Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 9.8e-135 483.4 236 100.0
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.6e-127 458.8 238 95.0
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 4.2e-109 398.3 242 83.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 5.6e-106 387.9 238 82.4
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 6.0e-92 341.3 195 87.7
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 3.0e-91 339.0 195 85.6
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 7.4e-90 334.3 230 76.1
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.4e-85 320.1 212 73.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 2.1e-84 316.2 238 69.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.2e-81 306.2 251 65.3
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 3.7e-81 305.4 209 71.8
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 4.8e-81 305.1 219 68.0
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 4.8e-81 305.1 209 68.9
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.8e-80 303.1 213 71.8
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.4e-79 298.9 222 67.1
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 3.4e-79 298.9 216 71.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 4.5e-79 298.5 229 67.7
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 5.9e-79 298.1 222 67.1
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 7.7e-79 297.7 239 64.0
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 7.7e-79 297.7 195 74.9
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 2.2e-78 296.2 226 69.0
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 2.2e-78 296.2 217 68.7
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 5.0e-78 295.0 182 75.8
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 8.5e-78 294.3 198 71.2
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 8.5e-78 294.3 209 68.9
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.1e-77 293.9 222 66.2
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.2e-76 290.4 182 77.5
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.6e-76 290.0 213 67.6
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.1e-76 289.7 227 65.6
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 3.6e-76 288.9 223 65.9
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.8e-75 286.6 218 64.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.8e-75 286.6 205 69.3
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 2.3e-75 286.2 210 67.6
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 3.0e-75 285.8 229 64.6
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 5.1e-75 285.0 200 69.5
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 5.1e-75 285.0 234 63.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 6.7e-75 284.6 242 63.6
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.1e-74 283.9 235 61.7
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.5e-74 283.5 209 67.9
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.5e-74 283.5 209 67.0
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.0e-74 283.1 221 66.5
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 2.5e-74 282.7 227 64.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 3.3e-74 282.3 236 63.6
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.3e-74 282.3 234 62.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 5.7e-74 281.6 181 74.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 9.7e-74 280.8 185 75.1
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 9.7e-74 280.8 219 67.6
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.2e-73 279.6 236 61.4
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 4.8e-73 278.5 181 73.5
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 4.8e-73 278.5 213 65.7
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 6.3e-73 278.1 182 72.5
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.4e-72 276.9 181 74.0
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 9.1e-72 274.2 228 64.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.5e-71 273.5 210 64.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.5e-71 273.5 236 62.7
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 4.5e-71 271.9 228 63.2
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.5e-71 271.9 186 70.4
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 4.5e-71 271.9 209 65.1
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 7.7e-71 271.2 310 52.3
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.7e-70 270.0 181 72.9
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 5.0e-70 268.5 236 61.9
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 6.5e-70 268.1 196 65.8
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 6.5e-70 268.1 196 65.8
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.1e-69 267.3 209 63.2
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.4e-69 266.9 182 71.4
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.4e-69 266.9 213 65.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 3.2e-69 265.8 195 69.2
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 3.2e-69 265.8 196 64.8
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 3.2e-69 265.8 236 61.4
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 5.5e-69 265.0 189 68.3
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 5.5e-69 265.0 181 69.6
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 5.5e-69 265.0 181 69.6
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 7.2e-69 264.6 185 69.2
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 9.4e-69 264.2 207 62.3
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.1e-68 263.1 221 62.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 2.1e-68 263.1 201 65.2
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 6.1e-68 261.5 184 67.9
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 7.9e-68 261.2 218 60.6
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 7.9e-68 261.2 185 71.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 6.7e-67 258.1 236 57.6
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.7e-66 254.2 204 63.7
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 2.2e-65 253.1 224 58.5
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 3.7e-65 252.3 182 67.6
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 7.7e-63 244.6 182 64.8
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.0e-62 244.2 170 70.6
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.7e-62 243.4 167 73.1
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 4.2e-61 238.8 214 57.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.5e-61 238.4 229 56.3
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 3.6e-60 235.7 206 59.7
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 5.2e-59 231.9 158 69.6
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-57 227.3 165 68.5
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.8e-57 225.3 191 61.3
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 7.7e-55 218.0 187 57.2
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.5e-53 213.0 154 66.9
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.5e-50 203.8 157 59.2
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.5e-50 203.8 130 73.1
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.6e-50 203.0 170 58.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.2e-46 189.9 182 58.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 6.1e-44 181.8 184 55.4
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 7.5e-42 174.9 96 90.6
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.1e-40 167.9 182 52.2
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-39 167.5 182 52.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 3.5e-39 166.0 107 70.1
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 6.6e-30 135.2 93 65.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.6e-28 130.6 138 50.0
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 5.4e-24 115.5 66 78.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.4e-19 100.9 144 44.4
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.8e-18 94.7 182 37.4
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.3e-14 83.6 52 78.8
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.5e-13 80.9 51 76.5
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.4e-10 69.7 57 61.4
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 3.7e-09 66.2 41 75.6
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 6.6e-06 55.5 81 39.5


User provided reference genes

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