Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0015019g0020 Nicotiana tabacum HOM05D001719 ORTHO05D008883 3.7e-57 224.6 107 100.0
Nitab4.5_0000113g0310 Nicotiana tabacum HOM05D001719 ORTHO05D008883 6.2e-44 180.6 97 88.7
Nitab4.5_0004308g0070 Nicotiana tabacum HOM05D001719 ORTHO05D008883 1.1e-43 179.9 97 87.6
PGSC0003DMG400030992 Solanum tuberosum HOM05D001719 ORTHO05D008883 1.4e-40 169.5 97 85.6
CAN.G376.6 Capsicum annuum HOM05D001719 ORTHO05D008883 1.0e-38 163.3 97 82.5
Peaxi162Scf00338g00228 Petunia axillaris HOM05D001719 ORTHO05D008883 2.3e-38 162.2 102 79.4
Dinv24861 Davidia involucrata HOM05D001719 ORTHO05D008883 3.1e-35 151.8 97 76.3
Sopen05g001600 Solanum pennellii HOM05D001719 ORTHO05D008883 1.9e-32 142.5 89 80.9
TAR374G1145 Trochodendron aralioides HOM05D001719 ORTHO05D008883 2.1e-31 139.0 100 72.0
GSVIVG01020239001 Vitis vinifera HOM05D001719 ORTHO05D008883 2.7e-31 138.7 94 71.3
Cc11_g14650 Coffea canephora HOM05D001719 ORTHO05D008883 6.6e-30 134.0 89 71.9
CSS0013957 Camellia sinensis var. sinensis HOM05D001719 ORTHO05D008883 8.7e-30 133.7 95 70.5
PSO478G2278 Papaver somniferum HOM05D001719 ORTHO05D008883 1.1e-29 133.3 85 74.1
Ciclev10031376m.g Citrus clementina HOM05D001719 ORTHO05D008883 1.5e-29 132.9 103 64.1
Solyc02g044020.3 Solanum lycopersicum HOM05D001719 ORTHO05D008883 1.3e-28 129.8 70 87.1
Atru.chr11.2017 Acer truncatum HOM05D001719 ORTHO05D008883 1.6e-28 129.4 94 68.1
Oeu056396.1 Olea europaea HOM05D001719 ORTHO05D008883 1.6e-28 129.4 88 72.7
CANSAT01G1716 Cannabis sativa HOM05D001719 ORTHO05D008883 2.1e-28 129.0 87 72.4
Cpa.g.sc69.29 Carica papaya HOM05D001719 ORTHO05D008883 2.1e-28 129.0 87 72.4
Migut.L01411 Erythranthe guttata HOM05D001719 ORTHO05D008883 2.8e-28 128.6 96 66.7
Prupe.1G254200 Prunus persica HOM05D001719 ORTHO05D008883 3.6e-28 128.3 97 64.9
PSO017G3957 Papaver somniferum HOM05D001719 ORTHO05D008883 6.2e-28 127.5 85 71.8
Actinidia08166 Actinidia chinensis HOM05D001719 ORTHO05D008883 1.4e-27 126.3 95 67.4
FAN22G2343 Fragaria x ananassa HOM05D001719 ORTHO05D008883 2.4e-27 125.6 89 67.4
MD16G1092200 Malus domestica HOM05D001719 ORTHO05D008883 4.0e-27 124.8 96 62.5
SGA_v2.0_scaffold8G04225 Striga asiatica HOM05D001719 ORTHO05D008883 4.0e-27 124.8 112 54.5
FvH4_4g34530 Fragaria vesca HOM05D001719 ORTHO05D008883 5.3e-27 124.4 103 60.2
FAN12G4310 Fragaria x ananassa HOM05D001719 ORTHO05D008883 5.3e-27 124.4 103 60.2
arahy.Tifrunner.gnm1.ann1.CT1PYC Arachis hypogaea HOM05D001719 ORTHO05D008883 6.9e-27 124.0 92 65.2
arahy.Tifrunner.gnm1.ann1.I0S28J Arachis hypogaea HOM05D001719 ORTHO05D008883 6.9e-27 124.0 92 65.2
FAN07G1170 Fragaria x ananassa HOM05D001719 ORTHO05D008883 6.9e-27 124.0 89 66.3
COL.COLO4_36967 Corchorus olitorius HOM05D001719 ORTHO05D008883 9.0e-27 123.6 97 63.9
FAN17G0819 Fragaria x ananassa HOM05D001719 ORTHO05D008883 9.0e-27 123.6 89 66.3
