Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015447g0010 Nicotiana tabacum HOM05D001166 ORTHO05D000992 9.0e-52 206.8 120 100.0
Solyc01g011350.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 3.9e-39 164.9 119 75.6
Sopen01g007380 Solanum pennellii HOM05D001166 ORTHO05D000992 3.9e-39 164.9 119 75.6
PGSC0003DMG400005305 Solanum tuberosum HOM05D001166 ORTHO05D000992 3.9e-39 164.9 119 76.5
CAN.G59.2 Capsicum annuum HOM05D001166 ORTHO05D000992 2.8e-37 158.7 120 71.7
CAN.G194.24 Capsicum annuum HOM05D001166 ORTHO05D000992 5.5e-33 144.4 120 65.8
Nitab4.5_0000069g0050 Nicotiana tabacum HOM05D001166 ORTHO05D000992 8.0e-32 140.6 119 75.6
PGSC0003DMG401026765 Solanum tuberosum HOM05D001166 ORTHO05D000992 8.0e-32 140.6 117 64.1
Solyc04g008690.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 7.4e-30 134.0 117 61.5
Sopen04g003860 Solanum pennellii HOM05D001166 ORTHO05D000992 7.4e-30 134.0 117 61.5
Peaxi162Scf00315g00026 Petunia axillaris HOM05D001166 ORTHO05D000992 3.1e-28 128.6 124 71.0
Nitab4.5_0001419g0080 Nicotiana tabacum HOM05D001166 ORTHO05D000992 5.9e-27 124.4 110 60.0
Nitab4.5_0000129g0250 Nicotiana tabacum HOM05D001166 ORTHO05D000992 2.9e-26 122.1 110 60.0
Atru.chr11.1094 Acer truncatum HOM05D001166 ORTHO05D000992 7.0e-20 100.9 125 51.2
Prupe.1G343800 Prunus persica HOM05D001166 ORTHO05D000992 9.1e-20 100.5 127 48.0
Lj3A852T51 Lonicera japonica HOM05D001166 ORTHO05D000992 2.9e-18 95.5 129 47.3
MD16G1006900 Malus domestica HOM05D001166 ORTHO05D000992 8.5e-18 94.0 127 47.2
MD13G1008900 Malus domestica HOM05D001166 ORTHO05D000992 1.1e-17 93.6 116 48.3
TPR.G14836 Trifolium pratense HOM05D001166 ORTHO05D000992 1.1e-17 93.6 128 47.7
Sc15g0002450 Simmondsia chinensis HOM05D001166 ORTHO05D000992 2.5e-17 92.4 129 49.6
Cfa015130 Carpinus fangiana HOM05D001166 ORTHO05D000992 3.2e-17 92.0 129 48.1
Medtr1g035700 Medicago truncatula HOM05D001166 ORTHO05D000992 3.2e-17 92.0 128 46.9
Peaxi162Scf00329g00514 Petunia axillaris HOM05D001166 ORTHO05D000992 7.2e-17 90.9 123 53.7
Psat6g098440 Pisum sativum HOM05D001166 ORTHO05D000992 7.2e-17 90.9 129 49.6
EL10Ac9g22866 Beta vulgaris HOM05D001166 ORTHO05D000992 9.4e-17 90.5 128 45.3
vmacro10767 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 1.2e-16 90.1 129 46.5
Hma1.2p1_0122F.1_g057580 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 1.6e-16 89.7 127 45.7
Rhsim09G0077500 Rhododendron simsii HOM05D001166 ORTHO05D000992 1.6e-16 89.7 129 45.7
AUR62015162 Chenopodium quinoa HOM05D001166 ORTHO05D000992 2.1e-16 89.4 129 45.7
AUR62017614 Chenopodium quinoa HOM05D001166 ORTHO05D000992 2.1e-16 89.4 129 45.7
Ca_03051_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 2.1e-16 89.4 129 46.5
Ca_12511_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 3.6e-16 88.6 128 44.5
FAN07G1414 Fragaria x ananassa HOM05D001166 ORTHO05D000992 3.6e-16 88.6 127 53.5
