Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015601g0010 Nicotiana tabacum HOM05D000875 ORTHO05D000684 2.5e-148 528.9 294 100.0
Nitab4.5_0005884g0030 Nicotiana tabacum HOM05D000875 ORTHO05D000684 1.8e-130 469.5 296 91.6
PGSC0003DMG400020631 Solanum tuberosum HOM05D000875 ORTHO05D000684 1.9e-82 310.1 299 71.6
Sopen04g024600 Solanum pennellii HOM05D000875 ORTHO05D000684 5.4e-82 308.5 299 70.6
Solyc04g054800.3 Solanum lycopersicum HOM05D000875 ORTHO05D000684 7.3e-79 298.1 285 66.3
Peaxi162Scf00422g00079 Petunia axillaris HOM05D000875 ORTHO05D000684 5.1e-64 248.8 302 58.9
Dinv16307 Davidia involucrata HOM05D000875 ORTHO05D000684 2.4e-58 229.9 297 56.2
Oeu045788.1 Olea europaea HOM05D000875 ORTHO05D000684 3.9e-56 222.6 299 52.8
Hma1.2p1_0148F.1_g065990 Hydrangea macrophylla HOM05D000875 ORTHO05D000684 3.4e-52 209.5 299 52.5
TAR628G1378 Trochodendron aralioides HOM05D000875 ORTHO05D000684 1.9e-50 203.8 293 50.5
DCAR_011505 Daucus carota HOM05D000875 ORTHO05D000684 2.4e-50 203.4 292 49.3
Cc07_g15510 Coffea canephora HOM05D000875 ORTHO05D000684 2.1e-49 200.3 228 61.0
GSVIVG01006373001 Vitis vinifera HOM05D000875 ORTHO05D000684 2.1e-49 200.3 303 50.8
CSS0041026 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 7.9e-49 198.4 317 49.5
Oeu051800.1 Olea europaea HOM05D000875 ORTHO05D000684 1.8e-48 197.2 286 50.3
Thecc.01G105100 Theobroma cacao HOM05D000875 ORTHO05D000684 4.0e-45 186.0 251 54.6
Sabra05G0064300 Salix brachista HOM05D000875 ORTHO05D000684 1.2e-44 184.5 306 47.1
Potri.005G078300 Populus trichocarpa HOM05D000875 ORTHO05D000684 4.5e-44 182.6 242 52.9
Prupe.6G181200 Prunus persica HOM05D000875 ORTHO05D000684 1.0e-43 181.4 317 46.1
Migut.L00105 Erythranthe guttata HOM05D000875 ORTHO05D000684 6.5e-43 178.7 306 46.1
Actinidia28873 Actinidia chinensis HOM05D000875 ORTHO05D000684 5.5e-42 175.6 302 47.7
Nn5g29044 Nelumbo nucifera HOM05D000875 ORTHO05D000684 2.1e-41 173.7 304 46.4
Dinv21930 Davidia involucrata HOM05D000875 ORTHO05D000684 2.7e-41 173.3 307 49.5
MD01G1025500 Malus domestica HOM05D000875 ORTHO05D000684 3.5e-41 172.9 263 47.9
MSTRG.3794 Avicennia marina HOM05D000875 ORTHO05D000684 6.0e-41 172.2 309 42.1
Rhsim08G0009300 Rhododendron simsii HOM05D000875 ORTHO05D000684 6.0e-41 172.2 314 44.6
Duzib264G0516 Durio zibethinus HOM05D000875 ORTHO05D000684 5.1e-40 169.1 301 44.2
Gorai.007G241300 Gossypium raimondii HOM05D000875 ORTHO05D000684 1.5e-39 167.5 306 44.1
Duzib147G1235 Durio zibethinus HOM05D000875 ORTHO05D000684 2.5e-39 166.8 248 48.4
MBI05_g46940_MAGBIO Magnolia biondii HOM05D000875 ORTHO05D000684 3.3e-39 166.4 241 49.4
Manes.12G137400 Manihot esculenta HOM05D000875 ORTHO05D000684 4.8e-38 162.5 241 51.0
TWI77G0844 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 1.4e-37 161.0 287 47.0
Atru.chr4.160 Acer truncatum HOM05D000875 ORTHO05D000684 1.8e-37 160.6 275 45.1
CiPaw.03G139700 Carya illinoinensis HOM05D000875 ORTHO05D000684 1.8e-37 160.6 318 45.3
Atru.chr4.148 Acer truncatum HOM05D000875 ORTHO05D000684 5.3e-37 159.1 275 44.7
SalBow5G2150 Salvia bowleyana HOM05D000875 ORTHO05D000684 5.3e-37 159.1 292 46.6