RcHm_v2.0_Chr4g0443901 Rosa chinensis HOM05D001719 ORTHO05D008883 9.0e-27 123.6 91 67.0
Manes.12G029233 Manihot esculenta HOM05D001719 ORTHO05D008883 1.2e-26 123.2 97 59.8
PGR102G2178 Punica granatum HOM05D001719 ORTHO05D008883 1.2e-26 123.2 97 61.9
Aqoxy3G01006 Aquilegia oxysepala HOM05D001719 ORTHO05D008883 1.5e-26 122.9 87 69.0
Lalb_Chr05g0228161 Lupinus albus HOM05D001719 ORTHO05D008883 2.6e-26 122.1 97 60.8
Phvul.003G052100 Phaseolus vulgaris HOM05D001719 ORTHO05D008883 2.6e-26 122.1 97 63.9
CiPaw.06G072300 Carya illinoinensis HOM05D001719 ORTHO05D008883 3.4e-26 121.7 85 69.4
Gohir.A12G142700 Gossypium hirsutum HOM05D001719 ORTHO05D008883 4.5e-26 121.3 87 67.8
Gohir.D12G147500 Gossypium hirsutum HOM05D001719 ORTHO05D008883 4.5e-26 121.3 87 67.8
Gorai.008G158700 Gossypium raimondii HOM05D001719 ORTHO05D008883 4.5e-26 121.3 87 67.8
Thecc.02G248400 Theobroma cacao HOM05D001719 ORTHO05D008883 4.5e-26 121.3 87 69.0
Lj3C1052T11 Lonicera japonica HOM05D001719 ORTHO05D008883 5.8e-26 120.9 84 67.9
Hund25345 Selenicereus undatus HOM05D001719 ORTHO05D008883 5.8e-26 120.9 85 67.1
Psat4g125320 Pisum sativum HOM05D001719 ORTHO05D008883 9.9e-26 120.2 104 59.6
Lj4g0006314 Lotus japonicus HOM05D001719 ORTHO05D008883 1.3e-25 119.8 88 65.9
Cfa009141 Carpinus fangiana HOM05D001719 ORTHO05D008883 1.7e-25 119.4 91 64.8
AUR62014037 Chenopodium quinoa HOM05D001719 ORTHO05D008883 1.7e-25 119.4 86 66.3
RhsimUnG0091100 Rhododendron simsii HOM05D001719 ORTHO05D008883 2.9e-25 118.6 80 70.0
VMungo0251G2401 Vigna mungo HOM05D001719 ORTHO05D008883 2.9e-25 118.6 85 68.2
Medtr8g064490 Medicago truncatula HOM05D001719 ORTHO05D008883 3.8e-25 118.2 87 64.4
Ah.03g132670 Amaranthus hybridus HOM05D001719 ORTHO05D008883 6.4e-25 117.5 84 65.5
Duzib268G1537 Durio zibethinus HOM05D001719 ORTHO05D008883 6.4e-25 117.5 96 62.5
Potri.010G040700 Populus trichocarpa HOM05D001719 ORTHO05D008883 6.4e-25 117.5 89 62.9
MBI16_g26452_MAGBIO Magnolia biondii HOM05D001719 ORTHO05D008883 1.1e-24 116.7 84 70.2
QL03p061251 Quercus lobata HOM05D001719 ORTHO05D008883 1.1e-24 116.7 86 67.4
DCAR_031101 Daucus carota HOM05D001719 ORTHO05D008883 1.4e-24 116.3 87 65.5
Eucgr.B03346 Eucalyptus grandis HOM05D001719 ORTHO05D008883 1.4e-24 116.3 97 59.8
Glyma.08G287600 Glycine max HOM05D001719 ORTHO05D008883 1.4e-24 116.3 84 66.7
Rhsim12G0047100 Rhododendron simsii HOM05D001719 ORTHO05D008883 2.4e-24 115.5 80 68.8
THA.LOC104809600 Tarenaya hassleriana HOM05D001719 ORTHO05D008883 2.4e-24 115.5 88 63.6
Lsat_1_v5_gn_4_5880 Lactuca sativa HOM05D001719 ORTHO05D008883 4.2e-24 114.8 90 62.2
Sed0004749 Sechium edule HOM05D001719 ORTHO05D008883 9.3e-24 113.6 86 62.8
TWI36G1303 Tripterygium wilfordii HOM05D001719 ORTHO05D008883 1.2e-23 113.2 86 64.0
unitig_749.g13272 Utricularia gibba HOM05D001719 ORTHO05D008883 1.2e-23 113.2 83 67.5
