Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 9.0e-17 89.7 67 100.0
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 3.0e-12 74.7 67 77.6
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.0e-12 74.7 67 85.1
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 8.7e-12 73.2 67 77.6
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 8.7e-12 73.2 67 74.6
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.1e-11 72.8 67 74.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.9e-11 72.0 67 79.1
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.9e-11 72.0 67 85.1
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.5e-11 71.6 67 77.6
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 2.5e-11 71.6 66 81.8
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.3e-11 71.2 67 79.1
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 3.3e-11 71.2 66 63.6
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 3.3e-11 71.2 66 63.6
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 3.3e-11 71.2 66 63.6
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 3.3e-11 71.2 67 62.7
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 4.3e-11 70.9 66 63.6
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.6e-11 70.5 67 73.1
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 5.6e-11 70.5 67 61.2
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 9.6e-11 69.7 67 68.7
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 9.6e-11 69.7 66 68.2
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.3e-10 69.3 66 62.1
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.6e-10 68.9 66 62.1
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 2.1e-10 68.6 64 60.9
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 2.8e-10 68.2 67 80.6
Sopen02g015850 Solanum pennellii HOM05D002873 ORTHO05D002978 2.8e-10 68.2 67 80.6
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.8e-10 67.4 66 69.7
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 6.2e-10 67.0 66 81.8
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 8.2e-10 66.6 67 58.2
Nitab4.5_0012845g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 8.2e-10 66.6 67 77.6
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 8.2e-10 66.6 66 59.1
Migut.N00988 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.4e-09 65.9 67 80.6
Glyma.18G278600 Glycine max HOM05D002873 ORTHO05D002978 1.8e-09 65.5 62 75.8
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 1.8e-09 65.5 66 80.3
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 76.1
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 76.1
Migut.N00991 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.4e-09 65.1 67 80.6
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 3.1e-09 64.7 66 72.7
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 3.1e-09 64.7 66 65.2
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.1e-09 64.7 66 72.7
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.1e-09 64.7 66 72.7
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 3.1e-09 64.7 66 77.3
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 4.0e-09 64.3 66 74.2
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 4.0e-09 64.3 67 55.2
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 82.1
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 82.1
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 5.3e-09 63.9 62 58.1
Ca_20748_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 5.3e-09 63.9 65 81.5
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.3e-09 63.9 66 68.2
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 5.3e-09 63.9 64 62.5
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 5.3e-09 63.9 66 75.8
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 65.7
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.3e-09 63.9 67 80.6
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 6.9e-09 63.5 64 67.2
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 6.9e-09 63.5 66 54.5
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 9.0e-09 63.2 67 56.7
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 9.0e-09 63.2 66 68.2
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 9.0e-09 63.2 66 68.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 1.2e-08 62.8 66 57.6
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 1.5e-08 62.4 61 82.0
vmacro18088 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 1.5e-08 62.4 67 79.1
C09p43800 Brassica napus HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 75.8
BolC9t57265H Brassica oleracea HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 75.8
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 2.0e-08 62.0 66 71.2
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 2.0e-08 62.0 65 60.0
Nitab4.5_0001324g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 79.1
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 2.0e-08 62.0 67 74.6
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 2.6e-08 61.6 66 59.1
PGSC0003DMG400010052 Solanum tuberosum HOM05D002873 ORTHO05D002978 2.6e-08 61.6 67 80.6
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 2.6e-08 61.6 66 78.8
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 3.4e-08 61.2 67 73.1
A10p11190 Brassica napus HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 74.2
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 4.5e-08 60.8 67 53.7
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 72.7
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 5.8e-08 60.5 67 52.2
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 52.3
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 52.3
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 5.8e-08 60.5 66 51.5
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 5.8e-08 60.5 66 51.5
THA.LOC109116986 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 5.8e-08 60.5 65 69.2
BcaB08g35740 Brassica carinata HOM05D002873 ORTHO05D002978 7.6e-08 60.1 66 74.2
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 7.6e-08 60.1 65 69.2
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 7.6e-08 60.1 66 63.6
BraA10t43210Z Brassica rapa HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 71.2
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 1.0e-07 59.7 66 51.5
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 1.0e-07 59.7 62 58.1
Hma1.2p1_0588F.1_g184450 Hydrangea macrophylla HOM05D002873 ORTHO05D002978 1.0e-07 59.7 64 71.9
Thhalv10015216m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.3e-07 59.3 65 70.8
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.3e-07 59.3 65 75.4
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 1.3e-07 59.3 67 76.1
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 1.7e-07 58.9 67 52.2
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 53.0
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 50.0
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 50.0
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 50.0
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 53.0
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 1.7e-07 58.9 67 52.2
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 1.7e-07 58.9 64 54.7
Cc07_g04790 Coffea canephora HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 77.6
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 2.2e-07 58.5 67 52.2
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 2.2e-07 58.5 69 65.2
Solyc02g089590.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 2.9e-07 58.2 67 76.1
AL8G28870 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 3.8e-07 57.8 66 71.2
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 3.8e-07 57.8 58 86.2
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.9e-07 57.4 67 67.2
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 4.9e-07 57.4 65 61.5
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 4.9e-07 57.4 65 61.5
MELO3C005501.2 Cucumis melo HOM05D002873 ORTHO05D002978 4.9e-07 57.4 66 72.7
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 4.9e-07 57.4 66 50.0
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 6.5e-07 57.0 62 48.4
vmacro18087 Vaccinium macrocarpon HOM05D002873 ORTHO05D002978 6.5e-07 57.0 67 76.1
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 8.4e-07 56.6 66 56.1
AT5G53820 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 1.1e-06 56.2 66 66.7
CARHR266960 Cardamine hirsuta HOM05D002873 ORTHO05D002978 1.9e-06 55.5 65 72.3
CiPaw.03G007000 Carya illinoinensis HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 70.1
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 2.5e-06 55.1 61 52.5
Rhsim08G0081200 Rhododendron simsii HOM05D002873 ORTHO05D002978 2.5e-06 55.1 67 76.1
Sopen02g034310 Solanum pennellii HOM05D002873 ORTHO05D002978 2.5e-06 55.1 67 74.6
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 3.2e-06 54.7 67 73.1
FvH4_6g45802 Fragaria vesca HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 75.8
FAN05G0873 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 75.8
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 3.2e-06 54.7 34 85.3
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.2e-06 54.7 66 54.5
Lj1g0022638 Lotus japonicus HOM05D002873 ORTHO05D002978 4.2e-06 54.3 63 63.5
Aa31LG9G16900 Aethionema arabicum HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 75.4
Duzib268G0192 Durio zibethinus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 72.7
Lalb_Chr06g0174781 Lupinus albus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 65 75.4
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 5.5e-06 53.9 34 82.4
Potri.004G106350 Populus trichocarpa HOM05D002873 ORTHO05D002978 5.5e-06 53.9 60 66.7
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 60.6
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 7.1e-06 53.5 66 48.5
Cfa018418 Carpinus fangiana HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 67.2
HanXRQChr12g0380071 Helianthus annuus HOM05D021913 ORTHO05D002978 7.1e-06 53.5 67 67.2
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 7.1e-06 53.5 67 70.1
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 9.3e-06 53.1 65 56.9
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 9.3e-06 53.1 65 56.9
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 9.3e-06 53.1 65 56.9
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 9.3e-06 53.1 63 47.6


User provided reference genes

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