FAN26G3100 Fragaria x ananassa HOM05D000875 ORTHO05D000684 6.9e-37 158.7 243 46.1
FAN19G2733 Fragaria x ananassa HOM05D000875 ORTHO05D000684 1.2e-36 157.9 247 46.2
vmacro18611 Vaccinium macrocarpon HOM05D000875 ORTHO05D000684 1.5e-36 157.5 314 43.6
FvH4_1g21340 Fragaria vesca HOM05D000875 ORTHO05D000684 4.5e-36 156.0 247 46.6
Nn1g05290 Nelumbo nucifera HOM05D000875 ORTHO05D000684 5.9e-36 155.6 287 45.6
QL06p050072 Quercus lobata HOM05D000875 ORTHO05D000684 1.7e-35 154.1 343 41.1
Gohir.A11G200300 Gossypium hirsutum HOM05D000875 ORTHO05D000684 5.0e-35 152.5 262 43.5
MBI05_g06570_MAGBIO Magnolia biondii HOM05D000875 ORTHO05D000684 5.0e-35 152.5 240 49.6
FAN28G0079 Fragaria x ananassa HOM05D000875 ORTHO05D000684 1.4e-34 151.0 242 47.1
SalBow5G4521 Salvia bowleyana HOM05D000875 ORTHO05D000684 2.5e-34 150.2 291 44.3
Actinidia32972 Actinidia chinensis HOM05D000875 ORTHO05D000684 3.2e-34 149.8 223 50.7
CAN.G972.2 Capsicum annuum HOM05D000875 ORTHO05D000684 9.3e-34 148.3 126 70.6
COL.COLO4_09925 Corchorus olitorius HOM05D000875 ORTHO05D000684 9.3e-34 148.3 264 45.1
Lsat_1_v5_gn_5_42720 Lactuca sativa HOM05D000875 ORTHO05D000684 9.3e-34 148.3 272 47.4
Gohir.D11G223600 Gossypium hirsutum HOM05D000875 ORTHO05D000684 1.2e-33 147.9 264 43.2
RcHm_v2.0_Chr2g0115201 Rosa chinensis HOM05D000875 ORTHO05D000684 3.6e-33 146.4 300 39.3
Lj4A882T15 Lonicera japonica HOM05D000875 ORTHO05D000684 2.3e-32 143.7 257 44.7
CAN.G972.1 Capsicum annuum HOM05D000875 ORTHO05D000684 5.1e-32 142.5 134 70.9
Ciclev10027553m.g Citrus clementina HOM05D000875 ORTHO05D000684 4.3e-31 139.4 243 42.8
arahy.Tifrunner.gnm1.ann1.NGZW1R Arachis hypogaea HOM05D000875 ORTHO05D000684 9.7e-31 138.3 252 44.0
Cfa002690 Carpinus fangiana HOM05D000875 ORTHO05D000684 9.7e-31 138.3 308 38.3
FAN23G1715 Fragaria x ananassa HOM05D000875 ORTHO05D000684 1.3e-30 137.9 203 45.3
A02p00350 Brassica napus HOM05D000875 ORTHO05D000684 2.2e-30 137.1 276 40.9
arahy.Tifrunner.gnm1.ann1.F33RZJ Arachis hypogaea HOM05D000875 ORTHO05D000684 2.8e-30 136.7 253 42.7
BolC2t06393H Brassica oleracea HOM05D000875 ORTHO05D000684 3.7e-30 136.3 245 43.7
BraA02t05020Z Brassica rapa HOM05D000875 ORTHO05D000684 4.8e-30 136.0 276 40.9
THA.LOC104804548 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 4.8e-30 136.0 260 41.5
Lj4A884G23 Lonicera japonica HOM05D000875 ORTHO05D000684 1.1e-29 134.8 242 43.8
CANSAT01G1924 Cannabis sativa HOM05D000875 ORTHO05D000684 1.4e-29 134.4 248 43.5
Sp6g33250 Schrenkiella parvula HOM05D000875 ORTHO05D000684 1.4e-29 134.4 286 42.7
Haze_24962 Corylus avellana HOM05D000875 ORTHO05D000684 6.9e-29 132.1 280 39.3
Lalb_Chr11g0075251 Lupinus albus HOM05D000875 ORTHO05D000684 9.1e-29 131.7 308 37.7
C02p04290 Brassica napus HOM05D000875 ORTHO05D000684 1.2e-28 131.3 256 41.8
Thhalv10013690m.g Eutrema salsugineum HOM05D000875 ORTHO05D000684 1.2e-28 131.3 245 43.7
ECA246G3652 Erigeron canadensis HOM05D000875 ORTHO05D000684 2.6e-28 130.2 272 44.5
Aa31LG3G16990 Aethionema arabicum HOM05D000875 ORTHO05D000684 2.9e-27 126.7 275 42.2
CDE10G0827 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 6.5e-27 125.6 291 42.6
CARHR203140 Cardamine hirsuta HOM05D000875 ORTHO05D000684 8.5e-27 125.2 284 41.2
