Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-157 557.8 279 100.0
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-109 398.3 285 73.3
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-100 368.6 228 82.9
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-96 355.5 228 81.1
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-90 335.9 200 85.5
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-90 334.7 213 82.6
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-89 332.8 219 79.9
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-89 332.4 336 58.6
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-87 325.1 219 78.1
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-86 323.9 276 65.6
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-86 323.2 272 66.5
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-80 302.4 180 83.9
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-79 298.9 196 81.6
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-76 288.9 193 77.2
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-72 276.9 185 78.9
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-68 262.3 178 77.5
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-66 255.8 196 72.4
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.2e-66 255.4 171 81.3
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-66 255.0 261 59.8
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-65 253.4 149 81.9
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-64 248.4 198 67.2
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-61 240.7 140 85.7
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-51 207.6 138 78.3
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.6e-51 206.1 236 53.8
Nitab4.5_0000584g0070 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.0e-50 202.6 121 82.6
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.6e-45 184.9 139 74.1
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-42 177.9 99 88.9
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-39 166.4 202 49.5
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-39 166.0 154 62.3
Nitab4.5_0003079g0090 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.5e-38 162.5 127 65.4
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-35 152.5 92 83.7
Nitab4.5_0002870g0050 Nicotiana tabacum HOM05D006864 ORTHO05D286406 1.2e-33 147.9 103 70.9
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.8e-30 135.2 251 35.1
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.8e-30 135.2 254 34.6
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-29 134.0 300 32.3
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-29 134.0 252 33.3
Nitab4.5_0007360g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-29 133.7 102 72.5
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 3.0e-29 133.3 252 33.3
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-29 132.9 278 32.7
Nitab4.5_0000377g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-29 132.5 81 81.5
Nitab4.5_0007137g0050 Nicotiana tabacum HOM05D006864 ORTHO05D284446 5.8e-25 119.0 142 53.5
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-23 114.8 198 39.4
Nitab4.5_0000021g0980 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-23 114.4 64 81.2
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-22 110.5 202 37.1
Nitab4.5_0002944g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-21 107.8 65 78.5
Nitab4.5_0000021g0990 Nicotiana tabacum HOM05D006864 ORTHO05D282769 2.3e-21 107.1 138 50.7
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-21 106.3 187 36.9
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.6e-21 105.1 186 37.6
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-20 104.4 189 32.3
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-20 103.6 207 33.3
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-20 103.6 270 31.5
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-20 102.4 191 33.0
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 5.6e-20 102.4 311 31.2
Nitab4.5_0007137g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.3e-20 102.1 64 76.6
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-19 99.8 191 31.9
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-19 99.4 193 30.6
Nitab4.5_0000924g0030 Nicotiana tabacum HOM05D006864 ORTHO05D285280 4.0e-18 96.3 78 69.2
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-18 95.5 250 30.0
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.8e-18 95.5 194 30.9
Nitab4.5_0000103g0330 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.4e-17 92.8 55 78.2
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-17 92.4 249 28.5
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-16 91.3 181 34.3
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-16 91.3 175 34.9
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-16 90.5 202 31.2
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.9e-16 89.4 192 30.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.4e-16 89.0 186 33.3
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-15 88.2 191 30.9
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-15 87.0 193 31.1
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-15 86.3 206 29.1
Nitab4.5_0002695g0020 Nicotiana tabacum HOM05D006864 ORTHO05D285932 7.1e-15 85.5 85 57.6
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.2e-15 85.1 208 31.2
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-14 84.3 171 32.2
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-14 83.6 173 32.4
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 2.7e-14 83.6 328 25.3
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-14 83.2 102 45.1
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-14 82.8 137 37.2
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.8e-14 82.0 179 31.8
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.8e-14 82.0 202 29.7
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.3e-13 81.3 201 31.3
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-13 80.9 203 25.6
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-13 80.9 203 25.6
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-13 80.5 192 32.8
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-13 80.1 203 26.1
