Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 4.0e-51 204.5 108 100.0
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 4.6e-47 191.0 108 92.6
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 1.1e-40 169.9 108 85.2
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 1.4e-40 169.5 108 84.3
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 1.9e-40 169.1 109 84.4
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 3.2e-40 168.3 110 81.8
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 9.3e-40 166.8 110 81.8
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 2.1e-31 139.0 102 73.5
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 2.3e-30 135.6 98 74.5
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 3.0e-30 135.2 103 68.9
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 1.9e-29 132.5 103 69.9
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 2.5e-29 132.1 98 70.4
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 7.4e-29 130.6 104 67.3
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 9.7e-29 130.2 105 69.5
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 9.7e-29 130.2 105 70.5
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 2.2e-28 129.0 105 68.6
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 3.7e-28 128.3 107 65.4
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 8.2e-28 127.1 96 67.7
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 1.1e-27 126.7 103 66.0
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 1.4e-27 126.3 103 65.0
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 1.4e-27 126.3 103 66.0
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 1.4e-27 126.3 103 66.0
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 2.4e-27 125.6 99 66.7
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 5.3e-27 124.4 103 67.0
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 9.1e-27 123.6 105 65.7
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 1.5e-26 122.9 103 66.0
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 1.5e-26 122.9 103 64.1
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 2.0e-26 122.5 98 67.3
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 2.6e-26 122.1 106 64.2
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.4e-26 121.7 105 65.7
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 3.4e-26 121.7 107 65.4
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 4.5e-26 121.3 93 67.7
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 5.9e-26 120.9 103 64.1
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 1.3e-25 119.8 103 64.1
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 1.3e-25 119.8 119 57.1
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 2.9e-25 118.6 96 66.7
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 3.8e-25 118.2 102 62.7
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 3.8e-25 118.2 95 65.3
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 3.8e-25 118.2 103 61.2
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 3.8e-25 118.2 95 67.4
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 8.5e-25 117.1 102 62.7
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 1.9e-24 115.9 98 63.3
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 3.2e-24 115.2 107 60.7
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 3.2e-24 115.2 95 66.3
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 4.2e-24 114.8 106 58.5
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 4.2e-24 114.8 110 59.1
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 9.4e-24 113.6 130 53.1
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 9.4e-24 113.6 112 59.8
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 9.4e-24 113.6 99 61.6
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 1.6e-23 112.8 101 61.4
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 2.1e-23 112.5 102 61.8
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 6.1e-23 110.9 104 63.5
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 1.0e-22 110.2 105 59.0
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 1.0e-22 110.2 105 61.0
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 1.8e-22 109.4 95 61.1
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.8e-22 109.4 95 64.2
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 2.3e-22 109.0 96 66.7
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 3.0e-22 108.6 94 59.6
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 3.9e-22 108.2 95 62.1
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 3.9e-22 108.2 95 63.2
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 6.7e-22 107.5 102 59.8
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 6.7e-22 107.5 102 58.8
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 6.7e-22 107.5 102 59.8
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 1.1e-21 106.7 107 55.1
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.5e-21 106.3 105 61.9
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 1.5e-21 106.3 100 60.0
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 1.5e-21 106.3 106 58.5
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 2.6e-21 105.5 106 58.5
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 2.6e-21 105.5 106 58.5
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 2.6e-21 105.5 89 67.4
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 2.6e-21 105.5 90 65.6
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 2.6e-21 105.5 91 62.6
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 3.3e-21 105.1 93 61.3
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 3.3e-21 105.1 106 57.5
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 4.4e-21 104.8 93 60.2
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 7.4e-21 104.0 106 57.5
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 1.3e-20 103.2 106 56.6
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 1.3e-20 103.2 104 53.8
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 1.7e-20 102.8 96 57.3
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 2.2e-20 102.4 98 59.2
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 4.8e-20 101.3 101 56.4
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 8.2e-20 100.5 105 56.2
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 1.8e-19 99.4 100 55.0
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 1.8e-19 99.4 90 64.4
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 4.1e-19 98.2 88 65.9
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 9.1e-19 97.1 96 58.3
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 1.5e-18 96.3 88 59.1
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 2.0e-18 95.9 107 55.1
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 2.0e-18 95.9 80 63.8
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 2.0e-18 95.9 89 60.7
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 5.9e-18 94.4 107 54.2
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 5.9e-18 94.4 107 54.2
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 5.9e-18 94.4 107 54.2
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 7.7e-18 94.0 105 51.4
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 1.0e-17 93.6 107 55.1
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 5.0e-17 91.3 73 64.4
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 6.5e-17 90.9 104 51.0
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 1.4e-16 89.7 97 55.7
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 3.2e-16 88.6 82 57.3
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 4.2e-16 88.2 105 49.5
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 5.5e-16 87.8 95 51.6
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 1.6e-15 86.3 81 65.4
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 3.6e-15 85.1 88 56.8
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 8.0e-15 84.0 59 71.2
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 9.7e-13 77.0 75 56.0
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.7e-12 76.3 88 52.3
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 4.8e-12 74.7 83 57.8
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 1.1e-11 73.6 75 57.3
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 4.1e-11 71.6 100 46.0
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 5.3e-11 71.2 101 43.6
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 7.7e-10 67.4 100 40.0
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.7e-07 58.9 66 48.5
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 6.1e-07 57.8 98 41.8


User provided reference genes

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