FAN17G1357 Fragaria x ananassa HOM05D001166 ORTHO05D000992 3.6e-16 88.6 130 46.9
Lalb_Chr01g0001641 Lupinus albus HOM05D001166 ORTHO05D000992 1.0e-15 87.0 128 44.5
Actinidia11791 Actinidia chinensis HOM05D001166 ORTHO05D000992 1.4e-15 86.7 130 47.7
FAN22G0469 Fragaria x ananassa HOM05D001166 ORTHO05D000992 1.4e-15 86.7 127 52.0
Oeu039423.1 Olea europaea HOM05D001166 ORTHO05D000992 1.4e-15 86.7 129 46.5
Haze_01544 Corylus avellana HOM05D001166 ORTHO05D000992 1.8e-15 86.3 129 48.1
Psat7g174600 Pisum sativum HOM05D001166 ORTHO05D000992 2.3e-15 85.9 114 45.6
RcHm_v2.0_Chr4g0446241 Rosa chinensis HOM05D001166 ORTHO05D000992 2.3e-15 85.9 127 55.1
Lj3g0012955 Lotus japonicus HOM05D001166 ORTHO05D000992 3.0e-15 85.5 129 46.5
Actinidia04100 Actinidia chinensis HOM05D001166 ORTHO05D000992 4.0e-15 85.1 129 45.7
DCAR_030342 Daucus carota HOM05D001166 ORTHO05D000992 4.0e-15 85.1 127 44.1
Phvul.011G032900 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 6.8e-15 84.3 129 43.4
Lalb_Chr03g0024981 Lupinus albus HOM05D001166 ORTHO05D000992 2.6e-14 82.4 128 41.4
FvH4_4g36480 Fragaria vesca HOM05D001166 ORTHO05D000992 3.4e-14 82.0 127 51.2
FAN12G3346 Fragaria x ananassa HOM05D001166 ORTHO05D000992 3.4e-14 82.0 127 51.2
Glyma.12G029900 Glycine max HOM05D001166 ORTHO05D000992 3.4e-14 82.0 127 41.7
SalBow2G0753 Salvia bowleyana HOM05D001166 ORTHO05D000992 3.4e-14 82.0 121 41.3
CiPaw.05G166200 Carya illinoinensis HOM05D001166 ORTHO05D000992 4.4e-14 81.6 130 49.2
Potri.010G097000 Populus trichocarpa HOM05D001166 ORTHO05D000992 4.4e-14 81.6 132 45.5
arahy.Tifrunner.gnm1.ann1.6PC78S Arachis hypogaea HOM05D001166 ORTHO05D000992 5.7e-14 81.3 129 45.0
arahy.Tifrunner.gnm1.ann1.ACP295 Arachis hypogaea HOM05D001166 ORTHO05D000992 5.7e-14 81.3 129 45.0
Glyma.11G104900 Glycine max HOM05D001166 ORTHO05D000992 5.7e-14 81.3 128 43.0
arahy.Tifrunner.gnm1.ann1.1H2TTJ Arachis hypogaea HOM05D001166 ORTHO05D000992 9.8e-14 80.5 129 45.0
Sed0027739 Sechium edule HOM05D001166 ORTHO05D000992 9.8e-14 80.5 129 47.3
Hund08338 Selenicereus undatus HOM05D001166 ORTHO05D000992 9.8e-14 80.5 116 44.0
Ciclev10005493m.g Citrus clementina HOM05D001166 ORTHO05D000992 1.3e-13 80.1 106 45.3
VMungo1127G0199 Vigna mungo HOM05D001166 ORTHO05D000992 1.3e-13 80.1 108 44.4
CiPaw.06G057300 Carya illinoinensis HOM05D001166 ORTHO05D000992 2.8e-13 79.0 110 48.2
ECA246G0438 Erigeron canadensis HOM05D001166 ORTHO05D000992 2.8e-13 79.0 123 45.5
ClCG01G007070 Citrullus lanatus HOM05D001166 ORTHO05D000992 3.7e-13 78.6 128 47.7
Ah.01g013240 Amaranthus hybridus HOM05D001166 ORTHO05D000992 1.1e-12 77.0 117 44.4
CsaV3_5G017490 Cucumis sativus L. HOM05D001166 ORTHO05D000992 1.1e-12 77.0 128 47.7
HanXRQChr08g0209291 Helianthus annuus HOM05D001166 ORTHO05D000992 1.4e-12 76.6 111 46.8
Lsat_1_v5_gn_3_34220 Lactuca sativa HOM05D001166 ORTHO05D000992 1.4e-12 76.6 123 43.9
