Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016580g0020 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.2e-111 405.6 196 100.0
CAN.G108.59 Capsicum annuum HOM05D000072 ORTHO05D000026 1.2e-69 266.9 210 65.2
PGSC0003DMG400009115 Solanum tuberosum HOM05D000072 ORTHO05D000026 2.1e-69 266.2 210 63.3
PGSC0003DMG400009116 Solanum tuberosum HOM05D000072 ORTHO05D000026 3.5e-69 265.4 210 66.2
Sopen03g023250 Solanum pennellii HOM05D000072 ORTHO05D000026 9.5e-67 257.3 207 65.2
Solyc03g083480.4 Solanum lycopersicum HOM05D000072 ORTHO05D000026 1.2e-66 256.9 207 64.7
Peaxi162Scf00550g00410 Petunia axillaris HOM05D000072 ORTHO05D000026 1.2e-50 203.8 164 62.2
Peaxi162Scf00550g00421 Petunia axillaris HOM05D000072 ORTHO05D000026 8.1e-50 201.1 152 65.8
Sopen03g003200 Solanum pennellii HOM05D000072 ORTHO05D000026 2.9e-31 139.4 172 44.2
CAN.G108.52 Capsicum annuum HOM05D000072 ORTHO05D000026 4.6e-29 132.1 175 41.1
Cc02_g01730 Coffea canephora HOM05D000072 ORTHO05D000026 5.6e-27 125.2 189 36.0
Nitab4.5_0005987g0020 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.4e-25 119.8 189 39.2
Nitab4.5_0026540g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.6e-24 116.3 187 40.1
Migut.F01040 Erythranthe guttata HOM05D000072 ORTHO05D000026 8.4e-23 111.3 196 35.2
CAN.G108.47 Capsicum annuum HOM05D000072 ORTHO05D000026 1.9e-22 110.2 180 37.8
Solyc03g007210.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 2.7e-21 106.3 133 42.9
Nitab4.5_0000714g0040 Nicotiana tabacum HOM05D000072 ORTHO05D000026 6.0e-21 105.1 134 44.0
Nitab4.5_0008103g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 6.0e-21 105.1 192 35.9
SalBow2G2731 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.0e-20 102.8 186 33.3
Peaxi162Scf00550g00448 Petunia axillaris HOM05D000072 ORTHO05D000717 2.5e-19 99.8 179 35.2
Cc04_g10760 Coffea canephora HOM05D000072 ORTHO05D000026 4.5e-16 89.0 137 35.0
SGA_v2.0_scaffold55G19760 Striga asiatica HOM05D000072 ORTHO05D000026 4.5e-16 89.0 190 33.7
Oeu060623.1 Olea europaea HOM05D000072 ORTHO05D000026 1.3e-15 87.4 151 35.8
Oeu041335.2 Olea europaea HOM05D000072 ORTHO05D000026 2.1e-13 80.1 190 29.5
Dinv05646 Davidia involucrata HOM05D000072 ORTHO05D000026 4.6e-13 79.0 149 28.9
Dinv05653 Davidia involucrata HOM05D000072 ORTHO05D000026 3.0e-12 76.3 174 33.9
Oeu041050.1 Olea europaea HOM05D000072 ORTHO05D000026 6.7e-12 75.1 180 28.3
Oeu022475.1 Olea europaea HOM05D000072 ORTHO05D000026 1.1e-11 74.3 188 28.2
MD02G1273500 Malus domestica HOM05D000072 ORTHO05D000026 2.2e-10 70.1 184 27.7
TAR629G3031 Trochodendron aralioides HOM05D000072 ORTHO05D000026 3.7e-10 69.3 202 29.7
DCAR_009117 Daucus carota HOM05D000072 ORTHO05D000026 4.8e-10 68.9 199 26.1
Dinv05650 Davidia involucrata HOM05D000072 ORTHO05D000026 1.1e-09 67.8 128 32.0
GSVIVG01018533001 Vitis vinifera HOM05D000072 ORTHO05D000026 1.4e-09 67.4 102 36.3
TWI18G0810 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 2.4e-09 66.6 148 31.1
Cc00_g27480 Coffea canephora HOM05D000072 ORTHO05D000026 5.3e-09 65.5 201 29.9
VMungo0647G0024 Vigna mungo HOM05D000072 ORTHO05D000026 5.3e-09 65.5 216 27.3
RcHm_v2.0_Chr1g0328501 Rosa chinensis HOM05D000072 ORTHO05D000026 1.2e-08 64.3 197 26.9
VMungo0647G0934 Vigna mungo HOM05D000072 ORTHO05D000026 1.2e-08 64.3 182 26.9
Manes.11G116600 Manihot esculenta HOM05D000072 ORTHO05D000026 1.5e-08 63.9 193 27.5
DCAR_007990 Daucus carota HOM05D000072 ORTHO05D000026 2.0e-08 63.5 197 29.4
GSVIVG01005906001 Vitis vinifera HOM05D000072 ORTHO05D000026 2.6e-08 63.2 186 27.4
Manes.11G116800 Manihot esculenta HOM05D000072 ORTHO05D000026 4.5e-08 62.4 188 26.6
Cc00_g26910 Coffea canephora HOM05D000072 ORTHO05D000026 1.0e-07 61.2 196 27.0
TWI18G0827 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 1.3e-07 60.8 144 30.6
RcHm_v2.0_Chr1g0328371 Rosa chinensis HOM05D000072 ORTHO05D000026 1.7e-07 60.5 177 27.1
TWI18G0916 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 2.9e-07 59.7 199 25.6
TAR629G1556 Trochodendron aralioides HOM05D000072 ORTHO05D000026 5.0e-07 58.9 203 26.1
Prupe.2G088300 Prunus persica HOM05D000072 ORTHO05D000026 8.5e-07 58.2 202 27.7
Glyma.17G214400 Glycine max HOM05D000072 ORTHO05D000026 1.1e-06 57.8 186 29.0
Phvul.001G048900 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 1.1e-06 57.8 188 25.5
TWI18G1011 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 1.1e-06 57.8 142 30.3
DCAR_029327 Daucus carota HOM05D000072 ORTHO05D000026 1.9e-06 57.0 187 25.1
Glyma.17G214600 Glycine max HOM05D000072 ORTHO05D000026 2.5e-06 56.6 185 29.2
Nitab4.5_0001747g0090 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.5e-06 56.6 124 32.3
Phvul.001G047900 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 2.5e-06 56.6 182 28.6
TPR.G14894 Trifolium pratense HOM05D000072 ORTHO05D000026 2.5e-06 56.6 117 33.3
CANSAT21G0028 Cannabis sativa HOM05D000072 ORTHO05D000026 5.5e-06 55.5 184 26.6
Glyma.17G214900 Glycine max HOM05D000072 ORTHO05D000026 7.2e-06 55.1 187 28.3
DCAR_007992 Daucus carota HOM05D000072 ORTHO05D000026 9.4e-06 54.7 182 26.4
Manes.14G007108 Manihot esculenta HOM05D000072 ORTHO05D000026 9.4e-06 54.7 173 27.2


User provided reference genes

Program Settings