Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.2e-38 163.3 126 100.0
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.8e-35 152.1 126 96.0
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 5.2e-34 147.9 126 88.1
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.3e-32 143.3 122 89.3
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.3e-32 143.3 122 89.3
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 6.4e-32 141.0 130 86.2
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.1e-31 140.2 125 85.6
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.4e-31 139.8 130 85.4
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.4e-31 139.8 130 85.4
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.9e-31 139.4 125 87.2
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 2.4e-31 139.0 127 87.4
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.4e-31 139.0 128 85.2
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.4e-31 139.0 121 89.3
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 3.2e-31 138.7 126 84.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 4.1e-31 138.3 125 86.4
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 4.1e-31 138.3 128 85.9
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 5.4e-31 137.9 125 84.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 5.4e-31 137.9 126 84.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 7.1e-31 137.5 127 85.8
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 7.1e-31 137.5 129 85.3
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 9.2e-31 137.1 128 84.4
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 9.2e-31 137.1 128 84.4
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 9.2e-31 137.1 127 85.0
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 9.2e-31 137.1 127 85.8
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.6e-30 136.3 128 83.6
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.6e-30 136.3 126 73.0
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 2.7e-30 135.6 127 84.3
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 2.7e-30 135.6 129 84.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 4.6e-30 134.8 127 85.8
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 6.0e-30 134.4 125 83.2
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 6.0e-30 134.4 125 83.2
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 6.0e-30 134.4 125 83.2
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.3e-29 133.3 127 82.7
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.3e-29 133.3 127 82.7
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.3e-29 133.3 127 82.7
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.7e-29 132.9 127 84.3
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.7e-29 132.9 130 82.3
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.7e-29 132.9 127 84.3
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.7e-29 132.9 127 85.0
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.3e-29 132.5 127 82.7
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 2.3e-29 132.5 128 83.6
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 3.0e-29 132.1 125 82.4
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 3.0e-29 132.1 125 82.4
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.0e-29 132.1 129 82.2
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.9e-29 131.7 127 81.9
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 3.9e-29 131.7 127 82.7
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 3.9e-29 131.7 127 83.5
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 6.6e-29 131.0 125 81.6
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.1e-28 130.2 126 81.7
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 1.1e-28 130.2 128 81.2
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.9e-28 129.4 129 84.5
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.5e-28 129.0 129 82.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 2.5e-28 129.0 127 82.7
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.3e-28 128.6 129 80.6
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 3.3e-28 128.6 129 79.8
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 3.3e-28 128.6 128 82.0
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 3.3e-28 128.6 127 82.7
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 3.3e-28 128.6 127 83.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.3e-28 128.3 129 83.7
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 4.3e-28 128.3 127 83.5
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 5.6e-28 127.9 125 80.8
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 5.6e-28 127.9 127 82.7
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 7.3e-28 127.5 128 80.5
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 9.6e-28 127.1 128 80.5
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.6e-27 126.3 125 79.2
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.6e-27 126.3 127 80.3
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.6e-27 126.3 126 81.7
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.6e-27 126.3 127 80.3
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.1e-27 125.9 128 80.5
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.1e-27 125.9 127 81.9
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 3.6e-27 125.2 127 80.3
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 8.1e-27 124.0 126 80.2
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.8e-26 122.9 131 78.6
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.8e-26 122.9 122 79.5
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 2.4e-26 122.5 127 63.8
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 3.1e-26 122.1 131 79.4
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 6.8e-26 120.9 129 77.5
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.2e-25 120.2 127 77.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 4.4e-25 118.2 123 64.2
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 1.7e-24 116.3 110 80.9
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 2.2e-24 115.9 129 74.4
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 2.9e-24 115.5 119 86.6
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 8.4e-24 114.0 129 75.2
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.9e-23 112.8 122 81.1
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 9.3e-23 110.5 124 77.4
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 4.6e-22 108.2 113 76.1
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 6.6e-21 104.4 123 72.4
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 6.6e-21 104.4 124 46.8
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.5e-20 102.4 60 83.3
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 2.5e-20 102.4 114 80.7
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.8e-18 96.3 58 77.6
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 3.1e-18 95.5 60 78.3
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 3.4e-17 92.0 127 70.9
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.1e-15 87.0 123 70.7
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 1.9e-15 86.3 89 73.0
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 2.4e-15 85.9 122 69.7
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 4.2e-15 85.1 128 44.5
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 3.9e-13 78.6 114 65.8
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.5e-12 75.9 100 42.0
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.5e-09 66.6 40 70.0
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.0e-09 66.2 123 64.2
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.9e-08 62.4 44 65.9


User provided reference genes

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