unitig_32.g10693 Utricularia gibba HOM05D000875 ORTHO05D000684 1.1e-26 124.8 282 38.3
AT5G10150 Arabidopsis thaliana HOM05D000875 ORTHO05D000684 1.4e-26 124.4 307 39.4
Carub.0006s0861 Capsella rubella HOM05D000875 ORTHO05D000684 1.4e-26 124.4 257 43.6
BcaC03g13298 Brassica carinata HOM05D000875 ORTHO05D000684 1.9e-26 124.0 289 38.1
AL6G20610 Arabidopsis lyrata HOM05D000875 ORTHO05D000684 9.4e-26 121.7 263 41.8
AL6G20640 Arabidopsis lyrata HOM05D000875 ORTHO05D000684 1.2e-25 121.3 263 41.8
Eucgr.I00418 Eucalyptus grandis HOM05D000875 ORTHO05D000684 2.1e-25 120.6 276 42.0
unitig_747.g21823 Utricularia gibba HOM05D000875 ORTHO05D000684 6.1e-25 119.0 267 41.9
HanXRQChr15g0470951 Helianthus annuus HOM05D000875 ORTHO05D000684 1.0e-24 118.2 233 40.8
PGR102G1328 Punica granatum HOM05D000875 ORTHO05D000684 6.7e-24 115.5 254 39.8
ClCG07G009630 Citrullus lanatus HOM05D000875 ORTHO05D000684 9.7e-23 111.7 313 36.4
TPR.G2242 Trifolium pratense HOM05D000875 ORTHO05D000684 2.4e-21 107.1 298 36.6
Migut.H02383 Erythranthe guttata HOM05D000875 ORTHO05D000684 5.3e-21 105.9 185 52.4
Sc16g0005470 Simmondsia chinensis HOM05D000875 ORTHO05D000684 9.1e-21 105.1 279 35.1
PSO541G4997 Papaver somniferum HOM05D000875 ORTHO05D000684 4.5e-20 102.8 142 49.3
Ca_17717_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 5.9e-20 102.4 299 34.8
Psat7g052920 Pisum sativum HOM05D000875 ORTHO05D000684 2.1e-17 94.0 318 35.2
CsaV3_4G004680 Cucumis sativus L. HOM05D000875 ORTHO05D000684 3.6e-17 93.2 211 38.4
ATR0564G293 Amborella trichopoda HOM05D000875 ORTHO05D000684 3.9e-16 89.7 260 35.4
PSO133G0057 Papaver somniferum HOM05D000875 ORTHO05D000684 1.5e-15 87.8 86 60.5
Lj4g0014963 Lotus japonicus HOM05D000875 ORTHO05D000684 9.7e-15 85.1 270 34.4
Medtr8g091300 Medicago truncatula HOM05D000875 ORTHO05D000684 1.7e-14 84.3 310 33.9
SGA_v2.0_scaffold28G11898 Striga asiatica HOM05D000875 ORTHO05D000684 1.8e-13 80.9 294 37.1
AUR62003768 Chenopodium quinoa HOM05D000875 ORTHO05D000684 4.1e-13 79.7 242 34.3
Phvul.002G261900 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 4.1e-13 79.7 247 34.4
CsaV3_UNG218500 Cucumis sativus L. HOM05D000875 ORTHO05D000684 1.3e-11 74.7 112 44.6
Sed0009948 Sechium edule HOM05D000875 ORTHO05D000684 2.2e-11 73.9 121 46.3
VMungo0251G3232 Vigna mungo HOM05D000875 ORTHO05D000684 2.2e-11 73.9 248 34.7
THA.LOC104799080 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 3.8e-11 73.2 87 54.0
Hund16269 Selenicereus undatus HOM05D000875 ORTHO05D000684 5.0e-11 72.8 234 32.5
AUR62002030 Chenopodium quinoa HOM05D000875 ORTHO05D000684 6.5e-11 72.4 241 33.2
HPP92_027253 Vanilla planifolia HOM05D000875 ORTHO05D000684 7.2e-10 68.9 250 38.4
CDE10G0513 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 8.0e-09 65.5 92 56.5
Glyma.08G138500 Glycine max HOM05D000875 ORTHO05D000684 2.3e-08 63.9 251 33.1
CAN.G546.48 Capsicum annuum HOM05D000875 ORTHO05D000684 4.0e-08 63.2 277 30.0
Lsat_1_v5_gn_6_43200 Lactuca sativa HOM05D000875 ORTHO05D000684 4.0e-08 63.2 263 30.4
EL10Ac6g15073 Beta vulgaris HOM05D000875 ORTHO05D000684 5.2e-08 62.8 174 30.5