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-13 79.7 175 33.7
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-13 79.3 187 29.4
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.1e-13 79.3 191 29.8
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.1e-13 79.3 212 28.3
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.1e-12 78.2 189 30.7
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-12 77.8 189 29.1
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 4.3e-12 76.3 230 24.8
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.3e-12 75.5 89 43.8
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 9.5e-12 75.1 195 27.2
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.5e-12 75.1 189 29.1
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.5e-12 75.1 192 28.6
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.5e-12 75.1 192 29.2
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.1e-11 73.9 192 27.6
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.1e-11 73.9 191 27.2
Nitab4.5_0007904g0040 Nicotiana tabacum HOM05D006864 ORTHO05D000013 3.6e-11 73.2 152 34.2
Nitab4.5_0010494g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-11 72.8 134 32.8
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 8.1e-11 72.0 209 25.8
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 1.1e-10 71.6 126 33.3
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 1.1e-10 71.6 126 34.1
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-10 71.2 230 24.3
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-10 70.9 182 27.5
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.4e-10 70.5 188 29.8
Nitab4.5_0001329g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-10 70.5 105 37.1
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 2.4e-10 70.5 126 33.3
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.1e-10 70.1 83 43.4
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-10 69.7 85 41.2
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.0e-10 69.7 180 29.4
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-10 69.7 206 25.2
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.9e-10 68.6 180 29.4
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-10 68.6 203 27.1
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-09 68.2 193 26.4
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 68.2 206 28.2
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-09 68.2 206 28.2
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-09 67.4 99 38.4
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 2.0e-09 67.4 185 30.8
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-09 67.4 214 25.2
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 2.6e-09 67.0 313 24.0
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-09 67.0 206 28.2
Nitab4.5_0019527g0020 Nicotiana tabacum HOM05D006864 ORTHO05D000013 3.4e-09 66.6 32 96.9
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-09 66.2 83 38.6
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 5.8e-09 65.9 81 39.5
Nitab4.5_0006375g0060 Nicotiana tabacum HOM05D000017 ORTHO05D002765 7.6e-09 65.5 175 26.3
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 9.9e-09 65.1 212 25.9
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 9.9e-09 65.1 212 25.9
Nitab4.5_0006446g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.7e-08 64.3 151 27.2
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-08 64.3 212 25.9
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 2.2e-08 63.9 143 29.4
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-08 63.9 188 26.6
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 2.2e-08 63.9 203 25.1
Nitab4.5_0000576g0050 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.9e-08 63.5 200 27.0
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-08 63.5 214 24.8
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.9e-08 63.5 218 23.4
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-08 62.8 214 24.8
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-08 62.4 212 25.5
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 8.4e-08 62.0 196 24.0
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 8.4e-08 62.0 102 34.3
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 1.1e-07 61.6 80 37.5
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 61.2 81 33.3
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 61.2 81 33.3
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 61.2 226 21.2
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 61.2 81 33.3
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-07 61.2 81 33.3
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-07 61.2 124 32.3
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-07 60.8 164 29.9
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.2e-07 60.1 218 27.5
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 3.2e-07 60.1 96 33.3
Nitab4.5_0000649g0160 Nicotiana tabacum HOM05D009153 ORTHO05D011903 4.1e-07 59.7 130 33.1
Nitab4.5_0000906g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-07 59.7 125 28.8
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.1e-07 59.7 157 29.9
Nitab4.5_0012303g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-07 59.7 134 33.6
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 4.1e-07 59.7 80 33.8
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.4e-07 59.3 142 29.6
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-07 58.5 224 23.7
Nitab4.5_0002397g0060 Nicotiana tabacum HOM05D009153 ORTHO05D011903 9.2e-07 58.5 50 48.0
Sopen08g018780 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 57.4 51 52.9
Nitab4.5_0010096g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-06 56.6 85 43.5
Sopen05g009000 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-06 56.2 51 51.0
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.0e-06 55.8 64 45.3
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.0e-06 55.8 97 34.0
PGSC0003DMG400045123 Solanum tuberosum HOM05D000017 ORTHO05D000013 6.0e-06 55.8 77 39.0
Nitab4.5_0007528g0020 Nicotiana tabacum HOM05D009153 ORTHO05D011903 7.8e-06 55.5 48 50.0


User provided reference genes

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