Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 4.2e-75 284.6 147 100.0
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 6.1e-58 227.6 147 81.6
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 4.1e-54 214.9 135 81.5
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 9.1e-54 213.8 135 80.7
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.0e-53 212.6 135 80.0
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 7.0e-46 187.6 138 73.9
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.4e-43 179.9 125 83.2
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 3.9e-41 171.8 151 72.2
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 3.3e-32 142.1 153 59.5
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 4.4e-32 141.7 90 81.1
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.5e-32 141.0 152 57.9
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 3.5e-29 132.1 151 53.6
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 2.9e-28 129.0 154 55.8
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.5e-27 125.9 151 52.3
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 5.5e-27 124.8 117 62.4
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 9.4e-27 124.0 117 62.4
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 1.2e-26 123.6 152 57.2
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 4.7e-26 121.7 127 58.3
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 8.0e-26 120.9 145 55.9
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.0e-25 120.6 154 55.2
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.0e-25 120.6 154 55.2
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.0e-25 120.6 141 56.7
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.0e-25 120.6 152 55.3
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.8e-25 119.8 154 53.9
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 2.0e-24 116.3 155 55.5
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 1.3e-23 113.6 148 48.0
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 2.2e-23 112.8 149 51.7
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 1.1e-22 110.5 155 49.7
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.1e-22 108.6 137 53.3
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 4.1e-22 108.6 143 52.4
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 9.1e-22 107.5 141 52.5
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 1.2e-21 107.1 176 46.0
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.0e-21 106.3 145 52.4
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.0e-21 106.3 150 50.7
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 3.5e-21 105.5 147 48.3
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 3.5e-21 105.5 155 47.7
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 4.5e-21 105.1 152 51.3
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 4.5e-21 105.1 147 51.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 5.9e-21 104.8 148 46.6
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 5.9e-21 104.8 140 50.0
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 7.7e-21 104.4 150 46.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.3e-20 103.6 136 46.3
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 5.0e-20 101.7 156 48.1
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.5e-19 100.1 164 48.8
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.5e-19 100.1 137 49.6
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.9e-19 99.8 159 49.1
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 4.2e-19 98.6 139 49.6
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.2e-18 97.1 152 48.7
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.8e-18 95.9 149 48.3
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 6.1e-18 94.7 154 46.1
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.8e-17 93.2 160 46.2
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 2.3e-17 92.8 111 54.1
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 2.3e-17 92.8 79 65.8
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.3e-17 92.8 145 44.1
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.2e-17 91.7 145 50.3
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 6.8e-17 91.3 137 47.4
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 6.8e-17 91.3 134 47.0
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 8.9e-17 90.9 145 44.1
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 8.9e-17 90.9 149 43.6
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.2e-16 90.5 157 45.2
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.5e-16 90.1 144 49.3
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.6e-16 89.4 154 45.5
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 4.4e-16 88.6 153 45.1
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 7.5e-16 87.8 151 45.0
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 9.8e-16 87.4 83 62.7
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 2.8e-15 85.9 154 44.2
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 2.8e-15 85.9 136 45.6
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.7e-15 85.5 141 47.5
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 3.7e-15 85.5 140 45.7
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 3.7e-15 85.5 139 43.9
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.1e-14 82.4 144 47.9
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 4.1e-14 82.0 153 45.8
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 5.4e-14 81.6 138 46.4
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 5.4e-14 81.6 143 46.9
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 7.0e-14 81.3 140 42.9
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 7.0e-14 81.3 143 43.4
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 2.0e-13 79.7 152 46.1
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.7e-13 79.3 140 41.4
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 3.5e-13 79.0 150 41.3
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.9e-13 78.2 137 42.3
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 3.8e-12 75.5 146 46.6
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 3.8e-12 75.5 153 44.4
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 5.0e-12 75.1 153 45.1
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 5.0e-12 75.1 91 48.4
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.6e-12 74.7 146 46.6
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.6e-12 74.7 144 45.1
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 8.6e-12 74.3 144 45.1
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.1e-11 73.9 118 46.6
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.5e-11 73.6 154 39.6
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 2.5e-11 72.8 98 45.9
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 2.5e-11 72.8 140 43.6
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 3.3e-11 72.4 97 46.4
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 3.3e-11 72.4 154 45.5
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 4.3e-11 72.0 116 45.7
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 4.3e-11 72.0 153 37.9
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 7.3e-11 71.2 154 39.6
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 9.5e-11 70.9 155 42.6
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.2e-10 70.5 160 44.4
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-10 70.5 157 42.7
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.6e-10 70.1 80 57.5
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.6e-10 70.1 138 45.7
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 1.6e-10 70.1 148 41.9
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 2.1e-10 69.7 148 35.8
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 2.1e-10 69.7 145 42.8
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 2.8e-10 69.3 153 40.5
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 6.1e-10 68.2 153 40.5
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-09 67.4 152 38.8
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-09 67.4 153 40.5
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-09 67.4 152 38.8
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-09 67.4 153 40.5
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.0e-09 67.4 153 40.5
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 1.0e-09 67.4 152 38.8
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 1.0e-09 67.4 153 40.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-09 67.0 152 37.5
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 1.4e-09 67.0 151 43.7
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 3.1e-09 65.9 152 38.8
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 4.0e-09 65.5 151 37.7
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 4.0e-09 65.5 150 38.7
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 4.0e-09 65.5 150 38.7
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 6.8e-09 64.7 86 41.9
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 8.9e-09 64.3 156 40.4
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 3.4e-08 62.4 151 37.1
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 5.8e-08 61.6 151 37.1
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 7.5e-08 61.2 132 40.2
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.2e-07 59.7 158 39.2
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.9e-07 59.3 148 39.2
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 6.4e-07 58.2 146 39.0
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 1.1e-06 57.4 154 39.6
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 1.4e-06 57.0 158 34.2
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.2e-06 55.8 136 41.2
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 7.0e-06 54.7 125 36.8


User provided reference genes

Program Settings