CiPaw.13G123100 Carya illinoinensis HOM05D000875 ORTHO05D000684 1.2e-07 61.6 263 30.8
SEGI_30854 Sequoiadendron giganteum HOM05D000875 ORTHO05D000684 1.2e-07 61.6 222 34.2
Peaxi162Scf00983g00415 Petunia axillaris HOM05D000875 ORTHO05D000684 1.5e-07 61.2 279 30.5
Duzib150G0456 Durio zibethinus HOM05D000875 ORTHO05D000684 2.0e-07 60.8 258 31.0
Gohir.A03G029200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 2.6e-07 60.5 265 32.1
MBI05_g35604_MAGBIO Magnolia biondii HOM05D000875 ORTHO05D000684 3.3e-07 60.1 219 31.1
Nitab4.5_0028110g0010 Nicotiana tabacum HOM05D000875 ORTHO05D000684 3.3e-07 60.1 260 30.8
Nn2g10472 Nelumbo nucifera HOM05D000875 ORTHO05D000684 4.4e-07 59.7 163 32.5
Solyc11g066380.3 Solanum lycopersicum HOM05D000875 ORTHO05D000684 4.4e-07 59.7 278 29.5
Sopen11g026130 Solanum pennellii HOM05D000875 ORTHO05D000684 4.4e-07 59.7 278 29.5
TPR.G28209 Trifolium pratense HOM05D000875 ORTHO05D000684 4.4e-07 59.7 281 29.5
TAR623G0673 Trochodendron aralioides HOM05D000875 ORTHO05D000684 5.7e-07 59.3 207 31.9
Hma1.2p1_0624F.1_g191210 Hydrangea macrophylla HOM05D000875 ORTHO05D000684 7.5e-07 58.9 212 33.0
Hma1.2p1_2442F.1_g322270 Hydrangea macrophylla HOM05D000875 ORTHO05D000684 7.5e-07 58.9 212 33.0
BcaB02g10152 Brassica carinata HOM05D000875 ORTHO05D000684 9.7e-07 58.5 260 30.4
Cpa.g.sc476.3 Carica papaya HOM05D000875 ORTHO05D000684 9.7e-07 58.5 279 28.7
Gorai.003G146100 Gossypium raimondii HOM05D000875 ORTHO05D000684 9.7e-07 58.5 279 30.5
ATR0113G010 Amborella trichopoda HOM05D000875 ORTHO05D000684 1.3e-06 58.2 99 41.4
QL01p033342 Quercus lobata HOM05D000875 ORTHO05D000684 1.3e-06 58.2 186 32.3
Zm00001eb053610 Zea mays HOM05D000875 ORTHO05D000684 1.3e-06 58.2 201 30.8
arahy.Tifrunner.gnm1.ann1.FG2BU7 Arachis hypogaea HOM05D000875 ORTHO05D000684 1.7e-06 57.8 243 29.6
Duzib168G0123 Durio zibethinus HOM05D000875 ORTHO05D000684 1.7e-06 57.8 256 30.9
SEGI_35961 Sequoiadendron giganteum HOM05D000875 ORTHO05D000684 1.7e-06 57.8 95 40.0
CSS0044092 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 2.2e-06 57.4 282 29.1
CSS0045254 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 2.2e-06 57.4 282 29.1
Nn2g13840 Nelumbo nucifera HOM05D000875 ORTHO05D000684 2.2e-06 57.4 251 31.5
Psat5g253440 Pisum sativum HOM05D000875 ORTHO05D000684 2.8e-06 57.0 254 29.9
THA.LOC104800576 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 2.8e-06 57.0 277 29.6
Dinv16218 Davidia involucrata HOM05D000875 ORTHO05D000684 3.7e-06 56.6 251 31.5
Gohir.D03G139400 Gossypium hirsutum HOM05D000875 ORTHO05D000684 3.7e-06 56.6 279 30.5
arahy.Tifrunner.gnm1.ann1.9K9ZRS Arachis hypogaea HOM05D000875 ORTHO05D000684 4.8e-06 56.2 234 29.1
Actinidia03693 Actinidia chinensis HOM05D000875 ORTHO05D000684 6.3e-06 55.8 264 31.8
Cc01_g10330 Coffea canephora HOM05D000875 ORTHO05D000684 6.3e-06 55.8 254 30.3
Os03g0192300 Oryza sativa ssp. japonica HOM05D000875 ORTHO05D000684 6.3e-06 55.8 81 46.9
Lalb_Chr01g0004581 Lupinus albus HOM05D000875 ORTHO05D000684 8.2e-06 55.5 287 28.6
Sp6g21460 Schrenkiella parvula HOM05D000875 ORTHO05D000684 8.2e-06 55.5 266 29.3


User provided reference genes

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