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 1.6e-23 112.8 86 61.6
Thhalv10023456m.g Eutrema salsugineum HOM05D001719 ORTHO05D008883 1.6e-23 112.8 93 59.1
vmacro01181 Vaccinium macrocarpon HOM05D001719 ORTHO05D008883 1.6e-23 112.8 84 65.5
Ca_22727_v3 Cicer arietinum L. HOM05D001719 ORTHO05D008883 2.1e-23 112.5 103 59.2
Os01g0640800 Oryza sativa ssp. japonica HOM05D001719 ORTHO05D008883 2.1e-23 112.5 85 61.2
Sp2g04450 Schrenkiella parvula HOM05D001719 ORTHO05D008883 4.6e-23 111.3 84 61.9
SpUn0106_0020 Schrenkiella parvula HOM05D001719 ORTHO05D008883 4.6e-23 111.3 84 61.9
Sc14g0008630 Simmondsia chinensis HOM05D001719 ORTHO05D008883 4.6e-23 111.3 90 63.3
ECA234G2022 Erigeron canadensis HOM05D001719 ORTHO05D008883 6.0e-23 110.9 98 61.2
Zm00001eb359210 Zea mays HOM05D001719 ORTHO05D008883 6.0e-23 110.9 85 60.0
AT1G60230 Arabidopsis thaliana HOM05D001719 ORTHO05D008883 7.9e-23 110.5 86 62.8
BcaC04g22221 Brassica carinata HOM05D001719 ORTHO05D008883 7.9e-23 110.5 86 58.1
Nitab4.5_0002494g0050 Nicotiana tabacum HOM05D001719 ORTHO05D008883 1.0e-22 110.2 97 62.9
BcaB07g31206 Brassica carinata HOM05D001719 ORTHO05D008883 1.3e-22 109.8 86 58.1
BraA09t37392Z Brassica rapa HOM05D001719 ORTHO05D008883 1.3e-22 109.8 86 58.1
HanXRQChr12g0383481 Helianthus annuus HOM05D001719 ORTHO05D008883 1.3e-22 109.8 101 57.4
AL2G16430 Arabidopsis lyrata HOM05D001719 ORTHO05D008883 1.8e-22 109.4 103 55.3
A09p17620 Brassica napus HOM05D001719 ORTHO05D008883 1.8e-22 109.4 84 59.5
ATR0730G221 Amborella trichopoda HOM05D001719 ORTHO05D008883 2.3e-22 109.0 85 63.5
Sabra10G0026400 Salix brachista HOM05D001719 ORTHO05D008883 3.0e-22 108.6 109 52.3
C09p21950 Brassica napus HOM05D001719 ORTHO05D008883 3.9e-22 108.2 86 57.0
BolC9t55100H Brassica oleracea HOM05D001719 ORTHO05D008883 3.9e-22 108.2 86 57.0
Aa31LG2G10090 Aethionema arabicum HOM05D001719 ORTHO05D008883 5.1e-22 107.8 86 60.5
Carub.0002s0502 Capsella rubella HOM05D001719 ORTHO05D008883 6.7e-22 107.5 86 60.5
TPR.G32115 Trifolium pratense HOM05D001719 ORTHO05D008883 6.7e-22 107.5 71 69.0
EL10Ac6g13671 Beta vulgaris HOM05D002303 ORTHO05D006504 1.9e-21 105.9 89 60.7
HPP92_021345 Vanilla planifolia HOM05D001719 ORTHO05D008883 4.3e-21 104.8 84 59.5
ClCG08G018080 Citrullus lanatus HOM05D001719 ORTHO05D008883 5.6e-21 104.4 83 60.2
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 7.4e-21 104.0 87 57.5
Aa31LG1G15680 Aethionema arabicum HOM05D001719 ORTHO05D008883 1.2e-18 96.7 79 58.2
TAR374G0920 Trochodendron aralioides HOM05D001719 ORTHO05D008883 1.3e-17 93.2 61 73.8
Mapoly0003s0274 Marchantia polymorpha HOM05D001719 ORTHO05D008883 4.8e-12 74.7 84 42.9
Pp3c5_4340 Physcomitrium patens HOM05D001719 ORTHO05D008883 3.1e-11 72.0 85 44.7


User provided reference genes

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