Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.6e-166 589.3 301 100.0
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 8.4e-155 550.4 290 96.9
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 3.4e-132 475.3 298 82.2
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 5.8e-132 474.6 298 81.9
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 3.5e-129 465.3 294 83.0
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 7.6e-116 421.0 286 75.2
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 5.9e-100 368.2 294 65.3
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 1.9e-98 363.2 300 64.3
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 2.7e-97 359.4 235 79.1
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.8e-96 356.7 294 63.9
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 3.6e-89 332.4 292 61.6
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 2.6e-87 326.2 292 60.3
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 2.9e-83 312.8 310 55.8
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 3.6e-81 305.8 306 53.3
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 9.1e-77 291.2 306 52.0
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 2.0e-76 290.0 318 51.6
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 2.9e-75 286.2 299 53.2
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 6.6e-75 285.0 308 51.9
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 2.1e-73 280.0 302 49.3
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 2.3e-72 276.6 324 47.8
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 2.2e-70 270.0 293 56.0
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.7e-70 269.2 305 50.5
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 8.3e-70 268.1 303 52.1
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 8.3e-70 268.1 305 50.2
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 8.3e-70 268.1 306 49.7
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 8.3e-70 268.1 303 50.5
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.1e-69 267.7 305 49.2
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.8e-69 266.9 305 49.5
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 7.0e-69 265.0 304 49.7
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 9.2e-69 264.6 308 48.4
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 9.2e-69 264.6 299 49.5
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.2e-68 264.2 305 49.2
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.2e-68 264.2 298 51.7
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.6e-68 263.8 303 48.5
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 2.7e-68 263.1 305 47.9
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 7.8e-68 261.5 305 47.9
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.0e-67 261.2 308 48.4
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 5.0e-67 258.8 302 49.0
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 6.6e-67 258.5 305 48.9
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 1.1e-66 257.7 320 47.2
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.9e-66 256.9 302 49.0
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 2.5e-66 256.5 307 47.2
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 7.3e-66 255.0 304 50.0
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 1.6e-65 253.8 300 49.7
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 2.1e-65 253.4 302 49.3
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.8e-65 253.1 301 48.5
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 8.0e-65 251.5 295 48.8
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 1.0e-64 251.1 300 47.3
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 2.6e-63 246.5 301 45.5
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 2.6e-63 246.5 292 49.7
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 4.4e-63 245.7 304 46.4
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 4.4e-63 245.7 308 46.1
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 7.5e-63 245.0 306 47.7
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.7e-62 243.8 295 47.5
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 2.9e-62 243.0 305 47.2
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 3.7e-62 242.7 334 44.6
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 4.9e-62 242.3 335 44.5
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 4.9e-62 242.3 308 48.4
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 6.4e-62 241.9 308 46.4
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 8.3e-62 241.5 298 48.0
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 1.1e-61 241.1 307 46.6
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.1e-61 241.1 299 47.8
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.4e-61 240.7 317 47.0
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 5.4e-61 238.8 305 45.9
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 5.4e-61 238.8 307 44.3
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 7.0e-61 238.4 305 44.9
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 4.6e-60 235.7 313 45.4
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 1.0e-59 234.6 300 45.3
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 1.0e-59 234.6 308 46.8
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.1e-58 231.1 300 44.7
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 2.5e-58 229.9 310 45.8
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 5.6e-58 228.8 305 45.9
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 7.3e-58 228.4 301 44.5
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 7.3e-58 228.4 310 45.5
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 3.6e-57 226.1 301 43.2
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 4.7e-57 225.7 301 44.2
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 6.2e-57 225.3 316 44.3
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 2.0e-55 220.3 302 43.7
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 2.0e-55 220.3 295 44.7
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.0e-55 220.3 295 44.7
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 2.0e-55 220.3 308 44.8
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 2.6e-55 219.9 302 44.0
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 3.4e-55 219.5 301 43.2
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 4.4e-55 219.2 296 46.6
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 1.7e-54 217.2 301 42.5
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 2.9e-54 216.5 300 43.3
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 3.7e-54 216.1 313 44.1
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.9e-54 215.7 295 44.4
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 6.4e-54 215.3 313 44.7
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.4e-53 213.4 310 44.8
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 2.7e-52 209.9 300 41.7
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.5e-52 209.5 302 45.7
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 1.3e-51 207.6 187 57.2
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 1.3e-51 207.6 307 41.7
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.9e-51 206.1 293 45.7
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 6.2e-49 198.7 307 40.4
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.1e-48 198.0 274 43.4
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 4.0e-48 196.1 297 42.1
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 6.8e-48 195.3 181 55.2
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.2e-47 194.5 295 44.7
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 4.4e-47 192.6 181 55.8
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 3.2e-37 159.8 315 39.0
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 1.2e-33 147.9 184 44.0
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 9.0e-32 141.7 294 33.3
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 6.4e-30 135.6 376 29.3
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 3.5e-28 129.8 336 31.2
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.4e-24 117.9 120 49.2
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 5.3e-24 115.9 294 33.3
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 4.9e-22 109.4 296 33.4
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 1.2e-20 104.8 144 47.2
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.3e-19 100.5 292 31.5
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 1.6e-17 94.4 161 37.9
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 2.4e-16 90.5 197 34.0
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 3.1e-16 90.1 80 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 6.9e-16 89.0 378 25.4
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 4.5e-15 86.3 79 54.4
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 9.3e-13 78.6 79 55.7
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 2.7e-12 77.0 79 49.4
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 6.0e-12 75.9 103 49.5
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 1.0e-11 75.1 56 60.7
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 1.8e-11 74.3 334 25.1
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 1.5e-07 61.2 70 40.0


User provided reference genes

Program Settings