Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0016190g0010 Nicotiana tabacum HOM05D004372 ORTHO05D004331 1.1e-34 149.4 78 100.0
Nitab4.5_0001326g0030 Nicotiana tabacum HOM05D004372 ORTHO05D004331 6.3e-30 133.7 77 89.6
Solyc06g076310.1 Solanum lycopersicum HOM05D004372 ORTHO05D004331 6.3e-22 107.1 75 80.0
Sopen06g032730 Solanum pennellii HOM05D004372 ORTHO05D004331 6.3e-22 107.1 75 80.0
CAN.G394.69 Capsicum annuum HOM05D004372 ORTHO05D004331 4.1e-21 104.4 77 76.6
PGSC0003DMG400030326 Solanum tuberosum HOM05D004372 ORTHO05D004331 4.1e-21 104.4 78 78.2
Peaxi162Scf00774g00035 Petunia axillaris HOM05D004372 ORTHO05D004331 2.6e-15 85.1 66 77.3
Nn2g11160 Nelumbo nucifera HOM05D004372 ORTHO05D004331 7.3e-10 67.0 75 48.0
Thecc.09G318100 Theobroma cacao HOM05D004372 ORTHO05D004331 9.5e-10 66.6 79 50.6
QL01p030934 Quercus lobata HOM05D004372 ORTHO05D004331 1.6e-09 65.9 66 50.0
Nn2g13398 Nelumbo nucifera HOM05D004372 ORTHO05D004331 2.8e-09 65.1 62 51.6
COL.COLO4_18555 Corchorus olitorius HOM05D004372 ORTHO05D004331 1.0e-08 63.2 83 49.4
CiPaw.01G289300 Carya illinoinensis HOM05D004372 ORTHO05D004331 1.4e-08 62.8 69 43.5
Duzib150G1613 Durio zibethinus HOM05D004372 ORTHO05D004331 1.8e-08 62.4 63 50.8
QL07p048809 Quercus lobata HOM05D004372 ORTHO05D004331 3.1e-08 61.6 63 60.3
Ciclev10029728m.g Citrus clementina HOM05D004372 ORTHO05D004331 8.9e-08 60.1 61 54.1
Oeu026714.1 Olea europaea HOM05D004372 ORTHO05D004331 8.9e-08 60.1 79 43.0
A10p06030 Brassica napus HOM05D004372 ORTHO05D004331 1.5e-07 59.3 59 45.8
BraA10t42865Z Brassica rapa HOM05D004372 ORTHO05D004331 1.5e-07 59.3 59 45.8
Carub.0001s0682 Capsella rubella HOM05D004372 ORTHO05D004331 1.5e-07 59.3 51 51.0
CiPaw.13G091200 Carya illinoinensis HOM05D004372 ORTHO05D004331 1.5e-07 59.3 66 56.1
Cc01_g13170 Coffea canephora HOM05D004372 ORTHO05D004331 1.5e-07 59.3 63 46.0
Lalb_Chr14g0375161 Lupinus albus HOM05D004372 ORTHO05D004331 1.5e-07 59.3 57 61.4
CsaV3_3G034820 Cucumis sativus L. HOM05D004372 ORTHO05D004331 2.0e-07 58.9 59 50.8
BcaB02g06736 Brassica carinata HOM05D004372 ORTHO05D004331 2.6e-07 58.5 62 43.5
BcaB03g13391 Brassica carinata HOM05D004372 ORTHO05D004331 2.6e-07 58.5 52 51.9
Gohir.A05G094000 Gossypium hirsutum HOM05D004372 ORTHO05D004331 2.6e-07 58.5 75 41.3
Prupe.6G072300 Prunus persica HOM05D004372 ORTHO05D004331 2.6e-07 58.5 67 46.3
CiPaw.15G088800 Carya illinoinensis HOM05D004372 ORTHO05D004331 3.4e-07 58.2 63 57.1
ClCG10G021220 Citrullus lanatus HOM05D004372 ORTHO05D004331 3.4e-07 58.2 59 45.8
FvH4_6g13440 Fragaria vesca HOM05D004372 ORTHO05D004331 3.4e-07 58.2 59 42.4
FAN02G2532 Fragaria x ananassa HOM05D004372 ORTHO05D004331 3.4e-07 58.2 64 42.2
FAN14G0518 Fragaria x ananassa HOM05D004372 ORTHO05D004331 3.4e-07 58.2 59 42.4
Prupe.6G257600 Prunus persica HOM05D004372 ORTHO05D004331 3.4e-07 58.2 60 46.7
Haze_20817 Corylus avellana HOM05D004372 ORTHO05D004331 4.4e-07 57.8 61 47.5
TAR636G3128 Trochodendron aralioides HOM05D004372 ORTHO05D004331 4.4e-07 57.8 69 42.0