MELO3C005207.2 Cucumis melo HOM05D001166 ORTHO05D000992 1.8e-12 76.3 127 47.2
Medtr4g074120 Medicago truncatula HOM05D001166 ORTHO05D000992 2.4e-12 75.9 126 43.7
Lj6C722G8 Lonicera japonica HOM05D001166 ORTHO05D000992 3.1e-12 75.5 128 41.4
Thecc.02G310400 Theobroma cacao HOM05D001166 ORTHO05D000992 4.1e-12 75.1 124 43.5
Duzib251G0546 Durio zibethinus HOM05D001166 ORTHO05D000992 5.4e-12 74.7 124 41.9
QL03p042949 Quercus lobata HOM05D001166 ORTHO05D000992 7.0e-12 74.3 111 49.5
CANSAT78G1388 Cannabis sativa HOM05D001166 ORTHO05D000992 9.1e-12 73.9 131 43.5
Dinv02963 Davidia involucrata HOM05D001166 ORTHO05D000992 9.1e-12 73.9 129 45.0
Hund24257 Selenicereus undatus HOM05D001166 ORTHO05D000992 9.1e-12 73.9 118 44.1
Sed0016866 Sechium edule HOM05D001166 ORTHO05D000992 1.6e-11 73.2 129 42.6
TWI77G0708 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 1.6e-11 73.2 130 46.2
Glyma.09G281000 Glycine max HOM05D001166 ORTHO05D000992 2.0e-11 72.8 126 41.3
Manes.07G075900 Manihot esculenta HOM05D001166 ORTHO05D000992 2.0e-11 72.8 116 38.8
Eucgr.G01993 Eucalyptus grandis HOM05D001166 ORTHO05D000992 2.7e-11 72.4 120 41.7
Lsat_1_v5_gn_4_26281 Lactuca sativa HOM05D001166 ORTHO05D000992 2.7e-11 72.4 116 39.7
Lalb_Chr19g0139271 Lupinus albus HOM05D001166 ORTHO05D000992 2.7e-11 72.4 127 42.5
Migut.L00783 Erythranthe guttata HOM05D001166 ORTHO05D000992 3.5e-11 72.0 96 44.8
Gorai.008G171100 Gossypium raimondii HOM05D001166 ORTHO05D000992 3.5e-11 72.0 105 46.7
Lalb_Chr10g0095101 Lupinus albus HOM05D001166 ORTHO05D000992 3.5e-11 72.0 116 37.1
GSVIVG01010225001 Vitis vinifera HOM05D001166 ORTHO05D000992 4.5e-11 71.6 64 54.7
SGA_v2.0_scaffold65G22210 Striga asiatica HOM05D001166 ORTHO05D000992 5.9e-11 71.2 120 39.2
TPR.G21569 Trifolium pratense HOM05D001166 ORTHO05D000992 7.7e-11 70.9 127 39.4
DCAR_023503 Daucus carota HOM05D001166 ORTHO05D000992 1.0e-10 70.5 126 38.9
Gohir.A12G155200 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.0e-10 70.5 105 45.7
Gohir.D12G158300 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.0e-10 70.5 105 45.7
Dinv02666 Davidia involucrata HOM05D001166 ORTHO05D000992 1.3e-10 70.1 129 48.1
Dinv02667 Davidia involucrata HOM05D001166 ORTHO05D000992 1.3e-10 70.1 129 48.1
Manes.10G068800 Manihot esculenta HOM05D001166 ORTHO05D000992 1.7e-10 69.7 114 39.5
TWI74G0027 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 2.3e-10 69.3 130 43.1
COL.COLO4_27649 Corchorus olitorius HOM05D001166 ORTHO05D000992 3.8e-10 68.6 127 42.5
ECA234G1877 Erigeron canadensis HOM05D001166 ORTHO05D000992 3.8e-10 68.6 115 42.6
MSTRG.13666 Avicennia marina HOM05D001166 ORTHO05D000992 5.0e-10 68.2 97 41.2
unitig_699.g19642 Utricularia gibba HOM05D001166 ORTHO05D000992 5.0e-10 68.2 61 54.1
Eucgr.G02013 Eucalyptus grandis HOM05D001166 ORTHO05D000992 8.6e-10 67.4 120 39.2
HanXRQChr17g0565521 Helianthus annuus HOM05D001166 ORTHO05D000992 1.5e-09 66.6 120 39.2
