Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016565g0010 Nicotiana tabacum HOM05D000146 ORTHO05D284127 2.8e-32 141.4 72 100.0
CAN.G377.31 Capsicum annuum HOM05D000146 ORTHO05D000178 5.0e-21 104.0 91 67.0
Peaxi162Scf00984g00249 Petunia axillaris HOM05D000146 ORTHO05D000178 5.5e-20 100.5 91 65.9
Hma1.2p1_0018F.1_g012710 Hydrangea macrophylla HOM05D000146 ORTHO05D000178 1.6e-19 99.0 91 59.3
Sopen12g002640 Solanum pennellii HOM05D000146 ORTHO05D000178 3.5e-19 97.8 91 62.6
PGSC0003DMG400020682 Solanum tuberosum HOM05D000146 ORTHO05D000178 6.1e-19 97.1 91 62.6
Solyc12g006690.2 Solanum lycopersicum HOM05D000146 ORTHO05D000178 7.9e-19 96.7 91 62.6
DCAR_000350 Daucus carota HOM05D000146 ORTHO05D000178 3.9e-18 94.4 90 58.9
COL.COLO4_05754 Corchorus olitorius HOM05D000146 ORTHO05D000178 4.3e-17 90.9 92 57.6
TWI63G1805 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 5.7e-17 90.5 92 58.7
Peaxi162Scf00560g00730 Petunia axillaris HOM05D000146 ORTHO05D000178 7.4e-17 90.1 91 56.0
Cfa003341 Carpinus fangiana HOM05D000146 ORTHO05D000178 9.7e-17 89.7 91 58.2
Dinv41535 Davidia involucrata HOM05D000146 ORTHO05D000178 9.7e-17 89.7 91 53.8
Duzib168G2008 Durio zibethinus HOM05D000146 ORTHO05D000178 1.3e-16 89.4 91 59.3
CSS0033971 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 2.2e-16 88.6 91 57.1
CSS0042768 Camellia sinensis var. sinensis HOM05D000146 ORTHO05D000178 2.2e-16 88.6 91 57.1
Gohir.A05G018300 Gossypium hirsutum HOM05D000146 ORTHO05D000178 2.2e-16 88.6 91 56.0
QL02p087657 Quercus lobata HOM05D000146 ORTHO05D000178 2.2e-16 88.6 90 56.7
Gohir.D05G019200 Gossypium hirsutum HOM05D000146 ORTHO05D000178 3.7e-16 87.8 91 56.0
Gorai.009G019600 Gossypium raimondii HOM05D000146 ORTHO05D000178 3.7e-16 87.8 91 56.0
Lj7C632G19 Lonicera japonica HOM05D000146 ORTHO05D000178 3.7e-16 87.8 93 57.0
RcHm_v2.0_Chr2g0089181 Rosa chinensis HOM05D000146 ORTHO05D000178 6.3e-16 87.0 94 52.1
TWI34G1111 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 6.3e-16 87.0 92 55.4
Haze_25621 Corylus avellana HOM05D000146 ORTHO05D000178 1.1e-15 86.3 91 56.0
Atru.chr7.1187 Acer truncatum HOM05D000146 ORTHO05D000178 1.4e-15 85.9 92 53.3
Manes.14G129800 Manihot esculenta HOM05D000146 ORTHO05D000178 3.1e-15 84.7 91 56.0
Thecc.09G122300 Theobroma cacao HOM05D000146 ORTHO05D000178 3.1e-15 84.7 91 54.9
CiPaw.03G241200 Carya illinoinensis HOM05D000146 ORTHO05D000178 5.3e-15 84.0 91 53.8
vmacro23137 Vaccinium macrocarpon HOM05D000146 ORTHO05D000178 5.3e-15 84.0 92 53.3
Duzib150G1187 Durio zibethinus HOM05D000146 ORTHO05D000178 6.9e-15 83.6 91 52.7
FAN23G0805 Fragaria x ananassa HOM05D000146 ORTHO05D000178 1.2e-14 82.8 95 51.6
FAN26G1437 Fragaria x ananassa HOM05D000146 ORTHO05D000178 1.2e-14 82.8 95 51.6
Rhsim01G0077100 Rhododendron simsii HOM05D000146 ORTHO05D000178 1.2e-14 82.8 92 52.2