A08p35620 Brassica napus HOM05D004372 ORTHO05D004331 5.8e-07 57.4 52 51.9
BraA08t35468Z Brassica rapa HOM05D004372 ORTHO05D004331 5.8e-07 57.4 52 51.9
Eucgr.J01238 Eucalyptus grandis HOM05D004372 ORTHO05D004331 5.8e-07 57.4 71 46.5
FAN09G4335 Fragaria x ananassa HOM05D004372 ORTHO05D004331 5.8e-07 57.4 59 42.4
MD11G1097200 Malus domestica HOM05D004372 ORTHO05D004331 5.8e-07 57.4 61 47.5
Os01g0843700 Oryza sativa ssp. japonica HOM05D004372 ORTHO05D004331 5.8e-07 57.4 59 40.7
PGR004G0648 Punica granatum HOM05D004372 ORTHO05D004331 5.8e-07 57.4 72 48.6
Zm00001eb148250 Zea mays HOM05D004372 ORTHO05D004331 5.8e-07 57.4 57 42.1
C05p05520 Brassica napus HOM05D004372 ORTHO05D004331 7.5e-07 57.0 59 44.1
BolC5t29323H Brassica oleracea HOM05D004372 ORTHO05D004331 7.5e-07 57.0 59 44.1
HanXRQChr08g0220931 Helianthus annuus HOM05D004372 ORTHO05D004331 7.5e-07 57.0 62 46.8
TAR633G2336 Trochodendron aralioides HOM05D004372 ORTHO05D004331 7.5e-07 57.0 69 42.0
Atru.chr12.419 Acer truncatum HOM05D004372 ORTHO05D004331 9.8e-07 56.6 67 43.3
BcaC05g24693 Brassica carinata HOM05D004372 ORTHO05D004331 9.8e-07 56.6 51 51.0
Lsat_1_v5_gn_8_15240 Lactuca sativa HOM05D004372 ORTHO05D004331 1.3e-06 56.2 56 46.4
MBI05_g29695_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D000814 1.3e-06 56.2 69 44.9
MBI14_g04662_MAGBIO Magnolia biondii HOM05D004372 ORTHO05D004331 1.3e-06 56.2 70 41.4
MD04G1131100 Malus domestica HOM05D004372 ORTHO05D004331 1.3e-06 56.2 59 44.1
Os03g0822400 Oryza sativa ssp. japonica HOM05D004372 ORTHO05D004331 1.3e-06 56.2 73 41.1
Lsat_1_v5_gn_5_169301 Lactuca sativa HOM05D004372 ORTHO05D004331 1.7e-06 55.8 75 49.3
RcHm_v2.0_Chr3g0466321 Rosa chinensis HOM05D004372 ORTHO05D004331 1.7e-06 55.8 59 42.4
Sp1g06230 Schrenkiella parvula HOM05D004372 ORTHO05D004331 1.7e-06 55.8 64 42.2
FAN16G1658 Fragaria x ananassa HOM05D023252 ORTHO05D025479 2.2e-06 55.5 66 51.5
Gorai.009G097700 Gossypium raimondii HOM05D004372 ORTHO05D004331 2.2e-06 55.5 76 50.0
AL1G17680 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 3.7e-06 54.7 65 38.5
HPP92_019243 Vanilla planifolia HOM05D004372 ORTHO05D004331 3.7e-06 54.7 59 42.4
Cpa.g.sc81.114 Carica papaya HOM05D004372 ORTHO05D004331 4.9e-06 54.3 62 46.8
FAN05G2794 Fragaria x ananassa HOM05D004372 ORTHO05D004331 4.9e-06 54.3 59 42.4
Cfa017356 Carpinus fangiana HOM05D004372 ORTHO05D004331 6.4e-06 53.9 61 45.9
Gohir.D05G094500 Gossypium hirsutum HOM05D004372 ORTHO05D004331 6.4e-06 53.9 76 48.7
Sed0010480 Sechium edule HOM05D004372 ORTHO05D004331 6.4e-06 53.9 64 50.0
Haze_17088 Corylus avellana HOM05D004372 ORTHO05D004331 8.3e-06 53.5 62 40.3
MELO3C009251.2 Cucumis melo HOM05D004372 ORTHO05D004331 8.3e-06 53.5 59 49.2
Medtr5g080040 Medicago truncatula HOM05D004372 ORTHO05D004331 8.3e-06 53.5 66 40.9
THA.LOC109117261 Tarenaya hassleriana HOM05D004372 ORTHO05D004331 8.3e-06 53.5 62 38.7


User provided reference genes

Program Settings