Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015422g0020 Nicotiana tabacum HOM05D007829 ORTHO05D009903 1.5e-107 392.9 196 100.0
Peaxi162Scf00352g00215 Petunia axillaris HOM05D007829 ORTHO05D009903 1.8e-36 156.8 125 69.6
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 9.6e-35 151.0 259 42.5
Solyc11g012310.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 4.8e-10 68.9 59 64.4
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 1.5e-08 63.9 217 25.3
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 2.0e-08 63.5 63 49.2
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 4.5e-08 62.4 43 62.8
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 4.5e-08 62.4 69 44.9
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 7.7e-08 61.6 59 57.6
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 1.3e-07 60.8 43 62.8
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 1.3e-07 60.8 80 43.8
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 1.7e-07 60.5 60 50.0
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 2.2e-07 60.1 32 87.5
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 2.9e-07 59.7 54 55.6
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 2.9e-07 59.7 43 60.5
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 3.8e-07 59.3 128 35.2
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 3.8e-07 59.3 43 60.5
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 5.0e-07 58.9 72 41.7
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 5.0e-07 58.9 135 31.1
Medtr2g025760 Medicago truncatula HOM05D007829 ORTHO05D009903 8.5e-07 58.2 109 31.2
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 1.4e-06 57.4 75 42.7
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 1.9e-06 57.0 41 58.5
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 2.5e-06 56.6 37 64.9
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 3.2e-06 56.2 77 39.0
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 4.2e-06 55.8 44 54.5
Eucgr.D01411 Eucalyptus grandis HOM05D007829 ORTHO05D009903 5.5e-06 55.5 37 62.2
Cfa000096 Carpinus fangiana HOM05D007829 ORTHO05D009903 7.2e-06 55.1 56 48.2
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 7.2e-06 55.1 63 46.0
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 7.2e-06 55.1 63 46.0
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 7.2e-06 55.1 63 46.0
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 7.2e-06 55.1 52 46.2
Duzib235G0645 Durio zibethinus HOM05D007829 ORTHO05D009903 9.4e-06 54.7 132 34.1
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 9.4e-06 54.7 64 46.9


User provided reference genes

Program Settings