RhsimUnG0108300 Rhododendron simsii HOM05D000146 ORTHO05D000178 1.2e-14 82.8 92 52.2
CsaV3_2G002730 Cucumis sativus L. HOM05D000146 ORTHO05D000178 1.5e-14 82.4 93 49.5
FvH4_1g03770 Fragaria vesca HOM05D000146 ORTHO05D000178 1.5e-14 82.4 95 50.5
FAN19G2365 Fragaria x ananassa HOM05D000146 ORTHO05D000178 1.5e-14 82.4 95 50.5
Cpa.g.sc75.60 Carica papaya HOM05D000146 ORTHO05D000178 2.0e-14 82.0 91 52.7
Cc06_g08850 Coffea canephora HOM05D000146 ORTHO05D000178 2.6e-14 81.6 91 53.8
Nn8g39382 Nelumbo nucifera HOM05D000146 ORTHO05D000178 3.4e-14 81.3 91 53.8
MELO3C004520.2 Cucumis melo HOM05D000146 ORTHO05D000178 4.5e-14 80.9 94 48.9
Prupe.7G239100 Prunus persica HOM05D000146 ORTHO05D000178 4.5e-14 80.9 91 51.6
MD15G1176500 Malus domestica HOM05D000146 ORTHO05D000178 5.9e-14 80.5 91 49.5
Potri.015G093400 Populus trichocarpa HOM05D000146 ORTHO05D000178 5.9e-14 80.5 91 53.8
Sabra15G0115000 Salix brachista HOM05D000146 ORTHO05D000178 5.9e-14 80.5 91 53.8
TAR383G1066 Trochodendron aralioides HOM05D000146 ORTHO05D000178 5.9e-14 80.5 91 53.8
HanXRQChr12g0356441 Helianthus annuus HOM05D000146 ORTHO05D000178 7.7e-14 80.1 93 53.8
MD02G1036300 Malus domestica HOM05D000146 ORTHO05D000178 7.7e-14 80.1 91 50.5
Ca_21701_v3 Cicer arietinum L. HOM05D000146 ORTHO05D000178 1.0e-13 79.7 91 50.5
PSO170G0592 Papaver somniferum HOM05D000146 ORTHO05D000178 2.2e-13 78.6 101 49.5
PSO455G0197 Papaver somniferum HOM05D000146 ORTHO05D000178 2.2e-13 78.6 101 49.5
GSVIVG01015496001 Vitis vinifera HOM05D000146 ORTHO05D000178 3.8e-13 77.8 81 54.3
TAR625G1288 Trochodendron aralioides HOM05D000146 ORTHO05D000178 5.0e-13 77.4 91 50.5
HanXRQChr10g0316811 Helianthus annuus HOM05D000146 ORTHO05D000178 6.5e-13 77.0 94 51.1
Oeu042011.1 Olea europaea HOM05D000146 ORTHO05D000178 6.5e-13 77.0 91 52.7
Ciclev10008122m.g Citrus clementina HOM05D000146 ORTHO05D000178 8.5e-13 76.6 93 51.6
Actinidia22007 Actinidia chinensis HOM05D000146 ORTHO05D000178 1.1e-12 76.3 91 50.5
Manes.06G053600 Manihot esculenta HOM05D000146 ORTHO05D000178 1.1e-12 76.3 92 53.3
Actinidia40450 Actinidia chinensis HOM05D000146 ORTHO05D000178 1.4e-12 75.9 91 51.6
Lalb_Chr12g0197791 Lupinus albus HOM05D000146 ORTHO05D000178 1.9e-12 75.5 91 47.3
Aqoxy7G02085 Aquilegia oxysepala HOM05D000146 ORTHO05D000178 3.2e-12 74.7 91 50.5
PGR102G0704 Punica granatum HOM05D000146 ORTHO05D000178 3.2e-12 74.7 91 49.5
Medtr4g113790 Medicago truncatula HOM05D000146 ORTHO05D000178 4.2e-12 74.3 91 47.3
Sc18g0000750 Simmondsia chinensis HOM05D000146 ORTHO05D000178 4.2e-12 74.3 92 47.8
TPR.G10705 Trifolium pratense HOM05D000146 ORTHO05D000178 4.2e-12 74.3 91 47.3
ECA234G3779 Erigeron canadensis HOM05D000146 ORTHO05D000178 9.4e-12 73.2 93 49.5
Lsat_1_v5_gn_5_99040 Lactuca sativa HOM05D000146 ORTHO05D000178 1.2e-11 72.8 92 48.9
Eucgr.C04178 Eucalyptus grandis HOM05D000146 ORTHO05D000178 1.6e-11 72.4 91 42.9
