Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.8e-175 617.5 314 100.0
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.7e-154 547.7 343 84.5
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-141 505.4 342 79.8
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-139 498.0 314 84.7
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-130 469.9 347 75.2
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.7e-130 468.0 355 73.8
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-126 455.7 312 79.8
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-125 452.2 314 78.0
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.5e-125 451.4 390 67.2
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-113 412.1 287 76.7
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-107 392.9 216 94.4
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.0e-104 381.3 216 92.6
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.6e-101 371.7 216 90.7
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-96 356.3 220 87.3
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-95 352.1 211 85.8
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-94 349.4 216 85.2
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-94 349.0 216 87.0
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-93 347.1 198 91.9
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-93 347.1 213 85.9
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-90 335.9 216 84.7
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-89 333.6 211 84.8
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-89 332.4 216 83.3
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-87 325.9 216 82.4
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.0e-86 322.0 216 83.3
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-83 314.3 203 82.3
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-83 314.3 198 82.8
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-82 310.8 174 93.1
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-78 295.8 198 80.8
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-67 260.0 214 70.1
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.0e-67 259.2 205 68.8
Nitab4.5_0004591g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-66 257.7 193 75.1
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-64 249.6 146 89.0
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-61 240.0 216 62.5
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-60 236.9 216 64.8
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-55 220.3 164 75.0
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.9e-55 218.4 124 91.9
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-54 216.5 254 54.3
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-54 215.7 198 63.6
Nitab4.5_0004269g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-50 203.4 124 85.5
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-48 196.4 100 95.0
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-45 188.0 165 63.6
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.6e-45 185.7 107 86.9
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 2.1e-44 183.7 125 76.0
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 2.4e-43 180.3 319 37.6
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.0e-43 178.3 99 89.9
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.6e-42 176.8 123 72.4
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.9e-41 172.6 101 88.1
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-40 171.0 114 78.1
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-40 171.0 100 87.0
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.9e-40 170.6 185 57.3
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.3e-40 168.3 95 89.5
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.7e-38 162.2 85 91.8
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 2.1e-36 157.1 363 35.8
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 8.2e-36 155.2 395 31.4
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.5e-33 145.6 378 31.7
Nitab4.5_0006852g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.5e-33 145.2 124 66.9
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-32 143.3 84 84.5
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.7e-31 140.2 332 37.3
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.7e-30 135.6 84 78.6
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.7e-30 135.2 210 43.3
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-29 134.4 527 25.0
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-29 134.0 319 36.1
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 9.7e-29 131.7 502 27.7
PGSC0003DMG400037259 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-28 130.6 208 42.8
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-28 129.8 107 72.9
Nitab4.5_0000109g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-28 129.0 78 85.9
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-27 127.5 70 87.1
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.0e-25 121.7 96 62.5
PGSC0003DMG400035166 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-25 120.6 196 42.3
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.8e-25 119.8 96 63.5
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.5e-25 119.0 96 62.5
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 8.5e-25 118.6 96 61.5
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-23 114.8 84 71.4
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.6e-23 113.2 96 58.3
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 4.6e-23 112.8 317 33.4
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 1.4e-22 111.3 96 59.4
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 1.8e-22 110.9 96 59.4
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 2.3e-22 110.5 90 61.1
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.0e-22 110.2 93 59.1
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.1e-22 109.4 220 38.6
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.8e-22 108.6 73 76.7
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-21 108.2 93 59.1
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.1e-21 108.2 96 56.2
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.5e-21 107.8 91 57.1
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-21 107.5 108 52.8
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-21 107.5 91 58.2
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.6e-21 107.1 87 63.2
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 5.7e-21 105.9 199 34.7
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.7e-20 104.4 107 52.3
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.8e-20 103.6 96 55.2
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-20 102.4 71 76.1
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-19 101.7 83 60.2
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 1.4e-19 101.3 124 47.6
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-19 100.9 94 57.4
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 2.4e-19 100.5 316 26.9
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 4.1e-19 99.8 91 59.3
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.1e-19 99.8 96 56.2
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 5.3e-19 99.4 221 34.8
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.4e-18 96.7 89 53.9
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-18 96.7 75 62.7
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-17 94.7 268 34.0
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 1.7e-17 94.4 94 54.3
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 1.7e-17 94.4 95 54.7
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.2e-17 94.0 94 51.1
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-17 93.6 220 33.6
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 3.8e-17 93.2 93 53.8
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-17 93.2 151 43.7
PGSC0003DMG400039936 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.0e-17 92.8 192 40.1
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.5e-17 92.0 68 64.7
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.1e-16 91.7 97 49.5
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-16 90.9 217 33.6
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-16 90.5 82 59.8
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-16 90.5 73 58.9
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 3.2e-16 90.1 97 48.5
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 7.2e-16 89.0 76 55.3
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 7.2e-16 89.0 109 45.9
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.6e-15 87.8 117 41.9
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 3.6e-15 86.7 317 29.0
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 3.6e-15 86.7 77 59.7
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 6.1e-15 85.9 466 25.3
PGSC0003DMG400045522 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.8e-14 84.3 94 44.7
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-14 83.2 70 57.1
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-13 81.3 220 34.5
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-13 81.3 186 31.2
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.0e-13 80.9 85 50.6
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 5.7e-13 79.3 206 37.9
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 3.7e-12 76.6 91 47.3
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-11 74.3 103 43.7
Nitab4.5_0006852g0060 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-11 74.3 123 39.8
Nitab4.5_0018035g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-11 74.3 272 27.2
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 3.1e-11 73.6 106 41.5
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 7.0e-11 72.4 89 47.2
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 7.0e-11 72.4 91 46.2
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.1e-11 72.0 180 32.8
PGSC0003DMG400037839 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.5e-10 70.1 153 32.0
PGSC0003DMG400007445 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.7e-10 68.9 114 36.0
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-09 68.2 91 45.1
PGSC0003DMG400046895 Solanum tuberosum HOM05D000995 ORTHO05D007165 1.3e-09 68.2 209 30.1
Nitab4.5_0000263g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-08 64.7 36 83.3
Nitab4.5_0007944g0030 Nicotiana tabacum HOM05D003617 ORTHO05D286428 1.5e-08 64.7 63 55.6
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-08 64.3 197 30.5
Sopen07g015010 Solanum pennellii HOM05D000004 ORTHO05D000034 3.2e-08 63.5 95 38.9
Nitab4.5_0000078g0220 Nicotiana tabacum HOM05D003617 ORTHO05D285826 5.5e-08 62.8 83 47.0
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-07 61.6 151 34.4
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.6e-07 61.2 106 34.9
Nitab4.5_0022154g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 2.1e-07 60.8 62 61.3
Nitab4.5_0004939g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-07 60.5 143 35.7
Sopen05g014900 Solanum pennellii HOM05D003617 ORTHO05D007165 1.0e-06 58.5 89 43.8
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-06 57.8 90 38.9
CAN.G474.5 Capsicum annuum HOM05D001802 ORTHO05D010478 8.8e-06 55.5 45 62.2
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 8.8e-06 55.5 216 30.1


User provided reference genes

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