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 8.9e-33 144.4 189 45.0
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 1.5e-32 143.7 190 42.1
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.0e-32 143.3 193 41.5
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 2.0e-32 143.3 190 43.2
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 2.0e-32 143.3 200 46.0
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 3.4e-32 142.5 187 44.9
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 4.4e-32 142.1 189 43.4
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.8e-32 141.7 191 44.5
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 7.5e-32 141.4 185 43.8
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 7.5e-32 141.4 194 41.8
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 7.5e-32 141.4 193 40.9
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 7.5e-32 141.4 191 41.4
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 7.5e-32 141.4 191 41.4
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 7.5e-32 141.4 193 40.9
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 9.8e-32 141.0 191 40.8
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 9.8e-32 141.0 191 40.8
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 9.8e-32 141.0 192 45.3
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.3e-31 140.6 186 44.6
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-31 140.2 190 45.3
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 2.9e-31 139.4 191 46.1
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.9e-31 138.7 189 41.8
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 8.3e-31 137.9 188 45.2
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 1.4e-30 137.1 184 47.8
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.4e-30 137.1 193 45.6
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.4e-30 137.1 193 45.6
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 1.4e-30 137.1 192 45.3
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 1.9e-30 136.7 191 40.3
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.9e-30 136.7 183 43.7
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 2.4e-30 136.3 192 45.8
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 2.4e-30 136.3 198 42.4
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.4e-30 136.3 198 42.4
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.4e-30 136.3 198 42.4
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.2e-30 136.0 193 43.0
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 4.1e-30 135.6 191 40.3
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 4.1e-30 135.6 189 44.4
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 4.1e-30 135.6 200 43.5
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 1.2e-29 134.0 170 50.0
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 2.1e-29 133.3 292 31.5
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 2.1e-29 133.3 192 40.1
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.1e-29 133.3 204 43.6
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.7e-29 132.9 198 42.4
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 2.7e-29 132.9 193 42.0
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.0e-28 131.0 192 39.1
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.3e-28 129.8 198 41.9
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-28 129.4 189 40.7
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 1.1e-27 127.5 189 40.2
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.1e-27 127.5 188 43.1
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.5e-27 126.3 191 37.7
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-26 124.0 193 40.4
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 2.1e-26 123.2 194 44.8
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 8.1e-26 121.3 192 39.1
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 3.1e-25 119.4 189 41.8
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.2e-24 117.5 190 35.8
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 1.5e-24 117.1 185 41.6
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 2.0e-24 116.7 192 38.5
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 2.6e-24 116.3 190 35.8
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 4.4e-24 115.5 185 35.7
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 4.4e-24 115.5 198 41.9
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 5.8e-24 115.2 181 40.9
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.6e-24 114.8 171 42.7
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.7e-23 113.6 192 35.9
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.7e-23 113.6 192 36.5
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.7e-23 113.6 193 35.8
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.4e-22 110.5 193 35.2
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.4e-22 110.5 193 35.2
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.4e-22 110.5 193 35.2
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 9.2e-22 107.8 164 41.5
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.7e-20 103.6 189 38.1
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 2.3e-20 103.2 189 37.6
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.6e-20 101.7 151 41.7
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-19 100.1 173 38.7
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 7.3e-19 98.2 150 44.0
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.2e-18 95.1 158 40.5
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.1e-18 94.7 187 36.4
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 2.6e-16 89.7 181 37.0
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 4.4e-16 89.0 178 34.8
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.6e-16 88.2 131 37.4
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.6e-16 88.2 106 42.5
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.7e-15 87.0 189 32.8
CAN.G69.6 Capsicum annuum HOM05D003790 ORTHO05D004481 3.8e-15 85.9 81 63.0
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 4.9e-15 85.5 232 33.2
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 1.4e-14 84.0 123 42.3
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 1.9e-14 83.6 217 33.6
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-13 80.1 105 46.7
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.8e-13 78.2 121 42.1
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-12 75.9 102 47.1
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.7e-12 74.7 154 35.1
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.5e-11 73.9 178 34.8
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-11 73.2 125 34.4
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 2.5e-11 73.2 87 48.3
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 2.1e-10 70.1 186 29.6
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 6.2e-10 68.6 184 30.4
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 6.2e-10 68.6 236 29.2
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 1.1e-09 67.8 181 33.7
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 4.0e-09 65.9 197 30.5
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 6.9e-09 65.1 152 32.9
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 1.2e-08 64.3 210 31.9
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.5e-08 63.9 200 31.0
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.0e-08 63.5 180 29.4
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.5e-08 62.4 49 57.1
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 4.5e-08 62.4 206 29.1
SEGI_22892 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 9.9e-08 61.2 186 30.6
Manes.11G073300 Manihot esculenta HOM05D001131 ORTHO05D000972 8.4e-07 58.2 216 25.9
ATR0580G176 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.9e-06 57.0 111 33.3
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 4.2e-06 55.8 208 28.4
Sed0004223 Sechium edule HOM05D001131 ORTHO05D000972 5.4e-06 55.5 199 28.6
ClCG05G012470 Citrullus lanatus HOM05D001131 ORTHO05D000972 7.1e-06 55.1 222 24.3
QL02p068251 Quercus lobata HOM05D001131 ORTHO05D000972 7.1e-06 55.1 218 25.2


User provided reference genes

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