Psat4g041360 Pisum sativum HOM05D000146 ORTHO05D000178 2.1e-11 72.0 91 48.4
Oeu029437.1 Olea europaea HOM05D000146 ORTHO05D000178 2.7e-11 71.6 92 50.0
CANSAT11G0610 Cannabis sativa HOM05D000146 ORTHO05D000178 3.6e-11 71.2 88 46.6
MBI04_g38194_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 6.1e-11 70.5 94 48.9
Oeu029429.1 Olea europaea HOM05D000146 ORTHO05D000178 6.1e-11 70.5 90 47.8
VMungo1215G3171 Vigna mungo HOM05D000146 ORTHO05D000178 6.1e-11 70.5 92 45.7
Glyma.04G148400 Glycine max HOM05D000146 ORTHO05D000178 7.9e-11 70.1 91 47.3
Phvul.009G198500 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 7.9e-11 70.1 91 47.3
Lj4g0026868 Lotus japonicus HOM05D000146 ORTHO05D000178 3.0e-10 68.2 91 42.9
Nn2g11953 Nelumbo nucifera HOM05D000146 ORTHO05D000178 3.9e-10 67.8 92 45.7
Sed0012734 Sechium edule HOM05D000146 ORTHO05D000178 3.9e-10 67.8 103 43.7
EL10Ac8g18604 Beta vulgaris HOM05D000146 ORTHO05D000178 5.1e-10 67.4 103 44.7
Glyma.17G117300 Glycine max HOM05D000146 ORTHO05D000178 5.1e-10 67.4 92 46.7
Phvul.003G162100 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 6.7e-10 67.0 92 45.7
AUR62011079 Chenopodium quinoa HOM05D000146 ORTHO05D000178 1.5e-09 65.9 74 58.1
CDE02G4542 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.5e-09 65.1 91 42.9
Glyma.05G009200 Glycine max HOM05D000146 ORTHO05D000178 4.3e-09 64.3 92 44.6
BcaB06g28103 Brassica carinata HOM05D000146 ORTHO05D000178 5.7e-09 63.9 96 41.7
Thhalv10028571m.g Eutrema salsugineum HOM05D000146 ORTHO05D000178 5.7e-09 63.9 96 41.7
AT2G26700 Arabidopsis thaliana HOM05D000146 ORTHO05D000178 9.7e-09 63.2 96 41.7
A04p20470 Brassica napus HOM05D000146 ORTHO05D000178 9.7e-09 63.2 97 41.2
C04p56230 Brassica napus HOM05D000146 ORTHO05D000178 9.7e-09 63.2 97 41.2
BolC4t27149H Brassica oleracea HOM05D000146 ORTHO05D000178 9.7e-09 63.2 97 41.2
BraA04t17623Z Brassica rapa HOM05D000146 ORTHO05D000178 9.7e-09 63.2 97 41.2
Carub.0004s0704 Capsella rubella HOM05D000146 ORTHO05D000178 9.7e-09 63.2 97 41.2
Sp4g08880 Schrenkiella parvula HOM05D000146 ORTHO05D000178 1.3e-08 62.8 96 43.8
THA.LOC104815419 Tarenaya hassleriana HOM05D000146 ORTHO05D000178 1.3e-08 62.8 95 42.1
CARHR118780 Cardamine hirsuta HOM05D000146 ORTHO05D000178 1.7e-08 62.4 96 40.6
Aa31LG5G9050 Aethionema arabicum HOM05D000146 ORTHO05D000178 2.2e-08 62.0 101 42.6
AL4G19740 Arabidopsis lyrata HOM05D000146 ORTHO05D000178 2.2e-08 62.0 96 40.6
arahy.Tifrunner.gnm1.ann1.Q6EFFR Arachis hypogaea HOM05D000146 ORTHO05D000178 3.7e-08 61.2 92 42.4
arahy.Tifrunner.gnm1.ann1.WT21TW Arachis hypogaea HOM05D000146 ORTHO05D000178 6.3e-08 60.5 92 42.4
VMungo1309G1686 Vigna mungo HOM05D000146 ORTHO05D000178 2.4e-07 58.5 90 41.1
Oeu005639.1 Olea europaea HOM05D000146 ORTHO05D000178 5.9e-06 53.9 73 47.9


User provided reference genes

Program Settings