Lsat_1_v5_gn_8_32640 Lactuca sativa HOM05D001166 ORTHO05D000992 1.5e-09 66.6 121 38.0
Sabra10G0069500 Salix brachista HOM05D001166 ORTHO05D000992 2.5e-09 65.9 46 69.6
Cpa.g.sc2.106 Carica papaya HOM05D001166 ORTHO05D000992 5.5e-09 64.7 130 40.0
Glyma.20G005200 Glycine max HOM05D001166 ORTHO05D000992 7.2e-09 64.3 120 40.0
PGR031G3992 Punica granatum HOM05D001166 ORTHO05D000992 7.2e-09 64.3 63 54.0
Potri.008G145100 Populus trichocarpa HOM05D001166 ORTHO05D000992 9.5e-09 63.9 132 47.7
MSTRG.2080 Avicennia marina HOM05D001166 ORTHO05D000992 1.2e-08 63.5 103 39.8
Gorai.005G151600 Gossypium raimondii HOM05D001166 ORTHO05D000992 1.2e-08 63.5 125 38.4
Sabra08G0110100 Salix brachista HOM05D001166 ORTHO05D000992 1.2e-08 63.5 132 40.2
THA.LOC104808054 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 2.1e-08 62.8 127 37.0
Cc11_g00010 Coffea canephora HOM05D001166 ORTHO05D000992 2.8e-08 62.4 39 66.7
PSO017G6322 Papaver somniferum HOM05D001166 ORTHO05D000992 4.7e-08 61.6 126 40.5
unitig_52.g17302 Utricularia gibba HOM05D001166 ORTHO05D000992 4.7e-08 61.6 63 50.8
Migut.E00662 Erythranthe guttata HOM05D001166 ORTHO05D000992 6.1e-08 61.2 36 66.7
Gohir.D02G135600 Gossypium hirsutum HOM05D001166 ORTHO05D000992 6.1e-08 61.2 125 37.6
Gohir.D13G025300 Gossypium hirsutum HOM05D001166 ORTHO05D000992 8.0e-08 60.8 61 49.2
Gorai.013G028500 Gossypium raimondii HOM05D001166 ORTHO05D000992 8.0e-08 60.8 61 49.2
CDE04G0690 Ceratophyllum demersum HOM05D001166 ORTHO05D000992 1.4e-07 60.1 122 36.9
TAR629G0680 Trochodendron aralioides HOM05D001166 ORTHO05D000992 1.4e-07 60.1 36 72.2
CDE02G2455 Ceratophyllum demersum HOM05D001166 ORTHO05D000992 3.0e-07 58.9 66 43.9
Duzib248G1020 Durio zibethinus HOM05D001166 ORTHO05D000992 3.0e-07 58.9 137 39.4
Gohir.A13G026500 Gossypium hirsutum HOM05D001166 ORTHO05D000992 4.0e-07 58.5 60 48.3
SGA_v2.0_scaffold80G25960 Striga asiatica HOM05D001166 ORTHO05D000992 4.0e-07 58.5 38 65.8
PSO478G0605 Papaver somniferum HOM05D001166 ORTHO05D000992 5.2e-07 58.2 128 36.7
Thhalv10018953m.g Eutrema salsugineum HOM05D001166 ORTHO05D000992 6.8e-07 57.8 127 37.8
Nn4g24885 Nelumbo nucifera HOM05D001166 ORTHO05D000992 6.8e-07 57.8 36 69.4
Duzib268G1700 Durio zibethinus HOM05D001166 ORTHO05D000992 8.9e-07 57.4 126 38.9
HanXRQChr16g0526721 Helianthus annuus HOM05D001166 ORTHO05D000992 1.2e-06 57.0 112 39.3
MBI03_g05128_MAGBIO Magnolia biondii HOM05D001166 ORTHO05D000992 1.5e-06 56.6 127 40.2
SalBow2G0002 Salvia bowleyana HOM05D001166 ORTHO05D000992 2.0e-06 56.2 36 63.9
Migut.E00602 Erythranthe guttata HOM05D001166 ORTHO05D000992 2.6e-06 55.8 128 35.2
Gohir.A03G111000 Gossypium hirsutum HOM05D001166 ORTHO05D000992 7.5e-06 54.3 95 38.9
THA.LOC104823657 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 9.8e-06 53.9 110 40.0


User provided reference genes

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